1
|
Kanishka AM, MacGregor C, Neaves LE, Evans MJ, Robinson NM, Dexter N, Dickman CR, Lindenmayer DB. Quantifying the Dietary Overlap of Two Co-Occurring Mammal Species Using DNA Metabarcoding to Assess Potential Competition. Ecol Evol 2025; 15:e71274. [PMID: 40225886 PMCID: PMC11992362 DOI: 10.1002/ece3.71274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2024] [Revised: 03/11/2025] [Accepted: 03/31/2025] [Indexed: 04/15/2025] Open
Abstract
Interspecific competition is often assumed in ecosystems where co-occurring species have similar resource requirements. The potential for competition can be investigated by measuring the dietary overlap of putative competitor species. The degree of potential competition between generalist species has often received less research attention than competition between specialist species. We examined dietary overlap between two naturally co-occurring dietary generalist species: the common brushtail possum Trichosurus vulpecula and the bush rat Rattus fuscipes. To gauge the potential for competition, we conducted a diet analysis using DNA extracted from faecal samples to identify the range of food items consumed by both species within a shared ecosystem and quantify their dietary overlap. We used DNA metabarcoding on faecal samples to extract plant, fungal, and invertebrate DNA, identifying diet items and quantifying dietary range and overlap. The species' diets were similar, with a Pianka's overlap index score of 0.84 indicating high dietary similarity. Bush rats had a large dietary range, consisting of many plant and fungal species and some invertebrates, with almost no within-species variation. Possums had a more restricted dietary range, consisting primarily of plants. We suggest that the larger dietary range of the bush rat helps buffer it from the impacts of competition from possums by providing access to more food types. We conclude that, despite the high ostensible overlap in the foods consumed by dietary generalist species, fine-scale partitioning of food resources may be a key mechanism to alleviate competition and permit co-existence.
Collapse
Affiliation(s)
- Aurelie M. Kanishka
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
| | - Christopher MacGregor
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
| | - Linda E. Neaves
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
| | - Maldwyn John Evans
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
| | - Natasha M. Robinson
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
- Conservation and Restoration Science Branch, Science, Economics and Insights DivisionNSW Department of Climate Change, Energy, the Environment and WaterParramattaNew South WalesAustralia
| | - Nick Dexter
- Booderee National ParkJervis BayAustralian Capital TerritoryAustralia
| | - Chris R. Dickman
- School of Life and Environmental SciencesThe University of SydneySydneyNew South WalesAustralia
| | - David B. Lindenmayer
- Fenner School of Environment and SocietyThe Australian National UniversityCanberraAustralian Capital TerritoryAustralia
| |
Collapse
|
2
|
Moseby KE, Read JL, Tuft K, Van der Weyde LK. Influence of interactive effects on long-term population trajectories in multispecies reintroductions. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2024; 38:e14209. [PMID: 37877174 DOI: 10.1111/cobi.14209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 10/10/2023] [Accepted: 10/11/2023] [Indexed: 10/26/2023]
Abstract
Reintroduced populations are typically considered to progress through establishment, growth, and regulatory phases. However, most reintroduction programs do not monitor intensively enough to test this conceptual model. We studied population indices derived from track activity of 4 threatened species (greater bilby [Macrotis lagotis], burrowing bettong [Bettongia lesueur], greater stick-nest rat [Leporillus conditor], and Shark Bay bandicoot [Perameles bougainville]) over 23 years after multiple reintroductions of each species in arid Australia. We compared population trajectories among species and investigated the effect of time and environmental variables. All species bred immediately after release, and the growth phase lasted 3-16 years, varying markedly among but not within species. The end of the growth phase was characterized by an obvious peak in population density followed by either a catastrophic decline and sustained low density (bettongs), a slow decline to extirpation after 20 years (stick-nest rat), or a slight decline followed by irregular fluctuations (bilby and bandicoot). Minor fluctuations were related to environmental variables, including 12-month cumulative rainfall and lagged summer maximum temperatures. Three of the 4 species did not reach a regulation phase, even after 23 years, possibly due to interspecific competition and trophic cascades triggered by predator removal and multispecies reintroductions. Bilbies and bandicoots exhibited a second growth phase 18 years after reintroduction, likely caused by high rainfall and increased resources following the population crash of overabundant bettongs. Our results suggest that assemblages within multispecies reintroductions demonstrate high variability in population trajectories due to interactive effects. Intensive monitoring to assess population viability may require decades, particularly where multiple species are reintroduced, release sites are confined, and the climate is unpredictable. Intensive monitoring also allows for adaptive management to prevent precipitous population declines. Practitioners should not assume reintroduced species pass through predictable postrelease population phases or that viability is assured after a certain period.
Collapse
Affiliation(s)
- Katherine E Moseby
- The University of New South Wales, Sydney, New South Wales, Australia
- Arid Recovery, Roxby Downs, South Australia, Australia
| | - John L Read
- Arid Recovery, Roxby Downs, South Australia, Australia
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
| | | | | |
Collapse
|
3
|
Nistelberger HM, Roycroft E, Macdonald AJ, McArthur S, White LC, Grady PGS, Pierson J, Sims C, Cowen S, Moseby K, Tuft K, Moritz C, Eldridge MDB, Byrne M, Ottewell K. Genetic mixing in conservation translocations increases diversity of a keystone threatened species, Bettongia lesueur. Mol Ecol 2023. [PMID: 37715549 DOI: 10.1111/mec.17119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Revised: 07/11/2023] [Accepted: 08/17/2023] [Indexed: 09/17/2023]
Abstract
Translocation programmes are increasingly being informed by genetic data to monitor and enhance conservation outcomes for both natural and established populations. These data provide a window into contemporary patterns of genetic diversity, structure and relatedness that can guide managers in how to best source animals for their translocation programmes. The inclusion of historical samples, where possible, strengthens monitoring by allowing assessment of changes in genetic diversity over time and by providing a benchmark for future improvements in diversity via management practices. Here, we used reduced representation sequencing (ddRADseq) data to report on the current genetic health of three remnant and seven translocated boodie (Bettongia lesueur) populations, now extinct on the Australian mainland. In addition, we used exon capture data from seven historical mainland specimens and a subset of contemporary samples to compare pre-decline and current diversity. Both data sets showed the significant impact of population founder source (whether multiple or single) on the genetic diversity of translocated populations. Populations founded by animals from multiple sources showed significantly higher genetic diversity than the natural remnant and single-source translocation populations, and we show that by mixing the most divergent populations, exon capture heterozygosity was restored to levels close to that observed in pre-decline mainland samples. Relatedness estimates were surprisingly low across all contemporary populations and there was limited evidence of inbreeding. Our results show that a strategy of genetic mixing has led to successful conservation outcomes for the species in terms of increasing genetic diversity and provides strong rationale for mixing as a management strategy.
Collapse
Affiliation(s)
- Heidi M Nistelberger
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| | - Emily Roycroft
- Division of Ecology & Evolution, Research School of Biology, ANU College of Science, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Anna J Macdonald
- Division of Ecology & Evolution, Research School of Biology, ANU College of Science, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Shelley McArthur
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| | - Lauren C White
- Department of Environment, Land, Water and Planning, Arthur Rylah Institute for Environmental Research, Heidelberg, Victoria, Australia
| | - Patrick G S Grady
- Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA
| | - Jennifer Pierson
- Australian Wildlife Conservancy, Subiaco, Western Australia, Australia
| | - Colleen Sims
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| | - Saul Cowen
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| | - Katherine Moseby
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales, Australia
| | | | - Craig Moritz
- Division of Ecology & Evolution, Research School of Biology, ANU College of Science, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Mark D B Eldridge
- Terrestrial Vertebrates, Australian Museum Research Institute, Sydney, New South Wales, Australia
| | - Margaret Byrne
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| | - Kym Ottewell
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, Western Australia, Australia
| |
Collapse
|
4
|
Read JL, Wilson GR, Coulson G, Cooney R, Paton DC, Moseby KE, Snape MA, Edwards MJ. Improving Kangaroo Management: A Joint Statement. ECOLOGICAL MANAGEMENT & RESTORATION 2021. [DOI: 10.1111/emr.12467] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
|
5
|
Lohr CA, Nilsson K, Sims C, Dunlop J, Lohr MT. Habitat selection by vulnerable golden bandicoots in the arid zone. Ecol Evol 2021; 11:10644-10658. [PMID: 34367603 PMCID: PMC8328459 DOI: 10.1002/ece3.7875] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Revised: 06/10/2021] [Accepted: 06/17/2021] [Indexed: 11/13/2022] Open
Abstract
In 2010, vulnerable golden bandicoots (Isoodon auratus) were translocated from Barrow Island, Western Australia, to a mainland predator-free enclosure on the Matuwa Indigenous Protected Area. Golden bandicoots were once widespread throughout a variety of arid and semiarid habitats of central and northern Australia. Like many small-to-medium-sized marsupials, the species has severely declined since colonization and has been reduced to only four remnant natural populations. Between 2010 and 2020, the reintroduced population of golden bandicoots on Matuwa was monitored via capture-mark-recapture data collection, which was used in spatially explicit capture-recapture analysis to monitor their abundance over time. In 2014, we used VHF transmitters to examine the home range and habitat selection of 20 golden bandicoots in the enclosure over a six-week period. We used compositional analysis to compare the use of four habitat types. Golden bandicoot abundance in the enclosure slowly increased between 2010 and 2014 and has since plateaued at approximately one quarter of the density observed in the founding population on Barrow Island. The population may have plateaued because some bandicoots escape through the fence. Golden bandicoots used habitats dominated by scattered shrubland with spinifex grass more than expected given the habitat's availability. Nocturnal foraging range was influenced by sex and trapping location, whereas diurnal refuge habitat, which was typically under a spinifex hummock with minimal overstory vegetation, was consistent across sex and trapping location. Our work suggests that diurnal refuge habitat may be an important factor for the success of proposed translocations of golden bandicoots.
Collapse
Affiliation(s)
- Cheryl A. Lohr
- Department of Biodiversity Conservation and AttractionsBiodiversity Conservation ScienceKensingtonWestern AustraliaAustralia
| | - Kristen Nilsson
- Department of Biodiversity Conservation and AttractionsBiodiversity Conservation ScienceKensingtonWestern AustraliaAustralia
| | - Colleen Sims
- Department of Biodiversity Conservation and AttractionsBiodiversity Conservation ScienceKensingtonWestern AustraliaAustralia
| | - Judy Dunlop
- Department of Biodiversity Conservation and AttractionsBiodiversity Conservation ScienceKensingtonWestern AustraliaAustralia
| | - Michael T. Lohr
- Phoenix Environmental SciencesOsborne ParkWestern AustraliaAustralia
- School of Science, Edith Cowan University, 100 Joondalup DriveJoondalupWA 6027Australia
| |
Collapse
|