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Nazari M, Davoodabadi A, Huang D, Luo T, Ghasemi H. Transport Phenomena in Nano/Molecular Confinements. ACS NANO 2020; 14:16348-16391. [PMID: 33253531 DOI: 10.1021/acsnano.0c07372] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The transport of fluid and ions in nano/molecular confinements is the governing physics of a myriad of embodiments in nature and technology including human physiology, plants, energy modules, water collection and treatment systems, chemical processes, materials synthesis, and medicine. At nano/molecular scales, the confinement dimension approaches the molecular size and the transport characteristics deviates significantly from that at macro/micro scales. A thorough understanding of physics of transport at these scales and associated fluid properties is undoubtedly critical for future technologies. This compressive review provides an elaborate picture on the promising future applications of nano/molecular transport, highlights experimental and simulation metrologies to probe and comprehend this transport phenomenon, discusses the physics of fluid transport, tunable flow by orders of magnitude, and gating mechanisms at these scales, and lists the advancement in the fabrication methodologies to turn these transport concepts into reality. Properties such as chain-like liquid transport, confined gas transport, surface charge-driven ion transport, physical/chemical ion gates, and ion diodes will provide avenues to devise technologies with enhanced performance inaccessible through macro/micro systems. This review aims to provide a consolidated body of knowledge to accelerate innovation and breakthrough in the above fields.
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Chernev A, Marion S, Radenovic A. Prospects of Observing Ionic Coulomb Blockade in Artificial Ion Confinements. ENTROPY (BASEL, SWITZERLAND) 2020; 22:E1430. [PMID: 33353100 PMCID: PMC7766073 DOI: 10.3390/e22121430] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 12/11/2020] [Accepted: 12/11/2020] [Indexed: 12/18/2022]
Abstract
Nanofluidics encompasses a wide range of advanced approaches to study charge and mass transport at the nanoscale. Modern technologies allow us to develop and improve artificial nanofluidic platforms that confine ions in a way similar to single-ion channels in living cells. Therefore, nanofluidic platforms show great potential to act as a test field for theoretical models. This review aims to highlight ionic Coulomb blockade (ICB)-an effect that is proposed to be the key player of ion channel selectivity, which is based upon electrostatic exclusion limiting ion transport. Thus, in this perspective, we focus on the most promising approaches that have been reported on the subject. We consider ion confinements of various dimensionalities and highlight the most recent advancements in the field. Furthermore, we concentrate on the most critical obstacles associated with these studies and suggest possible solutions to advance the field further.
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103
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Wang X, Liu M, Jing D, Mohamad A, Prezhdo O. Net Unidirectional Fluid Transport in Locally Heated Nanochannel by Thermo-osmosis. NANO LETTERS 2020; 20:8965-8971. [PMID: 33231457 DOI: 10.1021/acs.nanolett.0c04331] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Thermo-osmosis driven by temperature gradients generally requires two liquid reservoirs at different temperatures connected by porous bodies or capillaries. We demonstrate, by molecular dynamics simulation, a new phenomenon toward nanoscale thermo-osmosis. Upon heating at a certain region of a nanochannel, multiple nanoscale convective layers are formed and can be manipulated to generate a net fluid transport from one reservoir to another, even without a temperature difference between them. A net unidirectional fluid transport with different rates can be achieved by precisely controlling location of the heated region. The net fluid transport can be enhanced further by tuning liquid-wall interactions. The demonstrated phenomenon provides a strategy for enhancing fluid mixing, which is often inefficient in nanoscale flows. Our finding is promising for chip-level cooling. The heat generated by chips can be employed to produce asymmetric temperature gradients in channels through proper configuration. Coolant liquids can thus be circulated without extra pumps.
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104
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Sabbagh B, Stolovicki E, Park S, Weitz DA, Yossifon G. Tunable Nanochannels Connected in Series for Dynamic Control of Multiple Concentration-Polarization Layers and Preconcentrated Molecule Plugs. NANO LETTERS 2020; 20:8524-8533. [PMID: 33226817 DOI: 10.1021/acs.nanolett.0c02973] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Integration of ionic permselective medium (e.g., nanochannels, membranes) within microfluidic channels has been shown to enable on-chip desalination, sample purification, bioparticle sorting, and biomolecule concentration for enhanced detection sensitivity. However, the ion-permselective mediums are generally of fixed properties and cannot be dynamically tuned. Here we study a microfluidic device consisting of an array of individually addressable elastic membranes connected in series on top of a single microfluidic channel that can be deformed to locally reduce the channel cross-section into a nanochannel. Dynamic tunability of the ion-permselective medium, as well as controllability of its location and ionic permselectivity, introduces a new functionality to microfluidics-based lab-on-a-chip devices, for example, dynamic localization of preconcentrated biomolecule plugs at different sensing regions for multiplex detection. Moreover, the ability to simultaneously form a series of preconcentrated plugs at desired locations increases parallelization of the system and the trapping efficiency of target analytes.
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105
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Gao M, Tsai PC, Su YS, Peng PH, Yeh LH. Single Mesopores with High Surface Charges as Ultrahigh Performance Osmotic Power Generators. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2020; 16:e2006013. [PMID: 33155434 DOI: 10.1002/smll.202006013] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Revised: 10/14/2020] [Indexed: 06/11/2023]
Abstract
Numerous studies on osmotic power generators with nanoscale pores are conducted. However, their performance output is limited because of the finite osmotic current and conductance from such tiny pores. Here, a proof-of-concept study demonstrating that the rectified mesopore (sub-micrometer-scale pore) with high surface charges can be applied in osmotic energy conversion is reported. A single conical mesopore of ≈405 nm in tip diameter, which can reach an osmotic conductance as high as 0.284 μS (corresponding to a current of 27.5 nA and voltage of 97 mV), enables a record-high power of 667 pW under a 1000-fold salinity gradient, more than doubling all of the state-of-the-art single-pore osmotic power generators reported. This work extends the knowledge of osmotic energy with solid-state pores from nanoscale to mesoscale and opens up a promising avenue toward ultrahigh performance osmotic power.
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Abstract
Escalating global water scarcity necessitates high-performance desalination membranes, for which fundamental understanding of structure-property-performance relationships is required. In this study, we comprehensively assess the ionization behavior of nanoporous polyamide selective layers in state-of-the-art nanofiltration (NF) membranes. In these films, residual carboxylic acids and amines influence permeability and selectivity by imparting hydrophilicity and ionizable moieties that can exclude coions. We utilize layered interfacial polymerization to prepare physically and chemically similar selective layers of controlled thickness. We then demonstrate location-dependent ionization of carboxyl groups in NF polyamide films. Specifically, only surface carboxyl groups ionize under neutral pH, whereas interior carboxyl ionization requires pH >9. Conversely, amine ionization behaves invariably across the film. First-principles simulations reveal that the low permittivity of nanoconfined water drives the anomalous carboxyl ionization behavior. Furthermore, we report that interior carboxyl ionization could improve the water-salt permselectivity of NF membranes over fourfold, suggesting that interior charge density could be an important tool to enhance the selectivity of polyamide membranes. Our findings highlight the influence of nanoconfinement on membrane transport properties and provide enhanced fundamental understanding of ionization that could enable novel membrane design.
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107
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Le THH, Matsushita T, Ohta R, Shimoda Y, Matsui H, Kitamori T. Fabrication of Infrared-Compatible Nanofluidic Devices for Plasmon-Enhanced Infrared Absorption Spectroscopy. MICROMACHINES 2020; 11:mi11121062. [PMID: 33266007 PMCID: PMC7760999 DOI: 10.3390/mi11121062] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Revised: 11/24/2020] [Accepted: 11/27/2020] [Indexed: 12/29/2022]
Abstract
Nanofluidic devices have offered us fascinating analytical platforms for chemical and bioanalysis by exploiting unique properties of liquids and molecules confined in nanospaces. The increasing interests in nanofluidic analytical devices have triggered the development of new robust and sensitive detection techniques, especially label-free ones. IR absorption spectroscopy is one of the most powerful biochemical analysis methods for identification and quantitative measurement of chemical species in the label-free and non-invasive fashion. However, the low sensitivity and the difficulties in fabrication of IR-compatible nanofluidic devices are major obstacles that restrict the applications of IR spectroscopy in nanofluidics. Here, we realized the bonding of CaF2 and SiO2 at room temperature and demonstrated an IR-compatible nanofluidic device that allowed the IR spectroscopy in a wide range of mid-IR regime. We also performed the integration of metal-insulator-metal perfect absorber metamaterials into nanofluidic devices for plasmon-enhanced infrared absorption spectroscopy with ultrahigh sensitivity. This study also shows a proof-of-concept of the multi-band absorber by combining different types of nanostructures. The results indicate the potential of implementing metamaterials in tracking several characteristic molecular vibrational modes simultaneously, making it possible to identify molecular species in mixture or complex biological entities.
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108
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Wang Z, Hsu WL, Tsuchiya S, Paul S, Alizadeh A, Daiguji H. Joule Heating Effects on Transport-Induced-Charge Phenomena in an Ultrathin Nanopore. MICROMACHINES 2020; 11:E1041. [PMID: 33256113 PMCID: PMC7761093 DOI: 10.3390/mi11121041] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2020] [Revised: 11/21/2020] [Accepted: 11/24/2020] [Indexed: 01/14/2023]
Abstract
Transport-induced-charge (TIC) phenomena, in which the concentration imbalance between cations and anions occurs when more than two chemical potential gradients coexist within an ultrathin dimension, entail numerous nanofluidic systems. Evidence has indicated that the presence of TIC produces a nonlinear response of electroosmotic flow to the applied voltage, resulting in complex fluid behavior. In this study, we theoretically investigate thermal effects due to Joule heating on TIC phenomena in an ultrathin nanopore by computational fluid dynamics simulation. Our modeling results show that the rise of local temperature inside the nanopore significantly enhances TIC effects and thus has a significant influence on electroosmotic behavior. A local maximum of the solution conductivity occurs near the entrance of the nanopore at the high salt concentration end, resulting in a reversal of TIC across the nanopore. The Joule heating effects increase the reversal of TIC with the synergy of the negatively charged nanopore, and they also enhance the electroosmotic flow regardless of whether the nanopore is charged. These theoretical observations will improve our knowledge of nonclassical electrokinetic phenomena for flow control in nanopore systems.
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109
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Choudhary A, Joshi H, Chou HY, Sarthak K, Wilson J, Maffeo C, Aksimentiev A. High-Fidelity Capture, Threading, and Infinite-Depth Sequencing of Single DNA Molecules with a Double-Nanopore System. ACS NANO 2020; 14:15566-15576. [PMID: 33174731 PMCID: PMC8848087 DOI: 10.1021/acsnano.0c06191] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Nanopore sequencing of nucleic acids has an illustrious history of innovations that eventually made commercial nanopore sequencing possible. Nevertheless, the present nanopore sequencing technology leaves much room for improvement, especially with respect to accuracy of raw reads and detection of nucleotide modifications. Double-nanopore sequencing-an approach where a DNA molecule is pulled back and forth by a tug-of-war of two nanopores-could potentially improve single-molecule read accuracy and modification detection by offering multiple reads of the same DNA fragment. One principle difficulty in realizing such a technology is threading single-stranded DNA through both nanopores. Here, we describe and demonstrate through simulations a nanofluidic system for loading and threading DNA strands through a double-nanopore setup with nearly 100% fidelity. The high-efficiency loading is realized by using hourglass-shaped side channels that not only deliver the molecules to the nanopore but also retain molecules that missed the nanopore at the first passage to attempt the nanopore capture again. The second nanopore capture is facilitated by an orthogonal microfluidic flow that unravels the molecule captured by the first nanopore and delivers it to the capture volume of the second nanopore. We demonstrate the potential utility of our double-nanopore system for DNA sequencing by simulating repeat back-and-forth motion-flossing-of a DNA strand through the double-nanopore system. We show that repeat exposure of the same DNA fragments to the nanopore sensing volume considerably increases accuracy of the nucleotide sequence determination and that correlated displacement of ssDNA through the two nanopores may facilitate recognition of homopolymer fragments.
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110
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Davis SJ, Macha M, Chernev A, Huang DM, Radenovic A, Marion S. Pressure-Induced Enlargement and Ionic Current Rectification in Symmetric Nanopores. NANO LETTERS 2020; 20:8089-8095. [PMID: 33048551 DOI: 10.1021/acs.nanolett.0c03083] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Nanopores in solid state membranes are a tool able to probe nanofluidic phenomena or can act as a single molecular sensor. They also have diverse applications in filtration, desalination, or osmotic power generation. Many of these applications involve chemical, or hydrostatic pressure differences which act on both the supporting membrane, and the ion transport through the pore. By using pressure differences between the sides of the membrane and an alternating current approach to probe ion transport, we investigate two distinct physical phenomena: the elastic deformation of the membrane through the measurement of strain at the nanopore, and the growth of ionic current rectification with pressure due to pore entrance effects. These measurements are a significant step toward the understanding of the role of elastic membrane deformation or fluid flow on linear and nonlinear transport properties of nanopores.
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111
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Morikawa K, Kazoe Y, Takagi Y, Tsuyama Y, Pihosh Y, Tsukahara T, Kitamori T. Advanced Top-Down Fabrication for a Fused Silica Nanofluidic Device. MICROMACHINES 2020; 11:E995. [PMID: 33182488 PMCID: PMC7697862 DOI: 10.3390/mi11110995] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Revised: 10/29/2020] [Accepted: 10/29/2020] [Indexed: 02/07/2023]
Abstract
Nanofluidics have recently attracted significant attention with regard to the development of new functionalities and applications, and producing new functional devices utilizing nanofluidics will require the fabrication of nanochannels. Fused silica nanofluidic devices fabricated by top-down methods are a promising approach to realizing this goal. Our group previously demonstrated the analysis of a living single cell using such a device, incorporating nanochannels having different sizes (102-103 nm) and with branched and confluent structures and surface patterning. However, fabrication of geometrically-controlled nanochannels on the 101 nm size scale by top-down methods on a fused silica substrate, and the fabrication of micro-nano interfaces on a single substrate, remain challenging. In the present study, the smallest-ever square nanochannels (with a size of 50 nm) were fabricated on fused silica substrates by optimizing the electron beam exposure time, and the absence of channel breaks was confirmed by streaming current measurements. In addition, micro-nano interfaces between 103 nm nanochannels and 101 μm microchannels were fabricated on a single substrate by controlling the hydrophobicity of the nanochannel surfaces. A micro-nano interface for a single cell analysis device, in which a nanochannel was connected to a 101 μm single cell chamber, was also fabricated. These new fabrication procedures are expected to advance the basic technologies employed in the field of nanofluidics.
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112
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Spontaneous outflow efficiency of confined liquid in hydrophobic nanopores. Proc Natl Acad Sci U S A 2020; 117:25246-25253. [PMID: 32989153 DOI: 10.1073/pnas.2009310117] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The suspension of nanoporous particles in a nonwetting liquid provides a unique solution to the crux of superfluid, sensing, and energy conversion, yet is challenged by the incomplete outflow of intruded liquid out of nanopores for the system reusability. We report that a continuous and spontaneous liquid outflow from hydrophobic nanopores with high and stable efficiency can be achieved by regulating the confinement of solid-liquid interactions with functionalized nanopores or/and liquids. Full-scale molecular-dynamics simulations reveal that the grafted silyl chains on nanopore wall surfaces will promote the hydrophobic confinement of liquid molecules and facilitate the molecular outflow; by contrast, the introduction of ions in the liquid weakens the hydrophobic confinement and congests the molecular outflow. Both one-step and multistep well-designed quasistatic compression experiments on a series of nanopores/nonwetting liquid material systems have been performed, and the results confirm the outflow mechanism in remarkable agreement with simulations. This study offers a fundamental understanding of the outflow of confined liquid from hydrophobic nanopores, potentially useful for devising emerging nanoporous-liquid functional systems with reliable and robust reusability.
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113
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Sundaram PM, Casadei L, Lopez G, Braggio D, Balakirsky G, Pollock R, Prakash S. Multi-Layer Micro-Nanofluidic Device for Isolation and Capture of Extracellular Vesicles Derived from Liposarcoma Cell Conditioned Media. JOURNAL OF MICROELECTROMECHANICAL SYSTEMS : A JOINT IEEE AND ASME PUBLICATION ON MICROSTRUCTURES, MICROACTUATORS, MICROSENSORS, AND MICROSYSTEMS 2020; 29:776-782. [PMID: 33519169 PMCID: PMC7839931 DOI: 10.1109/jmems.2020.3006786] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We report on isolation, capture, and subsequent elution for analysis of extracellular vesicles derived from human liposarcoma cell conditioned media, using a multi-layer micro-nanofluidic device operated with tangential flow separation. Our device integrates size-based separation followed by immunoaffinity-based capture of extracellular vesicles in the same device. For liposarcomas, this is the first report on isolating, capturing, and then eluting the extracellular vesicles using a micro-nanofluidic device. The results show a significantly higher yield of the eluted extracellular vesicles (~84%) compared to the current methods of ultracentrifugation (~6%) and ExoQuick-based separations (~16%).
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114
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Ryuzaki S, Matsuda R, Taniguchi M. Pore Structures for High-Throughput Nanopore Devices. MICROMACHINES 2020; 11:mi11100893. [PMID: 32993177 PMCID: PMC7600762 DOI: 10.3390/mi11100893] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 09/25/2020] [Accepted: 09/25/2020] [Indexed: 11/16/2022]
Abstract
Nanopore devices are expected to advance the next-generation of nanobiodevices because of their strong sensing and analyzing capabilities for single molecules and bioparticles. However, the device throughputs are not sufficiently high. Although analytes pass through a nanopore by electrophoresis, the electric field gradient is localized inside and around a nanopore structure. Thus, analytes located far from a nanopore cannot be driven by electrophoresis. Here, we report nanopore structures for high-throughput sensing, namely, inverted pyramid (IP)-shaped nanopore structures. Silicon-based IP-shaped nanopore structures create a homogeneous electric field gradient within a nanopore device, indicating that most of the analytes can pass through a nanopore by electrophoresis, even though the analytes are suspended far from the nanopore entrance. In addition, the nanostructures can be fabricated only by photolithography. The present study suggests a high potential for inverted pyramid shapes to serve as nanopore devices for high-throughput sensing.
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115
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Le THH, Shimizu H, Morikawa K. Advances in Label-Free Detections for Nanofluidic Analytical Devices. MICROMACHINES 2020; 11:mi11100885. [PMID: 32977690 PMCID: PMC7598655 DOI: 10.3390/mi11100885] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Revised: 09/20/2020] [Accepted: 09/21/2020] [Indexed: 12/12/2022]
Abstract
Nanofluidics, a discipline of science and engineering of fluids confined to structures at the 1-1000 nm scale, has experienced significant growth over the past decade. Nanofluidics have offered fascinating platforms for chemical and biological analyses by exploiting the unique characteristics of liquids and molecules confined in nanospaces; however, the difficulty to detect molecules in extremely small spaces hampers the practical applications of nanofluidic devices. Laser-induced fluorescence microscopy with single-molecule sensitivity has been so far a major detection method in nanofluidics, but issues arising from labeling and photobleaching limit its application. Recently, numerous label-free detection methods have been developed to identify and determine the number of molecules, as well as provide chemical, conformational, and kinetic information of molecules. This review focuses on label-free detection techniques designed for nanofluidics; these techniques are divided into two groups: optical and electrical/electrochemical detection methods. In this review, we discuss on the developed nanofluidic device architectures, elucidate the mechanisms by which the utilization of nanofluidics in manipulating molecules and controlling light-matter interactions enhances the capabilities of biological and chemical analyses, and highlight new research directions in the field of detections in nanofluidics.
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116
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Dai C, Lin Z, Agarwal K, Mikhael C, Aich A, Gupta K, Cho JH. Self-Assembled 3D Nanosplit Rings for Plasmon-Enhanced Optofluidic Sensing. NANO LETTERS 2020; 20:6697-6705. [PMID: 32808792 DOI: 10.1021/acs.nanolett.0c02575] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Plasmonic sensors are commonly defined on two-dimensional (2D) surfaces with an enhanced electromagnetic field only near the surface, which requires precise positioning of the targeted molecules within hotspots. To address this challenge, we realize segmented nanocylinders that incorporate plasmonic (1-50 nm) gaps within three-dimensional (3D) nanostructures (nanocylinders) using electron irradiation triggered self-assembly. The 3D structures allow desired plasmonic patterns on their inner cylindrical walls forming the nanofluidic channels. The nanocylinders bridge nanoplasmonics and nanofluidics by achieving electromagnetic field enhancement and fluid confinement simultaneously. This hybrid system enables rapid diffusion of targeted species to the larger spatial hotspots in the 3D plasmonic structures, leading to enhanced interactions that contribute to a higher sensitivity. This concept has been demonstrated by characterizing an optical response of the 3D plasmonic nanostructures using surface-enhanced Raman spectroscopy (SERS), which shows enhancement over a 22 times higher intensity for hemoglobin fingerprints with nanocylinders compared to 2D nanostructures.
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117
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Abstract
Hydrodynamic collapse of a central air-cavity during the recoil phase of droplet impact on a superhydrophobic sieve leads to satellite-free generation of a single droplet through the sieve. Two modes of cavity formation and droplet ejection have been observed and explained. The volume of the generated droplet scales with the pore size. Based on this phenomenon, we propose a drop-on-demand printing technique. Despite significant advancements in inkjet technology, enhancement in mass-loading and particle-size have been limited due to clogging of the printhead nozzle. By replacing the nozzle with a sieve, we demonstrate printing of nanoparticle suspension with 71% mass-loading. Comparatively large particles of 20 μm diameter are dispensed in droplets of ~80 μm diameter. Printing is performed for surface tension as low as 32 mNm-1 and viscosity as high as 33 mPa∙s. In comparison to existing techniques, this way of printing is widely accessible as it is significantly simple and economical.
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118
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Shoda K, Tanaka M, Mino K, Kazoe Y. A Simple Low-Temperature Glass Bonding Process with Surface Activation by Oxygen Plasma for Micro/Nanofluidic Devices. MICROMACHINES 2020; 11:E804. [PMID: 32854246 PMCID: PMC7570177 DOI: 10.3390/mi11090804] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Revised: 08/11/2020] [Accepted: 08/23/2020] [Indexed: 12/18/2022]
Abstract
The bonding of glass substrates is necessary when constructing micro/nanofluidic devices for sealing micro- and nanochannels. Recently, a low-temperature glass bonding method utilizing surface activation with plasma was developed to realize micro/nanofluidic devices for various applications, but it still has issues for general use. Here, we propose a simple process of low-temperature glass bonding utilizing typical facilities available in clean rooms and applied it to the fabrication of micro/nanofluidic devices made of different glasses. In the process, the substrate surface was activated with oxygen plasma, and the glass substrates were placed in contact in a class ISO 5 clean room. The pre-bonded substrates were heated for annealing. We found an optimal concentration of oxygen plasma and achieved a bonding energy of 0.33-0.48 J/m2 in fused-silica/fused-silica glass bonding. The process was applied to the bonding of fused-silica glass and borosilicate glass, which is generally used in optical microscopy, and revealed higher bonding energy than fused-silica/fused-silica glass bonding. An annealing temperature lower than 200 °C was necessary to avoid crack generation by thermal stress due to the different thermal properties of the glasses. A fabricated micro/nanofluidic device exhibited a pressure resistance higher than 600 kPa. This work will contribute to the advancement of micro/nanofluidics.
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119
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Abstract
The DNA of our cells is constantly exposed to various types of damaging agents. One of the most critical types of damage is when both strands of the DNA break, and thus such breaks need to be efficiently repaired. It is known that CtIP promotes nucleases in DNA break repair. Here we show that CtIP can also hold the two DNA strands together in solution when DNA is free to move, using novel methodology that allows the monitoring of thousands of single DNA molecules in nanofabricated devices. DNA bridging likely facilitates the enzymatic repair steps and identifies novel CtIP functions that are crucial for repairing broken DNA. The early steps of DNA double-strand break (DSB) repair in human cells involve the MRE11-RAD50-NBS1 (MRN) complex and its cofactor, phosphorylated CtIP. The roles of these proteins in nucleolytic DSB resection are well characterized, but their role in bridging the DNA ends for efficient and correct repair is much less explored. Here we study the binding of phosphorylated CtIP, which promotes the endonuclease activity of MRN, to single long (∼50 kb) DNA molecules using nanofluidic channels and compare it to the yeast homolog Sae2. CtIP bridges DNA in a manner that depends on the oligomeric state of the protein, and truncated mutants demonstrate that the bridging depends on CtIP regions distinct from those that stimulate the nuclease activity of MRN. Sae2 is a much smaller protein than CtIP, and its bridging is significantly less efficient. Our results demonstrate that the nuclease cofactor and structural functions of CtIP may depend on the same protein population, which may be crucial for CtIP functions in both homologous recombination and microhomology-mediated end-joining.
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120
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Zhou T, Ge J, Shi L, Liu Z, Deng Y, Peng Y, He X, Tang R, Wen L. Electrokinetic Translocation of a Deformable Nanoparticle through a Nanopore. ACS APPLIED BIO MATERIALS 2020; 3:5160-5168. [PMID: 35021692 DOI: 10.1021/acsabm.0c00606] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The nanopore-based biosensing technology is built up on the fluctuation of the ionic current induced by the electrokinetic translation of a particle penetrating the nanopore. It is expected that the current change of a deformable bioparticle is dissimilar from that of a rigid one. This study theoretically investigated the transient translocation process of a deformable particle through a nanopore for the first time. The mathematical model considers the Poisson equation for the electric potential, the Nernst-Planck equations for the ionic transport, the Navier-Stokes equations for the flow field, and the stress-strain equation for the dynamics of the deformable bioparticle. The arbitrary Lagrangian-Eulerian method is used for the fully coupled particle-fluid dynamic interaction. Results show that the deformation degree of the particle, the velocity deviation, and the current is different from the rigid particle. The deformation degree of the particle will reach the maximum when the particle passes a nanopore. Because of the deformation of particles, the total force applied on deformable particles is larger than that of rigid particles, resulting in larger velocity deviation and current deviation. The influences of the ratio of the nanoparticle radius to the Debye length and surface charge density of the nanopore are also studied. The research results illustrate the translocation mechanism of a deformable nanoparticle in the nanopore, which can provide theoretical guidance for the biosensing technology based on the nanopore.
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121
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Wagemann E, Misra S, Das S, Mitra SK. Quantifying Water Friction in Misaligned Graphene Channels under Ångström Confinements. ACS APPLIED MATERIALS & INTERFACES 2020; 12:35757-35764. [PMID: 32662264 DOI: 10.1021/acsami.0c10445] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Two-dimensional (2D) materials, such as graphene (GE), hold great potential to be employed as the fundamental building blocks of novel nanofluidic devices for a wide range of applications. Recent advances in experimental techniques are materializing such prospects by enabling the assembly of 2D material-based fluidic channels with heights as small as few Ångströms. Here, we conduct molecular dynamics simulations to probe the effect of the relative misalignment between the walls of the GE fluidic channel with Ångströms height on the resistance to water transport through the channel. Two types of misalignments are studied, namely, translational and rotational misalignments. Our results show that the relative misalignment of the GE lattices can lead to a substantial reduction in the friction between water and the channel walls. Moreover, a dependence of the friction on the degree of misalignment and flow direction is found for the cases with translational misalignment. In contrast, the resistance exerted by the channels with rotational misalignment is found to be independent of the rotation angle (θ) for 0° < θ < 60° but always lower than the perfectly aligned case. We associate such lowering of the resistance to water transport to the corrugation and the anisotropy in the corresponding potential energy landscape associated with each degree of misalignment. The findings, therefore, point to an unprecedented possibility of significantly enhancing the water transport in Ångströms height GE channels by engineering the misalignments of the GE channel walls.
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Xiao K, Wan C, Jiang L, Chen X, Antonietti M. Bioinspired Ionic Sensory Systems: The Successor of Electronics. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e2000218. [PMID: 32500602 DOI: 10.1002/adma.202000218] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 03/30/2020] [Accepted: 03/30/2020] [Indexed: 06/11/2023]
Abstract
All biological systems, including animals and plants, communicate in a language of ions and small molecules, while the modern information infrastructures and technologies rely on a language of electrons. Although electronics and bioelectronics have made great progress in the past several decades, they still face the disadvantage of signal transformation when communicating with biology. To narrow the gap between biological systems and artificial-intelligence systems, bioinspired ion-transport-based sensory systems should be developed as successor of electronics, since they can emulate biological functionality more directly and communicate with biology seamlessly. Herein, the essential principles of (accurate) ion transport are introduced, and the recent progress in the development of three elements of an ionic sensory system is reviewed: ionic sensors, ionic processors, and ionic interfaces. The current challenges and future developments of ion-transport-based sensory systems are also discussed.
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Liu Y, Wu P. Chirally Reversed Graphene Oxide Liquid Crystals. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2020; 7:2001269. [PMID: 32832370 PMCID: PMC7435251 DOI: 10.1002/advs.202001269] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Revised: 04/26/2020] [Indexed: 05/23/2023]
Abstract
Colloidal liquid crystals (LCs) formed by nanoparticles hold great promise for creating new structures and topologies. However, achieving highly ordered hierarchical architectures and stable topological configurations is extremely challenging, mainly due to the liquid-like fluidity of colloidal LCs in nature. Herein, an innovative synchronous nanofluidic rectification (SNR) technique for generating ultralong graphene oxide (GO) liquid crystal (GOLC) fibers with hierarchical core-skin architectures is presented, in which the GO sheet assemblies and hydrogel skin formation are synchronous. The SNR technique conceptually follows two design principles: horizontal polymer-flow promotes the rapid planar alignment of GO sheets and drives the chiral-reversing of cholesteric GOLCs, and in situ formed hydrogel skin affords some protection against environmental impact to maintain stable topological configurations. Importantly, the dried fibers retain the smooth surface and ordered internal structures, achieving high mechanical strength and flexibility. The linear and circular polarization potential of GOLC fibers are demonstrated for optical sensing and recognition. This work may open an avenue toward the scalable manufacture of uniform and robust, yet highly anisotropic, fiber-shaped functional materials with complex internal architectures.
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The Influence of Electric Field Intensity and Particle Length on the Electrokinetic Transport of Cylindrical Particles Passing through Nanopore. MICROMACHINES 2020; 11:mi11080722. [PMID: 32722448 PMCID: PMC7463976 DOI: 10.3390/mi11080722] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 07/22/2020] [Accepted: 07/22/2020] [Indexed: 01/08/2023]
Abstract
The electric transport of nanoparticles passing through nanopores leads to a change in the ion current, which is essential for the detection technology of DNA sequencing and protein determination. In order to further illustrate the electrokinetic transport mechanism of particles passing through nanopores, a fully coupled continuum model is constructed by using the arbitrary Lagrangian–Eulerian (ALE) method. The model consists of the electric field described by the Poisson equation, the concentration field described by Nernst–Planck equation, and the flow field described by the Navier–Stokes equation. Based on this model, the influence of imposed electric field and particle length on the electrokinetic transport of cylindrical particles is investigated. It is found firstly the translation velocities for the longer particles remain constant when they locate inside the nanopore. Both the ion current blockade effect and the ion current enhancement effect occur when cylindrical particles enter and exit the nanopore, respectively, for the experimental parameters employed in this research. Moreover, the particle translation velocity and current fluctuation amplitude are dominated by the electric field intensity, which can be used to adjust the particle transmission efficiency and the ion current detectability. In addition, the increase in particle length changes the particle position corresponding to the peak value of the ion current, which contributes to distinguishing particles with different lengths as well.
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Bioinspired nervous signal transmission system based on two-dimensional laminar nanofluidics: From electronics to ionics. Proc Natl Acad Sci U S A 2020; 117:16743-16748. [PMID: 32611809 PMCID: PMC7382253 DOI: 10.1073/pnas.2005937117] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Mammalian nervous systems, as natural ionic circuitries, have interested researchers with their powerful abilities in environmental perceptions and information transmission, which triggered booming development in artificial prototypes such as biomimetic ionic nanochannels. Most studied artificial ionic systems are more focused on their functions of perception, whereas the ionic information transmission system is rarely reported. Here, two-dimensional laminar nanofluidics are fabricated from MXene nanosheets and the noncontact external electrostatic potential applied patterns to generate and transmit alternating signals, from basic sine to frequency-modulated binary information. This work demonstrates the potentiality of bioinspired nervous signal transmission to simulate the neural ion-carried information system, which might lead to the avenue of alternating current ionics. Mammalian nervous systems, as natural ionic circuitries, stand out in environmental perception and sophisticated information transmission, relying on protein ionic channels and additional necessary structures. Prosperously emerged ionic regulated biomimetic nanochannels exhibit great potentialities in various application scenarios, especially signal transduction. Most reported direct current systems possess deficiencies in informational density and variability, which are superiorities of alternating current (AC) systems and necessities in bioinspired nervous signal transmission. Here, inspired by myelinated saltatory conduction, alternating electrostatic potential controlled nanofluidics are constructed with a noncontact application pattern and MXene nanosheets. Under time-variant external stimuli, ions confined in the interlaminar space obtain the capability of carriers for the AC ionic circuit. The transmitted information is accessible from typical sine to a frequency-modulated binary signal. This work demonstrates the potentiality of the bioinspired nervous signal transmission between electronics and ionic nanofluidics, which might push one step forward to the avenue of AC ionics.
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