Statistical approach for the detection of motion/noise artifacts in Photoplethysmogram

Automated Multi-Wavelength Quality Assessment of Photoplethysmography Signals Using Modulation Spectrum Shape Features

Photoplethysmography (PPG) is used to measure blood volume changes in the microvascular bed of tissue. Information about these changes along time can be used for estimation of various physiological parameters, such as heart rate variability, arterial stiffness, and blood pressure, to name a few. As a result, PPG has become a popular biological modality and is widely used in wearable health devices. However, accurate measurement of various physiological parameters requires good-quality PPG signals. Therefore, various signal quality indexes (SQIs) for PPG signals have been proposed. These metrics have usually been based on statistical, frequency, and/or template analyses. The modulation spectrogram representation, however, captures the second-order periodicities of a signal and has been shown to provide useful quality cues for electrocardiograms and speech signals. In this work, we propose a new PPG quality metric based on properties of the modulation spectrum. The proposed metric is tested using data collected from subjects while they performed various activity tasks contaminating the PPG signals. Experiments on this multi-wavelength PPG dataset show the combination of proposed and benchmark measures significantly outperforming several benchmark SQIs with improvements of 21.3% BACC (balanced accuracy) for green, 21.6% BACC for red, and 19.0% BACC for infrared wavelengths, respectively, for PPG quality detection tasks. The proposed metrics also generalize for cross-wavelength PPG quality detection tasks.

A Sliding Scale Signal Quality Metric of Photoplethysmography Applicable to Measuring Heart Rate across Clinical Contexts with Chest Mounting as a Case Study

Photoplethysmography (PPG) signal quality as a proxy for accuracy in heart rate (HR) measurement is useful in various public health contexts, ranging from short-term clinical diagnostics to free-living health behavior surveillance studies that inform public health policy. Each context has a different tolerance for acceptable signal quality, and it is reductive to expect a single threshold to meet the needs across all contexts. In this study, we propose two different metrics as sliding scales of PPG signal quality and assess their association with accuracy of HR measures compared to a ground truth electrocardiogram (ECG) measurement.

METHODS

We used two publicly available PPG datasets (BUT PPG and Troika) to test if our signal quality metrics could identify poor signal quality compared to gold standard visual inspection. To aid interpretation of the sliding scale metrics, we used ROC curves and Kappa values to calculate guideline cut points and evaluate agreement, respectively. We then used the Troika dataset and an original dataset of PPG data collected from the chest to examine the association between continuous metrics of signal quality and HR accuracy. PPG-based HR estimates were compared with reference HR estimates using the mean absolute error (MAE) and the root-mean-square error (RMSE). Point biserial correlations were used to examine the association between binary signal quality and HR error metrics (MAE and RMSE).

RESULTS

ROC analysis from the BUT PPG data revealed that the AUC was 0.758 (95% CI 0.624 to 0.892) for signal quality metrics of STD-width and 0.741 (95% CI 0.589 to 0.883) for self-consistency. There was a significant correlation between criterion poor signal quality and signal quality metrics in both Troika and originally collected data. Signal quality was highly correlated with HR accuracy (MAE and RMSE, respectively) between PPG and ground truth ECG.

CONCLUSION

This proof-of-concept work demonstrates an effective approach for assessing signal quality and demonstrates the effect of poor signal quality on HR measurement. Our continuous signal quality metrics allow estimations of uncertainties in other emergent metrics, such as energy expenditure that relies on multiple independent biometrics. This open-source approach increases the availability and applicability of our work in public health settings.

Artifacts classification and apnea events detection in neck photoplethysmography signals

The novel pulse oximetry measurement site of the neck is a promising location for multi-modal physiological monitoring. Specifically, in the context of respiratory monitoring, in which it is important to have direct information about airflow. The neck makes this possible, in contrast to common photoplethysmography (PPG) sensing sites. However, this PPG signal is susceptible to artifacts that critically impair the signal quality. To fully exploit neck PPG for reliable physiological parameters extraction and apneas monitoring, this paper aims to develop two classification algorithms for artifacts and apnea detection. Features from the time, correlogram, and frequency domains were extracted. Two SVM classifiers with RBF kernels were trained for different window (W) lengths and thresholds (Thd) of corruption. For artifacts classification, the maximum performance was attained for the parameters combination of [W = 6s-Thd= 20%], with an average accuracy= 85.84%(ACC), sensitivity= 85.43%(SE) and specificity= 86.26%(SP). For apnea detection, the model [W = 10s-Thd= 50%] maximized all the performance metrics significantly (ACC= 88.25%, SE= 89.03%, SP= 87.42%). The findings of this proof of concept are significant for denoising novel neck PPG signals, and demonstrate, for the first time, that it is possible to promptly detect apnea events from neck PPG signals in an instantaneous manner. This could make a big impact in crucial real-time applications, like devices to prevent sudden-unexpected-death-in-epilepsy (SUDEP).

vital_sqi: A Python package for physiological signal quality control

Electrocardiogram (ECG) and photoplethysmogram (PPG) are commonly used to determine the vital signs of heart rate, respiratory rate, and oxygen saturation in patient monitoring. In addition to simple observation of those summarized indexes, waveform signals can be analyzed to provide deeper insights into disease pathophysiology and support clinical decisions. Such data, generated from continuous patient monitoring from both conventional bedside and low-cost wearable monitors, are increasingly accessible. However, the recorded waveforms suffer from considerable noise and artifacts and, hence, are not necessarily used prior to certain quality control (QC) measures, especially by those with limited programming experience. Various signal quality indices (SQIs) have been proposed to indicate signal quality. To facilitate and harmonize a wider usage of SQIs in practice, we present a Python package, named vital_sqi, which provides a unified interface to the state-of-the-art SQIs for ECG and PPG signals. The vital_sqi package provides with seven different peak detectors and access to more than 70 SQIs by using different settings. The vital_sqi package is designed with pipelines and graphical user interfaces to enable users of various programming fluency to use the package. Multiple SQI extraction pipelines can take the PPG and ECG waveforms and generate a bespoke SQI table. As these SQI scores represent the signal features, they can be input in any quality classifier. The package provides functions to build simple rule-based decision systems for signal segment quality classification using user-defined SQI thresholds. An experiment with a carefully annotated PPG dataset suggests thresholds for relevant PPG SQIs.

Optimized Signal Quality Assessment for Photoplethysmogram Signals Using Feature Selection

OBJECTIVE

With the increasing use of wearable healthcare devices for remote patient monitoring, reliable signal quality assessment (SQA) is required to ensure the high accuracy of interpretation and diagnosis on the recorded data from patients. Photoplethysmographic (PPG) signals non-invasively measured by wearable devices are extensively used to provide information about the cardiovascular system and its associated diseases. In this study, we propose an approach to optimize the quality assessment of the PPG signals.

METHODS

We used an ensemble-based feature selection scheme to enhance the prediction performance of the classification model to assess the quality of the PPG signals. Our approach for feature and subset size selection yielded the best-suited feature subset, which was optimized to differentiate between the clean and artifact corrupted PPG segments.

CONCLUSION

A high discriminatory power was achieved between two classes on the test data by the proposed feature selection approach, which led to strong performance on all dependent and independent test datasets. We achieved accuracy, sensitivity, and specificity rates of higher than 0.93, 0.89, and 0.97, respectively, for dependent test datasets, independent of heartbeat type, i.e., atrial fibrillation (AF) or non-AF data including normal sinus rhythm (NSR), premature atrial contraction (PAC), and premature ventricular contraction (PVC). For independent test datasets, accuracy, sensitivity, and specificity rates were greater than 0.93, 0.89, and 0.97, respectively, on PPG data recorded from AF and non-AF subjects. These results were found to be more accurate than those of all of the contemporary methods cited in this work.

SIGNIFICANCE

As the results illustrate, the advantage of our proposed scheme is its robustness against dynamic variations in the PPG signal during long-term 14-day recordings accompanied with different types of physical activities and a diverse range of fluctuations and waveforms caused by different individual hemodynamic characteristics, and various types of recording devices. This robustness instills confidence in the application of the algorithm to various kinds of wearable devices as a reliable PPG signal quality assessment approach.

Design of a Realtime Photoplethysmogram Signal Quality Checker for Wearables and Edge Computing

Photoplethysmogram (PPG) signal is extensively used for deducing health parameters of patients in order to infer about physiological conditions of heart, blood pressure, respiratory patterns, and so on. Such analysis and estimations can be done accurately only on high quality PPG signals with very minimal artifacts. PPG signals collected from fitness grade and smart phone scenarios are prone to muscle artifacts and hence there is a need to assess the signal quality before using the signal. Although there are approaches available in the realm of machine learning and deep learning, they are computationally expensive and may not be suitable for a wearable or edge computing scenario. In this paper, we propose the design of a quality checker to check the quality of the signal that can be directly implemented on edge devices like smartwatch. The algorithm is tested on PPG data collected from wearable, ICU and medical grade devices. In the wearable scenario where the noise levels are very high, our algorithm has performed significantly better with a F_score of over 0.92. Further we show that by applying the proposed quality checker, the accuracy of the computed heart rate from a smart phone PPG-application significantly improves.

Evaluating the Empatica E4 Derived Heart Rate and Heart Rate Variability Measures in Older Men and Women

Wearable heart rate monitors offer a cost-effective way of non-invasive, long-term monitoring of cardiac health. Validation of wearable technologies in an older populations is essential for evaluating their effectiveness during deployment in healthcare settings. To this end, we evaluated the validity of heart rate measures from a wearable device, Empatica E4, and compared them to the electrocardiography (ECG). We collected E4 data simultaneously with ECG in thirty-five older men and women during an overnight sleep recording in the laboratory. We propose a robust approach to resolve the missing inter-beat interval (IBI) data and improve the quality of E4 derived measures. We also evaluated the concordance of heart rate (HR) and heart rate variability (HRV) measures with ECG. The results demonstrate that the automatic E4 heart rate measures capture long-term HRV whilst the short-term metrics are affected by missing IBIs. Our approach provides an effective way to resolve the missing IBI issue of E4 and extracts reliable heart rate measures that are concordant with ECG. Clinical Relevance- This work discusses data quality challenges in heart rate data acquired by wearables and provides an efficient and reliable approach for extracting heart rate measures from the E4 wearable device and validates the metrics in older adults.

Detection and Monitoring of Viral Infections via Wearable Devices and Biometric Data

Mounting clinical evidence suggests that viral infections can lead to detectable changes in an individual's normal physiologic and behavioral metrics, including heart and respiration rates, heart rate variability, temperature, activity, and sleep prior to symptom onset, potentially even in asymptomatic individuals. While the ability of wearable devices to detect viral infections in a real-world setting has yet to be proven, multiple recent studies have established that individual, continuous data from a range of biometric monitoring technologies can be easily acquired and that through the use of machine learning techniques, physiological signals and warning signs can be identified. In this review, we highlight the existing knowledge base supporting the potential for widespread implementation of biometric data to address existing gaps in the diagnosis and treatment of viral illnesses, with a particular focus on the many important lessons learned from the coronavirus disease 2019 pandemic.

Photoplethysmography-Based Respiratory Rate Estimation Algorithm for Health Monitoring Applications

Purpose

Respiratory rate can provide auxiliary information on the physiological changes within the human body, such as physical and emotional stress. In a clinical setup, the abnormal respiratory rate can be indicative of the deterioration of the patient's condition. Most of the existing algorithms for the estimation of respiratory rate using photoplethysmography (PPG) are sensitive to external noise and may require the selection of certain algorithm-specific parameters, through the trial-and-error method.

Methods

This paper proposes a new algorithm to estimate the respiratory rate using a photoplethysmography sensor signal for health monitoring. The algorithm is resistant to signal loss and can handle low-quality signals from the sensor. It combines selective windowing, preprocessing and signal conditioning, modified Welch filtering and postprocessing to achieve high accuracy and robustness to noise.

Results

The Mean Absolute Error and the Root Mean Square Error of the proposed algorithm, with the optimal signal window size, are determined to be 2.05 breaths count per minute and 2.47 breaths count per minute, respectively, when tested on a publicly available dataset. These results present a significant improvement in accuracy over previously reported methods. The proposed algorithm achieved comparable results to the existing algorithms in the literature on the BIDMC dataset (containing data of 53 subjects, each recorded for 8 min) for other signal window sizes.

Conclusion

The results endorse that integration of the proposed algorithm to a commercially available pulse oximetry device would expand its functionality from the measurement of oxygen saturation level and heart rate to the continuous measurement of the respiratory rate with good efficiency at home and in a clinical setting.

Supplementary Information

The online version contains supplementary material available at 10.1007/s40846-022-00700-z.

Robustness of electrocardiogram signal quality indices

Electrocardiogram (ECG) signal quality indices (SQIs) are essential for improving diagnostic accuracy and reliability of ECG analysis systems. In various practical applications, the ECG signals are corrupted by different types of noise. These corrupted ECG signals often provide insufficient and incorrect information regarding a patient's health. To solve this problem, signal quality measurements should be made before an ECG signal is used for decision-making. This paper investigates the robustness of existing popular statistical signal quality indices (SSQIs): relative power of QRS complex (SQIp), skewness (SQIskew), signal-to-noise ratio (SQIsnr), higher order statistics SQI (SQIhos) and peakedness of kurtosis (SQIkur). We analysed the robustness of these SSQIs against different window sizes across diverse datasets. Results showed that the performance of SSQIs considerably fluctuates against varying datasets, whereas the impact of varying window sizes was minimal. This fluctuation occurred due to the use of a static threshold value for classifying noise-free ECG signals from the raw ECG signals. Another drawback of these SSQIs is the bias towards noise-free ECG signals, that limits their usefulness in clinical settings. In summary, the fixed threshold-based SSQIs cannot be used as a robust noise detection system. In order to solve this fixed threshold problem, other techniques can be developed using adaptive thresholds and machine-learning mechanisms.

Multiclass Arrhythmia Detection and Classification From Photoplethysmography Signals Using a Deep Convolutional Neural Network

Background

Studies have reported the use of photoplethysmography signals to detect atrial fibrillation; however, the use of photoplethysmography signals in classifying multiclass arrhythmias has rarely been reported. Our study investigated the feasibility of using photoplethysmography signals and a deep convolutional neural network to classify multiclass arrhythmia types.

Methods and Results

ECG and photoplethysmography signals were collected simultaneously from a group of patients who underwent radiofrequency ablation for arrhythmias. A deep convolutional neural network was developed to classify multiple rhythms based on 10‐second photoplethysmography waveforms. Classification performance was evaluated by calculating the area under the microaverage receiver operating characteristic curve, overall accuracy, sensitivity, specificity, and positive and negative predictive values against annotations on the rhythm of arrhythmias provided by 2 cardiologists consulting the ECG results. A total of 228 patients were included; 118 217 pairs of 10‐second photoplethysmography and ECG waveforms were used. When validated against an independent test data set (23 384 photoplethysmography waveforms from 45 patients), the DCNN achieved an overall accuracy of 85.0% for 6 rhythm types (sinus rhythm, premature ventricular contraction, premature atrial contraction, ventricular tachycardia, supraventricular tachycardia, and atrial fibrillation); the microaverage area under the microaverage receiver operating characteristic curve was 0.978; the average sensitivity, specificity, and positive and negative predictive values were 75.8%, 96.9%, 75.2%, and 97.0%, respectively.

Conclusions

This study demonstrated the feasibility of classifying multiclass arrhythmias from photoplethysmography signals using deep learning techniques. The approach is attractive for population‐based screening and may hold promise for the long‐term surveillance and management of arrhythmia.

Registration

URL: www.chictr.org.cn. Identifier: ChiCTR2000031170.

Photoplethysmogram Analysis and Applications: An Integrative Review

Beyond its use in a clinical environment, photoplethysmogram (PPG) is increasingly used for measuring the physiological state of an individual in daily life. This review aims to examine existing research on photoplethysmogram concerning its generation mechanisms, measurement principles, clinical applications, noise definition, pre-processing techniques, feature detection techniques, and post-processing techniques for photoplethysmogram processing, especially from an engineering point of view. We performed an extensive search with the PubMed, Google Scholar, Institute of Electrical and Electronics Engineers (IEEE), ScienceDirect, and Web of Science databases. Exclusion conditions did not include the year of publication, but articles not published in English were excluded. Based on 118 articles, we identified four main topics of enabling PPG: (A) PPG waveform, (B) PPG features and clinical applications including basic features based on the original PPG waveform, combined features of PPG, and derivative features of PPG, (C) PPG noise including motion artifact baseline wandering and hypoperfusion, and (D) PPG signal processing including PPG preprocessing, PPG peak detection, and signal quality index. The application field of photoplethysmogram has been extending from the clinical to the mobile environment. Although there is no standardized pre-processing pipeline for PPG signal processing, as PPG data are acquired and accumulated in various ways, the recently proposed machine learning-based method is expected to offer a promising solution.

Identification of Ictal Tachycardia in Focal Motor- and Non-Motor Seizures by Means of a Wearable PPG Sensor

Photoplethysmography (PPG) as an additional biosignal for a seizure detector has been underutilized so far, which is possibly due to its susceptibility to motion artifacts. We investigated 62 focal seizures from 28 patients with electrocardiography-based evidence of ictal tachycardia (IT). Seizures were divided into subgroups: those without epileptic movements and those with epileptic movements not affecting and affecting the extremities. PPG-based heart rate (HR) derived from a wrist-worn device was calculated for sections with high signal quality, which were identified using spectral entropy. Overall, IT based on PPG was identified in 37 of 62 (60%) seizures (9/19, 7/8, and 21/35 in the three groups, respectively) and could be found prior to the onset of epileptic movements affecting the extremities in 14/21 seizures. In 30/37 seizures, PPG-based IT was in good temporal agreement (<10 s) with ECG-based IT, with an average delay of 5.0 s relative to EEG onset. In summary, we observed that the identification of IT by means of a wearable PPG sensor is possible not only for non-motor seizures but also in motor seizures, which is due to the early manifestation of IT in a relevant subset of focal seizures. However, both spontaneous and epileptic movements can impair PPG-based seizure detection.

Sources of Inaccuracy in Photoplethysmography for Continuous Cardiovascular Monitoring

Photoplethysmography (PPG) is a low-cost, noninvasive optical technique that uses change in light transmission with changes in blood volume within tissue to provide information for cardiovascular health and fitness. As remote health and wearable medical devices become more prevalent, PPG devices are being developed as part of wearable systems to monitor parameters such as heart rate (HR) that do not require complex analysis of the PPG waveform. However, complex analyses of the PPG waveform yield valuable clinical information, such as: blood pressure, respiratory information, sympathetic nervous system activity, and heart rate variability. Systems aiming to derive such complex parameters do not always account for realistic sources of noise, as testing is performed within controlled parameter spaces. A wearable monitoring tool to be used beyond fitness and heart rate must account for noise sources originating from individual patient variations (e.g., skin tone, obesity, age, and gender), physiology (e.g., respiration, venous pulsation, body site of measurement, and body temperature), and external perturbations of the device itself (e.g., motion artifact, ambient light, and applied pressure to the skin). Here, we present a comprehensive review of the literature that aims to summarize these noise sources for future PPG device development for use in health monitoring.

Recurrence Plot and Machine Learning for Signal Quality Assessment of Photoplethysmogram in Mobile Environment

The purpose of this study was to develop a machine learning model that could accurately evaluate the quality of a photoplethysmogram based on the shape of the photoplethysmogram and the phase relevance in a pulsatile waveform without requiring complicated pre-processing. Photoplethysmograms were recorded for 76 participants (5 min for each participant). All recorded photoplethysmograms were segmented for each beat to obtain a total of 49,561 pulsatile segments. These pulsatile segments were manually labeled as ‘good’ and ‘poor’ classes and converted to a two-dimensional phase space trajectory image using a recurrence plot. The classification model was implemented using a convolutional neural network with a two-layer structure. As a result, the proposed model correctly classified 48,827 segments out of 49,561 segments and misclassified 734 segments, showing a balanced accuracy of 0.975. Sensitivity, specificity, and positive predictive values of the developed model for the test dataset with a ‘poor’ class classification were 0.964, 0.987, and 0.848, respectively. The area under the curve was 0.994. The convolutional neural network model with recurrence plot as input proposed in this study can be used for signal quality assessment as a generalized model with high accuracy through data expansion. It has an advantage in that it does not require complicated pre-processing or a feature detection process.

Comparison of Wearable and Clinical Devices for Acquisition of Peripheral Nervous System Signals

A key access point to the functioning of the autonomic nervous system is the investigation of peripheral signals. Wearable devices (WDs) enable the acquisition and quantification of peripheral signals in a wide range of contexts, from personal uses to scientific research. WDs have lower costs and higher portability than medical-grade devices. However, the achievable data quality can be lower, and data are subject to artifacts due to body movements and data losses. It is therefore crucial to evaluate the reliability and validity of WDs before their use in research. In this study, we introduce a data analysis procedure for the assessment of WDs for multivariate physiological signals. The quality of cardiac and electrodermal activity signals is validated with a standard set of signal quality indicators. The pipeline is available as a collection of open source Python scripts based on the pyphysio package. We apply the indicators for the analysis of signal quality on data simultaneously recorded from a clinical-grade device and two WDs. The dataset provides signals of six different physiological measures collected from 18 subjects with WDs. This study indicates the need to validate the use of WDs in experimental settings for research and the importance of both technological and signal processing aspects to obtain reliable signals and reproducible results.

Feasibility of Long-Term Daily Life Electrocardiogram Monitoring Based on a Wearable Armband Device

A study on the feasibility of obtaining usable electrocardiogram (ECG) signals from a wearable armband during 24-hour continuous monitoring is presented. The wearable armband records 3-channel ECG and, unlike the conventional Holter monitors, it is convenient for long-term daily life monitoring because it uses no obstructive leads and it is based on dry (no gels) electrodes, which do not cause skin irritation. An optimal channel selector is presented, based on a linear classifier using features that are related to the ECG signal quality. In addition, this linear classifier is also used for artifact detection. The developed optimal channel selector and artifact detector are applied to 24-hour armband ECG recordings from 5 subjects. For reference comparison, the subjects also wore a Holter device. The armband obtained usable data during 51.07±13.54% (inter-subject mean ± standard deviation) of the non-bed recording time, and the mean heart rate was accurately (relative error with respect to the Holter less than 10%) estimated from the armband selected ECG channel from 94.39±3.41% of the usable data. During the bed recording time, the percentage of usable data was 93.54±2.92%, and mean heart rate was estimated accurately from 97.01±1.80% of those data. These results suggest that the armband device is potentially feasible for a long-term daily life heart rate monitoring based on the presented channel selector and artifact detector, especially during the bed time.

Assessing the Quality of Heart Rate Variability Estimated from Wrist and Finger PPG: A Novel Approach Based on Cross-Mapping Method

The non-invasiveness of photoplethysmographic (PPG) acquisition systems, together with their cost-effectiveness and easiness of connection with IoT technologies, is opening up to the possibility of their widespread use. For this reason, the study of the reliability of PPG and pulse rate variability (PRV) signal quality has become of great scientific, technological, and commercial interest. In this field, sensor location has been demonstrated to play a crucial role. The goal of this study was to investigate PPG and PRV signal quality acquired from two body locations: finger and wrist. We simultaneously acquired the PPG and electrocardiographic (ECG) signals from sixteen healthy subjects (aged 28.5 ± 3.5, seven females) who followed an experimental protocol of affective stimulation through visual stimuli. Statistical tests demonstrated that PPG signals acquired from the wrist and the finger presented different signal quality indexes (kurtosis and Shannon entropy), with higher values for the wrist-PPG. Then we propose to apply the cross-mapping (CM) approach as a new method to quantify the PRV signal quality. We found that the performance achieved using the two sites was significantly different in all the experimental sessions (p < 0.01), and the PRV dynamics acquired from the finger were the most similar to heart rate variability (HRV) dynamics.

Detecting Atrial Fibrillation and Atrial Flutter in Daily Life Using Photoplethysmography Data

OBJECTIVE

Photoplethysmography (PPG) enables unobtrusive heart rate monitoring, which can be used in wrist-worn applications. Its potential for detecting atrial fibrillation (AF) has been recently presented. Besides AF, another cardiac arrhythmia increasing stroke risk and requiring treatment is atrial flutter (AFL). Currently, the knowledge about AFL detection with PPG is limited. The objective of our study was to develop a model that classifies AF, AFL, and sinus rhythm with or without premature beats from PPG and acceleration data measured at the wrist in daily life.

METHODS

A dataset of 40 patients was collected by measuring PPG and accelerometer data, as well as electrocardiogram as a reference, during 24-hour monitoring. The dataset was split into 75%-25% for training and testing a Random Forest (RF) model, which combines features from PPG, inter-pulse intervals (IPI), and accelerometer data, to classify AF, AFL, and other rhythms. The performance was compared to an AF detection algorithm combining traditional IPI features for determining the robustness of the accuracy in presence of AFL.

RESULTS

The RF model classified AF/AFL/other with sensitivity and specificity of 97.6/84.5/98.1% and 98.2/99.7/92.8%, respectively. The results with the IPI-based AF classifier showed that the majority of false detections were caused by AFL.

CONCLUSION

The PPG signal contains information to classify AFL in the presence of AF, sinus rhythm, or sinus rhythm with premature contractions.

SIGNIFICANCE

PPG could indicate presence of AFL, not only AF.

Atrial Fibrillation Detection from Wrist Photoplethysmography Signals Using Smartwatches

Detection of atrial fibrillation (AF) from a wrist watch photoplethysmogram (PPG) signal is important because the wrist watch form factor enables long term continuous monitoring of arrhythmia in an easy and non-invasive manner. We have developed a novel method not only to detect AF from a smart wrist watch PPG signal, but also to determine whether the recorded PPG signal is corrupted by motion artifacts or not. We detect motion and noise artifacts based on the accelerometer signal and variable frequency complex demodulation based time-frequency analysis of the PPG signal. After that, we use the root mean square of successive differences and sample entropy, calculated from the beat-to-beat intervals of the PPG signal, to distinguish AF from normal rhythm. We then use a premature atrial contraction detection algorithm to have more accurate AF identification and to reduce false alarms. Two separate datasets have been used in this study to test the efficacy of the proposed method, which shows a combined sensitivity, specificity and accuracy of 98.18%, 97.43% and 97.54% across the datasets.

Signal quality measure for pulsatile physiological signals using morphological features: Applications in reliability measure for pulse oximetry

Pulse oximetry is a noninvasive and low-cost physiological monitor that measures blood oxygen levels. While the noninvasive nature of pulse oximetry is advantageous, the estimates of oxygen saturation generated by these devices are prone to motion artifacts and ambient noise, reducing the reliability of such estimations. Clinicians combat this by assessing the quality of oxygen saturation estimation by visual inspection of the photoplethysmograph (PPG), which represents changes in pulsatile blood volume and is also generated by the pulse oximeter. In this paper, we propose six morphological features that can be used to determine the quality of the PPG signal and generate a signal quality index. Unlike many similar studies, this approach uses machine learning and does not require a separate signal, such as ECG, for reference. Multiple algorithms were tested against 46 30-min PPG segments of patients with cardiovascular and respiratory conditions, including atrial fibrillation, hypoxia, acute heart failure, pneumonia, ARDS, and pulmonary embolism. These signals were independently annotated for signal quality by two clinicians, with the union of their annotations used as the ground-truth. Similar to any physiological signal recorded in a clinical setting, the utilized dataset is also unbalanced in favor of good quality segments. The experiments showed that a cost-sensitive Support Vector Machine (SVM) outperformed other tested methods and was robust to the unbalanced nature of the data. Though the proposed algorithm was tested on PPG signals, the methodology remains agnostic to the dataset used, and may be applied to any type of pulsatile physiological signal.

A novel diversity method for smartphone camera-based heart rhythm signals in the presence of motion and noise artifacts

The advent of smartphones has advanced the use of embedded sensors to acquire various physiological information. For example, smartphone camera sensors and accelerometers can provide heart rhythm signals to the subjects, while microphones can give respiratory signals. However, the acquired smartphone-based physiological signals are more vulnerable to motion and noise artifacts (MNAs) compared to using medical devices, since subjects need to hold the smartphone with proper contact to the smartphone camera and lens stably and tightly for a duration of time without any movement in the hand or finger. This results in more MNA than traditional methods, such as placing a finger inside a tightly enclosed pulse oximeter to get PPG signals, which provides stable contact between the sensor and the subject's finger. Moreover, a smartphone lens does not block ambient light in an effective way, while pulse oximeters are designed to block the ambient light effectively. In this paper, we propose a novel diversity method for smartphone signals that reduces the effect of MNAs during heart rhythm signal detection by 1) acquiring two heterogeneous signals from a color intensity signal and a fingertip movement signal, and 2) selecting the less MNA-corrupted signal of the two signals. The proposed method has advantages in that 1) diversity gain can be obtained from the two heterogeneous signals when one signal is clean while the other signal is corrupted, and 2) acquisition of the two heterogeneous signals does not double the acquisition procedure but maintains a single acquisition procedure, since two heterogeneous signals can be obtained from a single smartphone camera recording. In our diversity method, we propose to choose the better signal based on the signal quality indices (SQIs), i.e., standard deviation of instantaneous heart rate (STD-HR), root mean square of the successive differences of peak-to-peak time intervals (RMSSD-T), and standard deviation of peak values (STD-PV). As a performance metric evaluating the proposed diversity method, the ratio of usable period is considered. Experimental results show that our diversity method increases the usable period 19.53% and 6.25% compared to the color intensity or the fingertip movement signals only, respectively.

Postoperative Pain Assessment Model Based on Pulse Contour Characteristics Analysis

This study aims to develop a new postoperative pain assessment model based on pulse contour analysis and to evaluate its effectiveness in postoperative pain assessment. We derived candidate features from photoplethysmography (PPG) and developed an assessment model based on multiple logistic regressions with a combination of features. This study also includes investigations into the optimal unit of analysis and number of features. For model development, PPGs obtained from 78 surgical patients with a six-min duration in pre- and post-operation conditions, including a training set of 56 pairs and a test set of 22 pairs, were used. We tested models with 5, 10, 20, 30, 40, 50, 60, 70, and 80 beats as an analysis unit, and with 1 to 8 of features for optimization, then determined 20 beats and three features to be the simplest optimal unit of analysis and number of features, respectively. The selected features were RMSSD-ACV_onset/ACA_bl, AV-A_sys/A_total, and SD-RS, where RMSSD-ACV_onset/ACA_bl is the root mean square of the successive difference of the ratio of pulse onset amplitude to the pulse onset-to-peak amplitude, AV-A_sys/A_total is the average value of a normalized systolic area of a pulse with a total pulse area, and SD-RS is the standard deviation of a rising slope of a pulse. The accuracy (AC) and the area under the curve (AUC) of the proposed model were 0.793 and 0.872 in the development set (N = 56), respectively, which were superior to those of SPI (AC: 0.643, AUC: 0.716) and ANI (AC: 0.633 AUC: 0.671). In the test set (N = 22), the AC and AUC of the proposed model were 0.712 and 0.808, respectively, which were superior to those of SPI (AC: 0.640, AUC: 0.709) and ANI (AC: 0.640, AUC: 0.680).

A Novel Personalized Motion and Noise Artifact (MNA) Detection Method for Smartphone Photoplethysmograph (PPG) Signals

Photoplethysmography (PPG) is a technique to detect blood volume changes in an optical way. Representative PPG applications are the measurements of oxygen saturation, heart rate, and respiratory rate. However, PPG signals are sensitive to motion and noise artifacts (MNAs) especially when they are obtained from smartphone cameras. Moreover, PPG signals are different among users and each individual's PPG signal has a unique characteristic. Hence, an effective MNA detection and reduction method for smartphone PPG signals, which adapts itself to each user in a personalized way, is highly demanded. Here, a concept of the probabilistic neural network (PNN) is introduced to be used with the proposed extracted parameters. The signal amplitude, standard deviation of peak to peak time intervals and amplitudes, along with the mean of moving standard deviation, signal slope changes, and the optimal autoregressive (AR) model order are proposed for effective MNA detection. Accordingly, the performance of the proposed personalized algorithm is compared with conventional MNA detection algorithms. As performance metrics, we considered accuracy, sensitivity, and specificity. The results show that the overall performance of the personalized MNA detection is enhanced compared to the generalized algorithm. The average values of the accuracy, sensitivity and specificity of the personalized one are 98.07%, 92.6%, and 99.78%, respectively, while these are 89.92%, 84.21%, and 93.63% for the general one.

Quantifying Movement in Preterm Infants Using Photoplethysmography

Long-term recordings of movement in preterm infants might reveal important clinical information. However, measurement of movement is limited because of time-consuming and subjective analysis of video or reluctance to attach additional sensors to the infant. We evaluated whether photoplethysmogram (PPG), routinely used for oximetry in preterm infants in the neonatal intensive care unit (NICU), can provide reliable long-term measurements of movement. In 18 infants [mean post-conceptional age (PCA) 31.10 weeks, range 29-34.29 weeks], we designed and tested a wavelet-based algorithm that detects movement signals from the PPG. The algorithm's performance was optimized relative to subjective assessments of movement using video and accelerometers attached to two limbs and force sensors embedded within the mattress (five infants, three raters). We then applied the optimized algorithm to infants receiving routine care in the NICU without additional sensors. The algorithm revealed a decline in brief movements (< 5 s) with increasing PCA (13 infants, r = - 0.87, p < 0.001, PCA range 27.3-33.9 weeks). Our findings suggest that quantitative relationships between motor activity and clinical outcomes in preterm infants can be studied using routine photoplethysmography.

Finite State Machine Framework for Instantaneous Heart Rate Validation Using Wearable Photoplethysmography During Intensive Exercise

Accurate estimation of heart rate (HR) using reflectance-type photoplethysmographic (PPG) signals during intensive physical exercise is challenging because of very low signal-to-noise ratio and unpredictable motion artifacts (MA), which are frequently uncorrelated with reference signals, such as accelerometer signals. In this paper, we propose a finite state machine framework based novel algorithm for HR estimation and validation, which exploits the crest factor from the periodogram obtained after MA removal, and the estimated HR changes in consecutive windows as the estimation accuracy indicators. Our proposed algorithm automatically provides only accurate HR estimation results in real time by ignoring the estimation results when true HRs are not reflected in PPG signals or when the MAs uncorrelated with accelerometer signals are dominant. The performance of the HR estimation is rigorously compared with existing algorithms on the publicly available database of 23 PPG recordings measured during intensive physical exercise. Our algorithm exhibits an average absolute error of 0.99 beats per minute and an average relative error of 0.88%. The algorithm is simple; the computational time is [Formula: see text] for 8 s window. Also, the algorithm framework can be combined with existing methods to improve estimation accuracy.

Motion Artifact Quantification and Sensor Fusion for Unobtrusive Health Monitoring

Sensors integrated into objects of everyday life potentially allow unobtrusive health monitoring at home. However, since the coupling of sensors and subject is not as well-defined as compared to a clinical setting, the signal quality is much more variable and can be disturbed significantly by motion artifacts. One way of tackling this challenge is the combined evaluation of multiple channels via sensor fusion. For robust and accurate sensor fusion, analyzing the influence of motion on different modalities is crucial. In this work, a multimodal sensor setup integrated into an armchair is presented that combines capacitively coupled electrocardiography, reflective photoplethysmography, two high-frequency impedance sensors and two types of ballistocardiography sensors. To quantify motion artifacts, a motion protocol performed by healthy volunteers is recorded with a motion capture system, and reference sensors perform cardiorespiratory monitoring. The shape-based signal-to-noise ratio SNRS is introduced and used to quantify the effect on motion on different sensing modalities. Based on this analysis, an optimal combination of sensors and fusion methodology is developed and evaluated. Using the proposed approach, beat-to-beat heart-rate is estimated with a coverage of 99.5% and a mean absolute error of 7.9 ms on 425 min of data from seven volunteers in a proof-of-concept measurement scenario.

Prediction of Extubation readiness in extremely preterm infants by the automated analysis of cardiorespiratory behavior: study protocol

Background

Extremely preterm infants (≤ 28 weeks gestation) commonly require endotracheal intubation and mechanical ventilation (MV) to maintain adequate oxygenation and gas exchange. Given that MV is independently associated with important adverse outcomes, efforts should be made to limit its duration. However, current methods for determining extubation readiness are inaccurate and a significant number of infants fail extubation and require reintubation, an intervention that may be associated with increased morbidities. A variety of objective measures have been proposed to better define the optimal time for extubation, but none have proven clinically useful. In a pilot study, investigators from this group have shown promising results from sophisticated, automated analyses of cardiorespiratory signals as a predictor of extubation readiness. The aim of this study is to develop an automated predictor of extubation readiness using a combination of clinical tools along with novel and automated measures of cardiorespiratory behavior, to assist clinicians in determining when extremely preterm infants are ready for extubation.

Methods

In this prospective, multicenter observational study, cardiorespiratory signals will be recorded from 250 eligible extremely preterm infants with birth weights ≤1250 g immediately prior to their first planned extubation. Automated signal analysis algorithms will compute a variety of metrics for each infant, and machine learning methods will then be used to find the optimal combination of these metrics together with clinical variables that provide the best overall prediction of extubation readiness. Using these results, investigators will develop an Automated system for Prediction of EXtubation (APEX) readiness that will integrate the software for data acquisition, signal analysis, and outcome prediction into a single application suitable for use by medical personnel in the neonatal intensive care unit. The performance of APEX will later be prospectively validated in 50 additional infants.

Discussion

The results of this research will provide the quantitative evidence needed to assist clinicians in determining when to extubate a preterm infant with the highest probability of success, and could produce significant improvements in extubation outcomes in this population.

Trial registration

Clinicaltrials.gov identifier: NCT01909947. Registered on July 17 2013.

Trial sponsor: Canadian Institutes of Health Research (CIHR).

Electronic supplementary material

The online version of this article (doi:10.1186/s12887-017-0911-z) contains supplementary material, which is available to authorized users.

A Robust Motion Artifact Detection Algorithm for Accurate Detection of Heart Rates From Photoplethysmographic Signals Using Time-Frequency Spectral Features

Motion and noise artifacts (MNAs) impose limits on the usability of the photoplethysmogram (PPG), particularly in the context of ambulatory monitoring. MNAs can distort PPG, causing erroneous estimation of physiological parameters such as heart rate (HR) and arterial oxygen saturation (SpO2). In this study, we present a novel approach, "TifMA," based on using the time-frequency spectrum of PPG to first detect the MNA-corrupted data and next discard the nonusable part of the corrupted data. The term "nonusable" refers to segments of PPG data from which the HR signal cannot be recovered accurately. Two sequential classification procedures were included in the TifMA algorithm. The first classifier distinguishes between MNA-corrupted and MNA-free PPG data. Once a segment of data is deemed MNA-corrupted, the next classifier determines whether the HR can be recovered from the corrupted segment or not. A support vector machine (SVM) classifier was used to build a decision boundary for the first classification task using data segments from a training dataset. Features from time-frequency spectra of PPG were extracted to build the detection model. Five datasets were considered for evaluating TifMA performance: (1) and (2) were laboratory-controlled PPG recordings from forehead and finger pulse oximeter sensors with subjects making random movements, (3) and (4) were actual patient PPG recordings from UMass Memorial Medical Center with random free movements and (5) was a laboratory-controlled PPG recording dataset measured at the forehead while the subjects ran on a treadmill. The first dataset was used to analyze the noise sensitivity of the algorithm. Datasets 2-4 were used to evaluate the MNA detection phase of the algorithm. The results from the first phase of the algorithm (MNA detection) were compared to results from three existing MNA detection algorithms: the Hjorth, kurtosis-Shannon entropy, and time-domain variability-SVM approaches. This last is an approach recently developed in our laboratory. The proposed TifMA algorithm consistently provided higher detection rates than the other three methods, with accuracies greater than 95% for all data. Moreover, our algorithm was able to pinpoint the start and end times of the MNA with an error of less than 1 s in duration, whereas the next-best algorithm had a detection error of more than 2.2 s. The final, most challenging, dataset was collected to verify the performance of the algorithm in discriminating between corrupted data that were usable for accurate HR estimations and data that were nonusable. It was found that on average 48% of the data segments were found to have MNA, and of these, 38% could be used to provide reliable HR estimation.

Optimal Signal Quality Index for Photoplethysmogram Signals

A photoplethysmogram (PPG) is a noninvasive circulatory signal related to the pulsatile volume of blood in tissue and is typically collected by pulse oximeters. PPG signals collected via mobile devices are prone to artifacts that negatively impact measurement accuracy, which can lead to a significant number of misleading diagnoses. Given the rapidly increased use of mobile devices to collect PPG signals, developing an optimal signal quality index (SQI) is essential to classify the signal quality from these devices. Eight SQIs were developed and tested based on: perfusion, kurtosis, skewness, relative power, non-stationarity, zero crossing, entropy, and the matching of systolic wave detectors. Two independent annotators annotated all PPG data (106 recordings, 60 s each) and a third expert conducted the adjudication of differences. The independent annotators labeled each PPG signal with one of the following labels: excellent, acceptable or unfit for diagnosis. All indices were compared using Mahalanobis distance, linear discriminant analysis, quadratic discriminant analysis, and support vector machine with leave-one-out cross-validation. The skewness index outperformed the other seven indices in differentiating between excellent PPG and acceptable, acceptable combined with unfit, and unfit recordings, with overall F1 scores of 86.0%, 87.2%, and 79.1%, respectively.

Characterization of the relative contributions from systemic physiological noise to whole-brain resting-state functional near-infrared spectroscopy data using single-channel independent component analysis

Functional near-infrared spectroscopy (fNIRS) is a noninvasive neuroimaging technique used to measure changes in oxygenated hemoglobin (oxy-Hb) and deoxygenated hemoglobin (deoxy-Hb) in the brain. In this study, we present a decomposition approach based on single-channel independent component analysis (scICA) to investigate the contribution of physiological noise to fNIRS signals during rest. Single-channel ICA is an underdetermined decomposition method, which separates a single time series into components containing nonredundant spectral information. Using scICA, fNIRS signals from a total of 17 subjects were decomposed into the constituent physiological components. The percentage contribution of the classes of physiology to the fNIRS signals including low-frequency (LF) fluctuations, respiration, and cardiac oscillations was estimated using spectral domain classification methods. Our results show that LF oscillations accounted for 40% to 55% of total power of both the oxy-Hb and deoxy-Hb signals. Respiration and its harmonics accounted for 10% to 30% of the power, and cardiac pulsations and cardio-respiratory components accounted for 10% to 30%. We describe this scICA method for decomposing fNIRS signals, which unlike other approaches to spatial covariance reduction is applicable to both single- or multiple-channel fNIRS signals and discuss how this approach allows functionally distinct sources of noise with disjoint spectral support to be separated from obscuring systemic physiology.

An Algorithm for Real-Time Pulse Waveform Segmentation and Artifact Detection in Photoplethysmograms

Photoplethysmography has been used in a wide range of medical devices for measuring oxygen saturation, cardiac output, assessing autonomic function, and detecting peripheral vascular disease. Artifacts can render the photoplethysmogram (PPG) useless. Thus, algorithms capable of identifying artifacts are critically important. However, the published PPG algorithms are limited in algorithm and study design. Therefore, the authors developed a novel embedded algorithm for real-time pulse waveform (PWF) segmentation and artifact detection based on a contour analysis in the time domain. This paper provides an overview about PWF and artifact classifications, presents the developed PWF analysis, and demonstrates the implementation on a 32-bit ARM core microcontroller. The PWF analysis was validated with data records from 63 subjects acquired in a sleep laboratory, ergometry laboratory, and intensive care unit in equal parts. The output of the algorithm was compared with harmonized experts' annotations of the PPG with a total duration of 31.5 h. The algorithm achieved a beat-to-beat comparison sensitivity of 99.6%, specificity of 90.5%, precision of 98.5%, and accuracy of 98.3%. The interrater agreement expressed as Cohen's kappa coefficient was 0.927 and as F-measure was 0.990. In conclusion, the PWF analysis seems to be a suitable method for PPG signal quality determination, real-time annotation, data compression, and calculation of additional pulse wave metrics such as amplitude, duration, and rise time.

A new movement artifact detector for photoplethysmographic signals

Oximeters are commonly used in abbreviated cardiorespiratory studies (ACS) to monitor blood oxygen saturation and heart rate using the photoplethysmography (PPG) signal. These data are prone to movement artifacts, especially in infants who move or need to be handled often. Therefore segments of PPG data contaminated by movement artifact must be detected as a first stage of analysis. In ACS this identification is generally done manually, by having an expert visually assess the quality of the signal. This is subjective and very time consuming, especially for long data records. For this reason we present a novel detector of PPG movement artifacts that uses moving average filters to remove trends, reduce the effect of white noise, and notch filter pulse-related information. The normalized root mean square of the filtered signal is then used as a detection statistic. We demonstrate its detection properties using a data set from infants recovering from anesthesia, and show that it performs better than other automated methods based on entropy or higher-order statistics. Furthermore, the new method is more robust than the other methods in the presence of large noise.