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Jobaer MA, Ashrafi S, Ahsan M, Hasan CM, Rashid MA, Islam SN, Masud MM. Phytochemical and Biological Investigation of an Indigenous Plant of Bangladesh, Gynura procumbens (Lour.) Merr.: Drug Discovery from Nature. Molecules 2023; 28:molecules28104186. [PMID: 37241926 DOI: 10.3390/molecules28104186] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 05/11/2023] [Accepted: 05/13/2023] [Indexed: 05/28/2023] Open
Abstract
Gynura procumbens (Lour.) Merr. (Family: Asteraceae) is a tropical Asian medicinal plant found in Thailand, China, Malaysia, Indonesia, and Vietnam. It has long been utilized to treat a variety of health concerns in numerous countries around the world, such as renal discomfort, constipation, diabetes mellitus, rheumatism, and hypertension. The chemical investigation resulted in the isolation and characterization of six compounds from the methanol (MeOH) extract of the leaves of Gynura procumbens, which were identified as phytol (1), lupeol (2), stigmasterol (3), friedelanol acetate (4), β-amyrin (5), and a mixture of stigmasterol and β-sitosterol (6). In-depth investigations of the high-resolution 1H NMR and 13C NMR spectroscopic data from the isolated compounds, along with comparisons to previously published data, were used to clarify their structures. Among these, the occurrence of Compounds 1 and 4 in this plant are reported for the first time. The crude methanolic extract (CME) and its different partitionates, i.e., petroleum ether (PESF), chloroform (CSF), ethyl acetate (EASF), and aqueous (AQSF) soluble fractions, were subjected to antioxidant, cytotoxic, thrombolytic, and anti-diabetic activities. In a DPPH free radical scavenging assay, EASF showed the maximum activity, with an IC50 value of 10.78 µg/mL. On the other hand, CSF displayed the highest cytotoxic effect with an LC50 value of 1.94 µg/mL compared to 0.464 µg/mL for vincristine sulphate. In a thrombolytic assay, the crude methanolic extract exhibited the highest activity (63.77%) compared to standard streptokinase (70.78%). During the assay for anti-diabetic activity, the PESF showed 70.37% of glucose-lowering activity, where standard glibenclamide showed 63.24% of glucose-reducing activity.
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Affiliation(s)
- Md Abu Jobaer
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
| | - Sania Ashrafi
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
| | - Monira Ahsan
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
| | - Choudhury Mahmood Hasan
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
| | - Mohammad Abdur Rashid
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
| | - Sheikh Nazrul Islam
- Institute of Nutrition and Food Science, University of Dhaka, Dhaka 1000, Bangladesh
| | - Mohammad Mehedi Masud
- Phytochemical Research Laboratory, Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Dhaka, Dhaka 1000, Bangladesh
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Tabassum F, Hasan CM, Masud MM, Jamshidi S, Rahman KM, Ahsan M. Indole alkaloids from the leaves of Ravenia spectabilis engl. with activity against pancreatic cancer cell line. Phytochemistry 2021; 186:112744. [PMID: 33780702 DOI: 10.1016/j.phytochem.2021.112744] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 03/13/2021] [Accepted: 03/15/2021] [Indexed: 06/12/2023]
Abstract
Two previously undescribed indole alkaloids, 3-prenyl-5(3-keto-but-1-enyl) indole and 3-prenyl-indole-5-carbaldehyde, the structurally-related 3,5-diprenyl indole and four known alkaloids were isolated from the leaves of Ravenia spectabilis Engl. Structures were elucidated based on nuclear magnetic resonance (1D and 2D NMR) spectroscopic and mass spectrometric analysis. The previously undescribed compounds isolated were subsequently screened against the HeLa (human cervical cancer), MIA PaCa-2 (human pancreatic adenocarcinoma) and A549 (lung cancer) cell lines. Among the isolated compounds, 3,5-diprenyl indole was the most cytotoxic across all three cell lines (MIA PaCa-2 IC50 = 9.5 ± 2.2 μM). Molecular modelling studies suggested DNA intercalation as the mode of action of these compounds.
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Affiliation(s)
- Fatema Tabassum
- Department of Pharmaceutical Chemistry, University of Dhaka, Dhaka, 1000, Bangladesh; Department of Pharmacy, Northern University Bangladesh, Dhaka, 1205, Bangladesh
| | | | - Mohammad Mehedi Masud
- Department of Pharmaceutical Chemistry, University of Dhaka, Dhaka, 1000, Bangladesh
| | - Shirin Jamshidi
- Institute of Pharmaceutical Science, King's College London, 150 Stamford Street, London, SE1 9NH, UK
| | - Khondaker Miraz Rahman
- Institute of Pharmaceutical Science, King's College London, 150 Stamford Street, London, SE1 9NH, UK.
| | - Monira Ahsan
- Department of Pharmaceutical Chemistry, University of Dhaka, Dhaka, 1000, Bangladesh
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Masud MM, Baquy MAA, Akhter S, Sen R, Barman A, Khatun MR. Liming effects of poultry litter derived biochar on soil acidity amelioration and maize growth. Ecotoxicol Environ Saf 2020; 202:110865. [PMID: 32570103 DOI: 10.1016/j.ecoenv.2020.110865] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Revised: 06/04/2020] [Accepted: 06/05/2020] [Indexed: 06/11/2023]
Abstract
Crop production in acid soils is facing enormous challenges due to low soil quality associated with an increase in the acidification rate and aluminum toxicity. Despite comprehensive prior work with biochar application on nutrient availability and crop productivity in acid soils, little information is available about the recommendation or standardization of biochar application rates that are more suitable for soil fertility improvement under different soil environments (physico-chemical properties) for maximizing the benefits of biochar applications and minimizing the potential environmental risk. Thus, the objective of this study was to investigate the effectiveness of poultry litter (PL) and poultry litter biochar (PLB) in ameliorating the fertility of acid soils through incubation and pot experiments. The soil was amended with different materials as follows; lime (1 g kg-1), PL (5, 10 and 15 g kg-1) and PLB (5, 10 and 15 g kg-1) along with control (non-amended). A pot experiment was also conducted using similar treatments to observe the responses of maize crop to the different amendments. The results indicated an increase in the pH and a decrease in exchangeable acidity in lime, PL and PLB amended soils. Lower soil pH, base cations and soil available phosphorus (P), and higher exchangeable acidity were found in control than the amended soils. Compared to PL and lime, PLB achieved greater increase rate in soil pH and reduction rate in soil exchangeable acidity with increased soil exchangeable base cations. An increase in soil available calcium (Ca) was observed in the lime treatment, while in PL and PLB treatments, there was an increase in soil available Ca, magnesium (Mg), potassium (K) and P. Application of the amendments increased availability of nitrogen (N), P, K, Ca and Mg relative to the control for maize in the pot experiment. When PL and PLB amendments were compared, it was found that the PLB was the best choice for the amelioration of acid soils as well as nutrient uptake by maize plants. It is suggested that application of PLB at the rate of 15 g kg-1 is suitable for maize growth in acid soils.
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Affiliation(s)
- M M Masud
- Soil Science Division, Bangladesh Agricultural Research Institute, Gazipur, 1701, Bangladesh
| | - M Abdulaha-Al Baquy
- Department of Soil Science, Faculty of Agriculture, Hajee Mohammad Danesh Science and Technology University, Dinajpur, 5200, Bangladesh.
| | - S Akhter
- Soil Science Division, Bangladesh Agricultural Research Institute, Gazipur, 1701, Bangladesh
| | - R Sen
- Soil Science Division, Bangladesh Agricultural Research Institute, Gazipur, 1701, Bangladesh
| | - A Barman
- Soil Science Division, Bangladesh Agricultural Research Institute, Gazipur, 1701, Bangladesh
| | - M R Khatun
- Soil Science Division, Bangladesh Agricultural Research Institute, Gazipur, 1701, Bangladesh
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Abstract
The incorporation of the modified nucleoside into the 3´-overhang regions of short interfering
RNAs (siRNAs) has been reported to enhance their nuclease resistance and improve RNA interference
activity. In this study, DNA 2-mers containing C5-polyamine-modified pyrimidine nucleosides
were synthesized and then ligated to the 3´-end of the RNA by T4 RNA ligase. The modification of the
base moiety with tris(2-aminoethyl)amine affected the ligation efficiency, but the DNA 2-mer containing
only one modified nucleoside was ligated with sufficient efficiency. We propose a novel synthetic
route to modified siRNA bearing various modified groups in the 3´-overhang region.
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Affiliation(s)
- Tomokazu Masuda
- Department of Chemistry and Chemical Biology, Graduate School of Engineering, Gunma University, 4-2 Aramaki, Maebashi, Gunma 371-8510, Japan
| | - Shingo Kimura
- Department of Chemistry and Chemical Biology, Graduate School of Engineering, Gunma University, 4-2 Aramaki, Maebashi, Gunma 371-8510, Japan
| | - Mohammad Mehedi Masud
- Department of Chemistry and Chemical Biology, Graduate School of Engineering, Gunma University, 4-2 Aramaki, Maebashi, Gunma 371-8510, Japan
| | - Hiroaki Ozaki
- Division of Pure and Applied Science, Faculty of Science and Technology, Gunma University, 4-2 Aramaki, Maebashi, Gunma 371-8510, Japan
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Li JY, Masud MM, Li ZY, Xu RK. Amelioration of an Ultisol profile acidity using crop straws combined with alkaline slag. Environ Sci Pollut Res Int 2015; 22:9965-9975. [PMID: 25666472 DOI: 10.1007/s11356-015-4176-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2014] [Accepted: 01/25/2015] [Indexed: 06/04/2023]
Abstract
The acidity of Ultisols (pH <5) is detrimental to crop production. Technologies should be explored to promote base saturation and liming effect for amelioration of Ultisol pH. Column leaching experiments were conducted to investigate the amelioration effects of canola straw (CS) and peanut straw (PS) in single treatment and in combination whether with alkaline slag (AS) or with lime on Ultisol profile acidity. The treatment without liming materials was set as control, and the AS and lime in single treatment are set for comparison. Results indicated that all the liming materials increase soil profile pH and soil exchangeable base cations at the 0-40-cm depth, except that the lime had amelioration effect just on 0 to 15-cm profile. The amelioration effect of the liming materials on surface soil acidity was mainly dependent on the ash alkalinity in organic materials or acid neutralization capacity of inorganic materials. Specific adsorption of sulfate (SO4(2-)) or organic anions, decarboxylation of organic acids/anions, and the association of H(+) with organic anions induced a "liming effect" of crop residues and AS on subsoil acidity. Moreover, SO4(2-) and chloride (Cl(-)) in PS, CS, and AS primarily induced base cations to move downward to subsoil and exchange with exchangeable aluminum (Al(3+)) and protons (H(+)). These anions also promoted the exchangeable Al to leach out of the soil profile. The CS was more effective than PS in decreasing soil acidity in the subsoil, which mainly resulted from higher sulfur (S) and Cl content in CS compared to PS. The CS combined with AS was the better amendment choice in practical agricultural systems.
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Affiliation(s)
- Jiu-yu Li
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, P.O. Box 821, Nanjing, China
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Alam MS, Uddin MJ, Masud MM, Mamun AA. Roles of superthermal electrons and positrons on positron-acoustic solitary waves and double layers in electron-positron-ion plasmas. Chaos 2014; 24:033130. [PMID: 25273210 DOI: 10.1063/1.4895049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Positron-acoustic (PA) solitary waves (SWs) and double layers (DLs) in four-component plasmas consisting of immobile positive ions, mobile cold positrons, and superthermal (kappa distributed) hot positrons and electrons are investigated both numerically and analytically by deriving Korteweg-de Vries (K-dV), modified K-dV (mK-dV), and Gardner equations along with their DLs solutions using the reductive perturbation method. It is examined that depending on the plasma parameters, the K-dV SWs, Gardner SWs, and DLs support either compressive or rarefactive structures, whereas mK-dV SWs support only compressive structure. It is also found that the presence of superthermal (kappa distributed) hot positrons and hot electrons significantly modify the basic features of PA SWs as well as PA DLs. Besides, the critical number density ratio of hot positrons and cold positrons play an important role in the polarity of PA SWs and DLs. The implications of our results in different space as well as laboratory plasma environments are briefly discussed.
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Affiliation(s)
- M S Alam
- Department of Physics, Jahangirnagar University, Savar, Dhaka, Bangladesh
| | - M J Uddin
- Department of Physics, Jahangirnagar University, Savar, Dhaka, Bangladesh
| | - M M Masud
- Department of Physics, Bangladesh University of Engineering and Technology, Dhaka, Bangladesh
| | - A A Mamun
- Department of Physics, Jahangirnagar University, Savar, Dhaka, Bangladesh
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Tasnim I, Masud MM, Asaduzzaman M, Mamun AA. Dust-acoustic Gardner solitons and double layers in dusty plasmas with nonthermally distributed ions of two distinct temperatures. Chaos 2013; 23:013147. [PMID: 23556984 DOI: 10.1063/1.4794796] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
A rigorous theoretical investigation has been performed on dust-acoustic (DA) solitary structures in an unmagnetized dusty plasma, consisting of negatively charged mobile dust grains, Boltzmann distributed electrons, and nonthermally distributed ions of two distinct temperatures. The Korteweg-de Vries (K-dV), modified K-dV (mK-dV) and Gardner equations, and their solitary waves (SWs) and double layer (DL) (in case of Gardner equation) solutions are derived by using the reductive perturbation technique. The basic features of the DA Gardner solitons (GSs) and DLs are studied analytically as well as numerically. It has been observed that the GSs significantly differ from K-dV and mK-dV solitons, and only positive potential DLs exist in the system. It is also studied that two-temperature nonthermal ions significantly modify the nature and basic properties of the DA SWs. The present investigation can be very effective for understanding and studying the nonlinear characteristics of the DA waves in laboratory and space dusty plasmas.
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Affiliation(s)
- I Tasnim
- Department of Physics, Jahangirnagar University, Savar, Dhaka 1342, Bangladesh
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Abstract
The ethanol extract of leaves of Derris uliginosa given by oral route at dose of 250 and 500 mg/kg produced a significant inhibition on acetic acid-induced writhing in mice.
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Affiliation(s)
- F Ahmed
- Pharmacy Discipline, Khulna University, Khulna-9208, Bangladesh.
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Masud MM, Kuwahara M, Ozaki H, Sawai H. Sialyllactose-binding modified DNA aptamer bearing additional functionality by SELEX. Bioorg Med Chem 2004; 12:1111-20. [PMID: 14980623 DOI: 10.1016/j.bmc.2003.12.009] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2003] [Accepted: 12/03/2003] [Indexed: 11/26/2022]
Abstract
We produced a novel cationic-charged modified DNA aptamer for sialyllactose that is a ubiquitous component of the cell surface responsible for the infection of several viruses by using the magnetic-particle-based SELEX method. After 13 rounds of selection we selected 22 clones as sialyllactose-binding DNA aptamers composed of several modified thymidines. The DNA aptamers could form a three-way junction structure that likely forms a binding site for siallyllactose. The three-way junction structure contains several modified thymidines bearing a positively-charged amino group at the C5 position, which could enhance the binding ability for silalyllactose which has a negatively-charged carboxyl group. The dissociation constant of the aptamer that showed the strongest sialyllactose-binding ability among the clones of the aptamers was 4.9 microM.
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Abstract
We synthesized various 5'-triphosphates of C5-substituted 2'-deoxyuridine derivatives bearing methylene linker at C5-alpha position. We examined whether the C5-substituted 2'-deoxyuridine 5'-triphosphates (dUTP) can work as a substrate for the modified DNA synthesis by PCR. We found that only KOD dash DNA polymerase, a thermostable DNA polymerase from extremely thermophilic archaeum, accepted the modified substrates in place of TTP for PCR forming the corresponding modified DNAs. On the other hand, no other DNA polymerase could accept these TTP analogues.
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Affiliation(s)
- M M Masud
- Department of Applied Chemistry, Faculty of Engineering, Gunma University, Kiryu, Gunma 376-8515, Japan
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Mehedi Masud M, Ozaki-Nakamura A, Kuwahara M, Ozaki H, Sawai H. Modified DNA bearing 5(methoxycarbonylmethyl)-2'-deoxyuridine: preparation by PCR with thermophilic DNA polymerase and postsynthetic derivatization. Chembiochem 2003; 4:584-8. [PMID: 12851926 DOI: 10.1002/cbic.200200539] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
A thymidine analogue bearing a methyl ester at the C5 position was accepted as a substrate by the thermophilic family B DNA polymerases, KOD Dash, Pwo, and Vent(exo-), to form the corresponding PCR product, but not by the thermophilic family A DNA polymerases, Taq, Tth, and T7 thermosequenase. Modified DNA containing this analogue was prepared by PCR on a large scale with KOD Dash DNA polymerase and 5(methoxycarbonylmethyl)-2'-deoxyuridine 5'-triphosphate as a substrate. The methyl ester of the modified DNA was further allowed to react with tris(2-aminoethyl)amine or histamine by an ester-amide exchange reaction to form the corresponding derivatized DNA bearing a tris(2-aminoethyl)amine or histamine moiety. Hydrolysis of the methyl ester of the modified DNA gave a functionalized DNA bearing an anionic carboxyl group. The derivatized DNA could act as a template for the PCR with KOD Dash DNA polymerase and the natural 2'-deoxythymidine 5'-triphosphate or the modified thymidine analogue as a substrate. The postsynthetic derivatization of the modified DNA may expand the variety of structurally modified DNA produced by PCR.
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Tashiro M, Itoh M, Kubota K, Kumano H, Masud MM, Moser E, Arai H, Sasaki H. Relationship between trait anxiety, brain activity and natural killer cell activity in cancer patients: a preliminary PET study. Psychooncology 2001; 10:541-6. [PMID: 11747066 DOI: 10.1002/pon.548] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The purpose of this study is to examine the relationship between psychological factors, regional brain activity and natural killer cell activity (NKA). Eight patients with malignant diseases were studied by FDG-PET under a resting condition. NKA and degree of anxiety and depression were measured using Taylor's manifest anxiety scale (MAS) and Zung's self-rating depression scale (SDS). Linear correlation of NKA and psychological measures to the regional brain metabolism in cancer patients was examined using statistical parametric mapping (SPM). Positive linear correlation between NKA and regional metabolic rate ratios was identified in the visual association cortex, anterior cingulate gyrus (CG) and sensorimotor area, and negative correlation was identified in the inferolateral prefrontal cortex (ILPFC), prefrontal cortex (PFC), orbitofrontal cortex (OFC) and anterior temporal cortex. Positive linear correlation to the MAS score was identified in the visual association cortex, anterior CG, primary sensorimotor area and the posterior parietal cortex, and negative correlation was detected in the ILPFC, PFC, OFC and anterior temporal cortex. The NKA and MAS scores positively correlated with each other (p<0.001). The result might serve as supporting data for a hypothesis that psycho-immune interaction is also mediated by the cerebral cortex and limbic system.
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Affiliation(s)
- M Tashiro
- Division of Nuclear Medicine, Cyclotron and Radioisotope Centre, Tohoku University, Sendai, Japan.
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