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Thareja P, Chhillar RS, Dalal S, Simaiya S, Lilhore UK, Alroobaea R, Alsafyani M, Baqasah AM, Algarni S. Intelligence model on sequence-based prediction of PPI using AISSO deep concept with hyperparameter tuning process. Sci Rep 2024; 14:21797. [PMID: 39294330 PMCID: PMC11410825 DOI: 10.1038/s41598-024-72558-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Accepted: 09/09/2024] [Indexed: 09/20/2024] Open
Abstract
Protein-protein interaction (PPI) prediction is vital for interpreting biological activities. Even though many diverse sorts of data and machine learning approaches have been employed in PPI prediction, performance still has to be enhanced. As a result, we adopted an Aquilla Influenced Shark Smell (AISSO)-based hybrid prediction technique to construct a sequence-dependent PPI prediction model. This model has two stages of operation: feature extraction and prediction. Along with sequence-based and Gene Ontology features, unique features were produced in the feature extraction stage utilizing the improved semantic similarity technique, which may deliver reliable findings. These collected characteristics were then sent to the prediction step, and hybrid neural networks, such as the Improved Recurrent Neural Network and Deep Belief Networks, were used to predict the PPI using modified score level fusion. These neural networks' weight variables were adjusted utilizing a unique optimal methodology called Aquila Influenced Shark Smell (AISSO), and the outcomes showed that the developed model had attained an accuracy of around 88%, which is much better than the traditional methods; this model AISSO-based PPI prediction can provide precise and effective predictions.
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Affiliation(s)
- Preeti Thareja
- DCSA, Maharshi Dayanand University, Rohtak, Haryana, India
| | | | - Sandeep Dalal
- DCSA, Maharshi Dayanand University, Rohtak, Haryana, India
| | - Sarita Simaiya
- Arba Minch University, Arba Minch, Ethiopia.
- Department of Computer Science and Engineering, Galgotias University, Greater Noida, UP, India.
| | - Umesh Kumar Lilhore
- Department of Computer Science and Engineering, Galgotias University, Greater Noida, UP, India
| | - Roobaea Alroobaea
- Department of Computer Science, College of Computers and Information Technology, Taif University, P. O. Box 11099, 21944, Taif, Saudi Arabia
| | - Majed Alsafyani
- Department of Computer Science, College of Computers and Information Technology, Taif University, P. O. Box 11099, 21944, Taif, Saudi Arabia
| | - Abdullah M Baqasah
- Department of Information Technology, College of Computers and Information Technology, Taif University, P. O. Box 11099, Taif, 21944, Saudi Arabia
| | - Sultan Algarni
- Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, 21589, Jeddah, Saudi Arabia
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Chakraborty C, Dash* TK, Panda G, Solanki SS. Phase-based Cepstral features for Automatic Speech Emotion Recognition of Low Resource Indian languages. ACM T ASIAN LOW-RESO 2022. [DOI: 10.1145/3563944] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Abstract
Automatic speech emotion recognition (SER) is a crucial task in communication-based systems, where feature extraction plays an important role. Recently, a lot of SER models have been developed and implemented successfully in English and other western languages. However, the performance of the traditional Indian languages in SER is not up to the mark. This problem of SER in low-resource Indian languages mainly the Bengali language is dealt with in this paper. In the first step, the relevant phase-based information from the speech signal is extracted in the form of phase-based cepstral features (PBCC) using cepstral, and statistical analysis. Several pre-processing techniques are combined with features extraction and gradient boosting machine-based classifier in the proposed SER model. Finally, the evaluation and comparison of simulation results on speaker-dependent, speaker-independent tests are performed using multiple language datasets, and independent test sets. It is observed that the proposed PBCC features-based model is performing well with an average of 96% emotion recognition efficiency as compared to standard methods.
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Affiliation(s)
- Chinmay Chakraborty
- Electronics and Communication Engineering, Birla Institute of Technology Mesra, India
| | - Tusar Kanti Dash*
- Electronics and Communications Engineering, C V Raman Global University, Bhubaneswar, India
| | - Ganapati Panda
- Electronics and Communications Engineering, C V Raman Global University, Bhubaneswar, India
| | - Sandeep Singh Solanki
- Electronics and Communication Engineering, Birla Institute of Technology Mesra, India
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Logistic Model and Gradient Boosting Machine Model for Physical Therapy of Lumbar Disc Herniation. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2022; 2022:4799248. [PMID: 35602348 PMCID: PMC9117053 DOI: 10.1155/2022/4799248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Revised: 03/26/2022] [Accepted: 04/19/2022] [Indexed: 11/17/2022]
Abstract
Objective. Physical therapy is a common clinical treatment for patients with lumbar disc herniation. The study is aimed at exploring the feasibility of mathematical expression and curative effect prediction of physical therapy in patients with lumbar disc herniation using a logistic model and gradient boosting machine (GBM). Methods. A total of 142 patients with lumbar disc herniation were treated with physical therapy. The pain was evaluated by the visual analogue scale (VAS) before each treatment. The logistic model was used to conduct a global regression analysis on patients with lumbar disc herniation. The final results of the whole course of treatment were predicted by the measured values of 2-9 times of treatment. The GBM model was used to predict and analyze the curative effect of physical therapy. Results. The mathematical expression ability of the logistic regression model for patients with lumbar disc herniation undergoing physical therapy was sufficient, and the global determination coefficient was 0.721. The results would be better for more than five measurements. The AUC of GBM mode logistic regression analysis was 0.936 and 0.883, and the prediction effect is statistically significant. Conclusion. Both the logistic and GBM model can fully express the changes in patients with lumbar disc herniation during physical therapy.
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