51
|
Becker J, Modl T, Gessner VH. Methandiide as a Non-Innocent Ligand in Carbene Complexes: From the Electronic Structure to Bond Activation Reactions and Cooperative Catalysis. Chemistry 2014; 20:11295-9. [DOI: 10.1002/chem.201404131] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2014] [Indexed: 11/06/2022]
|
52
|
Hu B, Chen D, Hu X. Synthesis and Reactivity of Mononuclear Iron Models of [Fe]-Hydrogenase that Contain an Acylmethylpyridinol Ligand. Chemistry 2014; 20:1677-82. [DOI: 10.1002/chem.201304290] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2013] [Indexed: 11/06/2022]
|
53
|
Lumsden SEA, Durgaprasad G, Thomas Muthiah KA, Rose MJ. Tuning coordination modes of pyridine/thioether Schiff base (NNS) ligands to mononuclear manganese carbonyls. Dalton Trans 2014; 43:10725-38. [DOI: 10.1039/c4dt00600c] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Manganese carbonyls are ligated by pyridine/thioether Schiff base (NNS) ligands. Coordination of the thioether-S donor to the Mn(i) center is determined by subtle steric changes at the ligand periphery.
Collapse
|
54
|
Song LC, Hu FQ, Wang MM, Xie ZJ, Xu KK, Song HB. Synthesis, structural characterization, and some properties of 2-acylmethyl-6-ester group-difunctionalized pyridine-containing iron complexes related to the active site of [Fe]-hydrogenase. Dalton Trans 2014; 43:8062-71. [DOI: 10.1039/c4dt00335g] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The first four acylmethyl/ester group-disubstituted pyridine-containing models for [Fe]-hydrogenase have been synthesized and crystallographically characterized.
Collapse
Affiliation(s)
- Li-Cheng Song
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| | - Fu-Qiang Hu
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| | - Miao-Miao Wang
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| | - Zhao-Jun Xie
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| | - Kai-Kai Xu
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| | - Hai-Bin Song
- Department of Chemistry
- State Key Laboratory of Elemento-Organic Chemistry
- and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin)
- Nankai University
- Tianjin 300071, China
| |
Collapse
|
55
|
Finkelmann AR, Senn HM, Reiher M. Hydrogen-activation mechanism of [Fe] hydrogenase revealed by multi-scale modeling. Chem Sci 2014. [DOI: 10.1039/c4sc01605j] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
A complete atomistic model of [Fe] hydrogenase reveals important details of its mechanism.
Collapse
Affiliation(s)
| | - Hans Martin Senn
- WestCHEM and School of Chemistry
- University of Glasgow
- Glasgow G12 8QQ
- UK
| | - Markus Reiher
- Laboratory of Physical Chemistry
- ETH Zürich
- Zürich
- Switzerland
| |
Collapse
|
56
|
Tamura H, Salomone-Stagni M, Fujishiro T, Warkentin E, Meyer-Klaucke W, Ermler U, Shima S. Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H2-Activation Site. Angew Chem Int Ed Engl 2013; 52:9656-9. [DOI: 10.1002/anie.201305089] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Indexed: 01/08/2023]
|
57
|
Crystal Structures of [Fe]-Hydrogenase in Complex with Inhibitory Isocyanides: Implications for the H2-Activation Site. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201305089] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
|
58
|
|
59
|
|
60
|
Song LC, Zhao GY, Xie ZJ, Zhang JW. A Novel Acylmethylpyridinol Ligand Containing Dinuclear Iron Complex Closely Related to [Fe]-Hydrogenase. Organometallics 2013. [DOI: 10.1021/om400240e] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Li-Cheng Song
- Department of Chemistry, State
Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, People’s
Republic of China
| | - Gao-Yu Zhao
- Department of Chemistry, State
Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, People’s
Republic of China
| | - Zhao-Jun Xie
- Department of Chemistry, State
Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, People’s
Republic of China
| | - Ji-Wei Zhang
- Department of Chemistry, State
Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, People’s
Republic of China
| |
Collapse
|
61
|
Schultz KM, Chen D, Hu X. [Fe]-Hydrogenase and Models that Contain IronAcyl Ligation. Chem Asian J 2013; 8:1068-75. [DOI: 10.1002/asia.201300232] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2013] [Indexed: 11/06/2022]
|
62
|
Finkelmann AR, Stiebritz MT, Reiher M. Kinetic modeling of hydrogen conversion at [Fe] hydrogenase active-site models. J Phys Chem B 2013; 117:4806-17. [PMID: 23560849 DOI: 10.1021/jp312662y] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
By means of density functional theory, we investigate the catalytic cycle of active-site model complexes of [Fe] hydrogenase and study how ligand substitutions in the first coordination sphere of the reactive Fe center affect the free-energy surface of the whole reaction pathway. Interestingly, dispersion interactions between the active site and the hydride acceptor MPT render the hydride transfer step less endergonic and lower its barrier. Substitution of CO by CN(-), which resembles [FeFe] hydrogenase-like coordination, inverts the elementary steps H(-) transfer and H2 cleavage. A simplified kinetic model reveals the specifics of the interplay between active-site composition and catalysis. Apparently, the catalytic efficiency of [Fe] hydrogenase can be attributed to a flat energy profile throughout the catalytic cycle. Intermediates that are too stable, as they occur, e.g., when one CO ligand is substituted by CN(-), significantly slow down the turnover rate of the enzyme. The catalytic activity of the wild-type form of the active-site model could, however, be enhanced by a PH3 ligand substitution of the CO ligand.
Collapse
Affiliation(s)
- Arndt R Finkelmann
- Laboratorium für Physikalische Chemie, ETH Zurich, Wolfgang-Pauli-Str. 10, 8093 Zurich, Switzerland
| | | | | |
Collapse
|
63
|
Hu B, Chen D, Hu X. Reversible Dimerization of Mononuclear Models of [Fe]-Hydrogenase. Chemistry 2013; 19:6221-4. [DOI: 10.1002/chem.201300495] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2013] [Indexed: 11/12/2022]
|
64
|
Turrell PJ, Hill AD, Ibrahim SK, Wright JA, Pickett CJ. Ferracyclic carbamoyl complexes related to the active site of [Fe]-hydrogenase. Dalton Trans 2013; 42:8140-6. [DOI: 10.1039/c3dt50642h] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
65
|
|
66
|
|
67
|
Praneeth VKK, Ringenberg MR, Ward TR. Redox-Active Ligands in Catalysis. Angew Chem Int Ed Engl 2012; 51:10228-34. [DOI: 10.1002/anie.201204100] [Citation(s) in RCA: 277] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2012] [Indexed: 11/10/2022]
|
68
|
Yao L, Qin L, Yu S. Self‐Assembly of Nano‐Sized Neutral Metal–Organic Macrocycles from Bis(β‐diketone) Ligands. Chem Asian J 2012; 7:2555-8. [DOI: 10.1002/asia.201200588] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2012] [Indexed: 01/23/2023]
Affiliation(s)
- Liao‐Yuan Yao
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
| | - Lin Qin
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
| | - Shu‐Yan Yu
- Laboratory for Self‐Assembly Chemistry, Department of Chemistry, Renmin University of China, Beijing 100872 (P.R. China), Fax: (+86) 10‐6251‐6614
| |
Collapse
|
69
|
Long L, Xiao Z, Zampella G, Wei Z, De Gioia L, Liu X. The reactions of pyridinyl thioesters with triiron dodecacarbonyl: their novel diiron carbonyl complexes and mechanistic investigations. Dalton Trans 2012; 41:9482-92. [PMID: 22751866 DOI: 10.1039/c2dt30798g] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Reaction of Fe(3)(CO)(12) with pyridinyl thioester ligand PyCH(2)SCOCH(3) (L(1), Py = pyridin-2-yl) produced complex, [Fe(2)(κ-COCH(3))(μ-SCH(2)Py)(CO)(5)] (1) (PyCH(2)S = pyridin-2-ylmethanethiolate). When complex 1 reacted with PPh(3), a monosubstituted complex, [Fe(2)(κ-COCH(3))(μ-SCH(2)Py)(CO)(4)PPh(3)] (2), was derived. Reaction of the same precursor with analogous thioester ligand PyCH(2)SCOPy (L(2)) generated three novel diiron complexes, [Fe(2)(κ-Py)(μ-SCH(2)Py)(CO)(5)] (3), [Fe(2)(κ-Py)'(μ-SCH(2)Py)(CO)(5)] (4), and [Fe(2)(κ-Py)(μ-SCH(2)Py)(CO)(6)] (5). Complexes 3 and 4 are structural isomers. Complex 5 could be converted into complex 4 but the conversion from complex 5 to the isomer 3 was not observed. All the five complexes were fully characterised using FTIR, NMR, and other techniques. Their structures were determined using X-ray single crystal diffraction analysis. The oxidative formation of complexes 1, 3, 4, and 5 involved C-S and/or C-C bonds cleavages. To probe possible mechanisms for these cleavages, DFT calculations were performed. From the calculations, viable reaction pathways leading to the formation of all the isolated products were delineated. The results of the theoretic calculations also allowed rationalisation of the experimental observations.
Collapse
Affiliation(s)
- Li Long
- Department of Chemistry, Nanchang University, Nanchang 330031, China
| | | | | | | | | | | |
Collapse
|
70
|
Song LC, Xie ZJ, Wang MM, Zhao GY, Song HB. Biomimetic Models for the Active Site of [Fe]Hydrogenase Featuring an Acylmethyl(hydroxymethyl)pyridine Ligand. Inorg Chem 2012; 51:7466-8. [DOI: 10.1021/ic301146u] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Li-Cheng Song
- State Key Laboratory of Elemento−Organic
Chemistry, Department of Chemistry, Nankai University, Tianjin 300071, China
| | - Zhao-Jun Xie
- State Key Laboratory of Elemento−Organic
Chemistry, Department of Chemistry, Nankai University, Tianjin 300071, China
| | - Miao-Miao Wang
- State Key Laboratory of Elemento−Organic
Chemistry, Department of Chemistry, Nankai University, Tianjin 300071, China
| | - Gao-Yu Zhao
- State Key Laboratory of Elemento−Organic
Chemistry, Department of Chemistry, Nankai University, Tianjin 300071, China
| | - Hai-Bin Song
- State Key Laboratory of Elemento−Organic
Chemistry, Department of Chemistry, Nankai University, Tianjin 300071, China
| |
Collapse
|
71
|
Schick M, Xie X, Ataka K, Kahnt J, Linne U, Shima S. Biosynthesis of the Iron-Guanylylpyridinol Cofactor of [Fe]-Hydrogenase in Methanogenic Archaea as Elucidated by Stable-Isotope Labeling. J Am Chem Soc 2012; 134:3271-80. [DOI: 10.1021/ja211594m] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Michael Schick
- Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch Strasse 10, 35043 Marburg, Germany
| | - Xiulan Xie
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein Strasse, 35032 Marburg, Germany
| | - Kenichi Ataka
- Department of Physics, Freie-Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Jörg Kahnt
- Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch Strasse 10, 35043 Marburg, Germany
| | - Uwe Linne
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein Strasse, 35032 Marburg, Germany
| | - Seigo Shima
- Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch Strasse 10, 35043 Marburg, Germany
- PRESTO, Japan Science and Technology Agency (JST), Honcho, Kawaguchi, Saitama 332-0012, Japan
| |
Collapse
|
72
|
Chen D, Scopelliti R, Hu X. Reversible Protonation of a Thiolate Ligand in an [Fe]-Hydrogenase Model Complex. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201107634] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
73
|
Chen D, Scopelliti R, Hu X. Reversible Protonation of a Thiolate Ligand in an [Fe]-Hydrogenase Model Complex. Angew Chem Int Ed Engl 2012; 51:1919-21. [DOI: 10.1002/anie.201107634] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2011] [Indexed: 11/07/2022]
|
74
|
Shima S, Schick M, Kahnt J, Ataka K, Steinbach K, Linne U. Evidence for acyl–iron ligation in the active site of [Fe]-hydrogenase provided by mass spectrometry and infrared spectroscopy. Dalton Trans 2012; 41:767-71. [DOI: 10.1039/c1dt11093d] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
|
75
|
Wacker-Siliconpreis: M. Drieß / Nationaler Latsis-Preis: K. Gademann / OMCOS-Preis: F. Glorius / Werner-Preis: X. Hu. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201107080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
76
|
Wacker Silicone Award: M. Driess / National Latsis Prize: K. Gademann / OMCOS Award: F. Glorius / Werner Prize: X. Hu. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/anie.201107080] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
|