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Méndez V, Sepúlveda M, Izquierdo-Fiallo K, Macaya CC, Esparza T, Báez-Matus X, Durán RE, Levicán G, Seeger M. Surfing in the storm: how Paraburkholderia xenovorans thrives under stress during biodegradation of toxic aromatic compounds and other stressors. FEMS Microbiol Rev 2025; 49:fuaf021. [PMID: 40388301 PMCID: PMC12117332 DOI: 10.1093/femsre/fuaf021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Revised: 05/07/2025] [Accepted: 05/15/2025] [Indexed: 05/21/2025] Open
Abstract
The adaptive mechanisms of Burkholderiales during the catabolism of aromatic compounds and abiotic stress are crucial for their fitness and performance. The aims of this report are to review the bacterial adaptation mechanisms to aromatic compounds, oxidative stress, and environmental stressful conditions, focusing on the model aromatic-degrading Paraburkholderia xenovorans LB400, other Burkholderiales, and relevant degrading bacteria. These mechanisms include (i) the stress response during aromatic degradation, (ii) the oxidative stress response to aromatic compounds, (iii) the metabolic adaptation to oxidative stress, (iv) the osmoadaptation to saline stress, (v) the synthesis of siderophore during iron limitation, (vi) the proteostasis network, which plays a crucial role in cellular function maintenance, and (vii) the modification of cellular membranes, morphology, and bacterial lifestyle. Remarkably, we include, for the first time, novel genomic analyses on proteostasis networks, carbon metabolism modulation, and the synthesis of stress-related molecules in P. xenovorans. We analyzed these metabolic features in silico to gain insights into the adaptive strategies of P. xenovorans to challenging environmental conditions. Understanding how to enhance bacterial stress responses can lead to the selection of more robust strains capable of thriving in polluted environments, which is critical for improving biodegradation and bioremediation strategies.
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Affiliation(s)
- Valentina Méndez
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Mario Sepúlveda
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Katherin Izquierdo-Fiallo
- Department of Biology, Faculty of Chemistry and Biology, Universidad de Santiago de Chile, Avenida Libertador Bernardo O'Higgins 3363, Santiago, Chile
| | - Constanza C Macaya
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Teresa Esparza
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Ximena Báez-Matus
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Roberto E Durán
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
| | - Gloria Levicán
- Department of Biology, Faculty of Chemistry and Biology, Universidad de Santiago de Chile, Avenida Libertador Bernardo O'Higgins 3363, Santiago, Chile
| | - Michael Seeger
- Molecular Microbiology and Environmental Biotechnology, Department of Chemistry & Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, 2390123 Valparaíso, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, 2390123 Valparaíso, Chile
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