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Zhao P, Liu Z. Influence on Sample Determination for Deep Learning Electromagnetic Tomography. SENSORS (BASEL, SWITZERLAND) 2024; 24:2452. [PMID: 38676069 PMCID: PMC11054014 DOI: 10.3390/s24082452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 03/25/2024] [Accepted: 04/10/2024] [Indexed: 04/28/2024]
Abstract
Deep learning (DL) has been frequently applied in the image reconstruction of electromagnetic tomography (EMT) in recent years. It offers the potential to achieve higher-quality image reconstruction. Among these, research on samples is relatively scarce. Samples are the cornerstone for both large and small models, which is easy to ignore. In this paper, a deep learning electromagnetic tomography (DL-EMT) model with nine elements is established. Complete simulation and experimental samples are obtained based on this model. On the sample sets, the reconstruction quality is observed by adjusting the size and configuration of the training set. The Mann-Whitney U test shows that beyond a certain point, the addition of more samples to the training data fed into the deep learning network does not result in an obvious improvement statistically in the quality of the reconstructed images. This paper proposes a CC-building method for optimizing a sample set. This method is based on the Pearson correlation coefficient calculation, aiming to establish a more effective sample base for DL-EMT image reconstruction. The statistical analysis shows that the CC-building method can significantly improve the image reconstruction effect in a small and moderate sample size. This method is also validated by experiments.
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Affiliation(s)
| | - Ze Liu
- The School of Automation and Intelligence, Beijing Jiaotong University, Beijing 100044, China;
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Rixen J, Eliasson B, Lyra S, Leonhardt S. Shape analysis of training data for neural networks in Electrical Impedance Tomography. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-4. [PMID: 38082893 DOI: 10.1109/embc40787.2023.10340254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
Electrical Impedance Tomography (EIT) is a cost-effective and fast way to visualize dielectric properties of the human body, through the injection of alternating currents and measurement of the resulting potential on the bodies surface. However, this comes at the cost of low resolution as EIT is a non-linear ill-posed inverse problem. Recently Deep Learning methods have gained the interest in this field, as they provide a way to mimic non-linear functions. Most of the approaches focus on the structure of the Artificial Neural Networks (ANNs), while only glancing over the used training data. However, the structure of the training data is of great importance, as it needs to be simulated. In this work, we analyze the effect of basic shapes to be included as targets in the training data set. We compared inclusions of ellipsoids, cubes and octahedra as training data for ANNs in terms of reconstruction quality. For that, we used the well-established GREIT figures of merit on laboratory tank measurements. We found that ellipsoids resulted in the best reconstruction quality of EIT images. This shows that the choice of simulation data has an impact on the ANN reconstruction quality.Clinical relevance- This work helps to improve time independent EIT reconstruction, which in turn allows for extraction of time independent features of e.g., the lung.
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Yang D, Li S, Zhao Y, Xu B, Tian W. An EIT image reconstruction method based on DenseNet with multi-scale convolution. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:7633-7660. [PMID: 37161165 DOI: 10.3934/mbe.2023329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Electrical impedance tomography (EIT) is an imaging technique that non-invasively acquires the electrical conductivity distribution within a field. The ill-posed and nonlinear nature of the image reconstruction process results in lower quality of the obtained images. To solve this problem, an EIT image reconstruction method based on DenseNet with multi-scale convolution named MS-DenseNet is proposed. In the proposed method, three different multi-scale convolutional dense blocks are incorporated to replace the conventional dense blocks; they are placed in parallel to improve the generalization ability of the network. The connection layer between dense blocks adopts a hybrid pooling structure, which reduces the loss of information in the traditional pooling process. A learning rate setting achieves reduction in two stages and optimizes the fitting ability of the network. The input of the constructed network is the boundary voltage data, and the output is the conductivity distribution of the imaging area. The network was trained and tested on a simulated dataset, and it was further tested using actual measurement data. The images reconstructed via this method were evaluated by employing root mean square error, structural similarity index measure, mean absolute error and image correlation coefficient in comparison with conventional DenseNet and Gauss-Newton. The results show that the method improves the artifact and edge blur problems, achieves higher values on the image metrics and improves the EIT image quality.
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Affiliation(s)
- Dan Yang
- Key Laboratory of Data Analytics and Optimization for Smart Industry, Ministry of Education, Northeastern University, Shenyang 110819, China
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China
| | - Shijun Li
- Key Laboratory of Data Analytics and Optimization for Smart Industry, Ministry of Education, Northeastern University, Shenyang 110819, China
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China
| | - Yuyu Zhao
- Key Laboratory of Data Analytics and Optimization for Smart Industry, Ministry of Education, Northeastern University, Shenyang 110819, China
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China
| | - Bin Xu
- School of Computer Science and Engineering, Northeastern University, Shenyang 110169, China
| | - Wenxu Tian
- Key Laboratory of Data Analytics and Optimization for Smart Industry, Ministry of Education, Northeastern University, Shenyang 110819, China
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Zhang T, Tian X, Liu X, Ye J, Fu F, Shi X, Liu R, Xu C. Advances of deep learning in electrical impedance tomography image reconstruction. Front Bioeng Biotechnol 2022; 10:1019531. [PMID: 36588934 PMCID: PMC9794741 DOI: 10.3389/fbioe.2022.1019531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 12/02/2022] [Indexed: 12/15/2022] Open
Abstract
Electrical impedance tomography (EIT) has been widely used in biomedical research because of its advantages of real-time imaging and nature of being non-invasive and radiation-free. Additionally, it can reconstruct the distribution or changes in electrical properties in the sensing area. Recently, with the significant advancements in the use of deep learning in intelligent medical imaging, EIT image reconstruction based on deep learning has received considerable attention. This study introduces the basic principles of EIT and summarizes the application progress of deep learning in EIT image reconstruction with regards to three aspects: a single network reconstruction, deep learning combined with traditional algorithm reconstruction, and multiple network hybrid reconstruction. In future, optimizing the datasets may be the main challenge in applying deep learning for EIT image reconstruction. Adopting a better network structure, focusing on the joint reconstruction of EIT and traditional algorithms, and using multimodal deep learning-based EIT may be the solution to existing problems. In general, deep learning offers a fresh approach for improving the performance of EIT image reconstruction and could be the foundation for building an intelligent integrated EIT diagnostic system in the future.
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Affiliation(s)
- Tao Zhang
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China,Drug and Instrument Supervision and Inspection Station, Xining Joint Logistics Support Center, Lanzhou, China
| | - Xiang Tian
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - XueChao Liu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - JianAn Ye
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - Feng Fu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - XueTao Shi
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - RuiGang Liu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China
| | - CanHua Xu
- Department of Biomedical Engineering, The Fourth Military Medical University, Xi’an, China,Shaanxi Key Laboratory for Bioelectromagnetic Detection and Intelligent Perception, Xi’an, China,*Correspondence: CanHua Xu,
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Shi Y, Yang Z, Xie F, Ren S, Xu S. The Research Progress of Electrical Impedance Tomography for Lung Monitoring. Front Bioeng Biotechnol 2021; 9:726652. [PMID: 34660553 PMCID: PMC8517404 DOI: 10.3389/fbioe.2021.726652] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Accepted: 08/09/2021] [Indexed: 01/16/2023] Open
Abstract
Medical imaging can intuitively show people the internal structure, morphological information, and organ functions of the organism, which is one of the most important inspection methods in clinical medical diagnosis. Currently used medical imaging methods can only be applied to some diagnostic occasions after qualitative lesions have been generated, and the general imaging technology is usually accompanied by radiation and other conditions. However, electrical impedance tomography has the advantages of being noninvasive and non-radiative. EIT (Electrical Impedance Tomography) is also widely used in the early diagnosis and treatment of some diseases because of these advantages. At present, EIT is relatively mature and more and more image reconstruction algorithms are used to improve imaging resolution. Hardware technology is also developing rapidly, and the accuracy of data collection and processing is continuously improving. In terms of clinical application, EIT has also been used for pathological treatment of lungs, the brain, and the bladder. In the future, EIT has a good application prospect in the medical field, which can meet the needs of real-time, long-term monitoring and early diagnosis. Aiming at the application of EIT in the treatment of lung pathology, this article reviews the research progress of EIT, image reconstruction algorithms, hardware system design, and clinical applications used in the treatment of lung diseases. Through the research and introduction of several core components of EIT technology, it clarifies the characteristics of EIT system complexity and its solutions, provides research ideas for subsequent research, and once again verifies the broad development prospects of EIT technology in the future.
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Affiliation(s)
- Yan Shi
- The School of Automation Science and Electrical Engineering, Beihang University, Beijing, China
| | - ZhiGuo Yang
- The School of Automation Science and Electrical Engineering, Beihang University, Beijing, China
| | - Fei Xie
- Department of Pulmonary and Critical Care Medicine, Chinese PLA General Hospital, Beijing, China
| | - Shuai Ren
- The School of Automation Science and Electrical Engineering, Beihang University, Beijing, China
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, Hangzhou, China
| | - ShaoFeng Xu
- The School of Automation Science and Electrical Engineering, Beihang University, Beijing, China
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Lin Z, Guo R, Zhang K, Li M, Yang F, Xu And S, Abubakar A. Neural network-based supervised descent method for 2D electrical impedance tomography. Physiol Meas 2020; 41:074003. [PMID: 32480384 DOI: 10.1088/1361-6579/ab9871] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE In this work, we study the application of the neural network-based supervised descent method (NN-SDM) for 2D electrical impedance tomography. APPROACH The NN-SDM contains two stages: offline training and online prediction. In the offline stage, neural networks are iteratively applied to learn a sequence of descent directions for minimizing the objective function, where the training data set is generated in advance according to prior information or historical data. In the online stage, the trained neural networks are directly used to predict the descent directions. MAIN RESULTS Numerical and experimental results are reported to assess the efficiency and accuracy of the NN-SDM for both model-based and pixel-based inversions. In addition, the performance of the NN-SDM is compared with the linear SDM (LSDM), an end-to-end neural network (E2E-NN) and the Gauss-Newton (GN) method. The results demonstrate that the NN-SDM achieves faster convergence than the LSDM and GN method, and achieves a stronger generalization ability than the E2E-NN. SIGNIFICANCE The NN-SDM combines the strong non-linear fitting ability of the neural network and good generalization capability of the supervised descent method (SDM), which also provides good flexibility to incorporate prior information and accelerates the convergence of iteration.
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Affiliation(s)
- Zhichao Lin
- State Key Laboratory on Microwave and Digital Communications, Beijing National Research Center for Information Science and Technology (BNRist), Department of Electronic Engineering, Tsinghua University, Beijing 100084, People's Republic of China
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