Disproportionation of elemental sulfur by haloalkaliphilic bacteria from soda lakes

Functional microbiology of soda lakes

Soda lakes represent unique permanently haloalkaline system. Despite the harsh conditions, they are inhabited by abundant, mostly prokaryotic, microbial communities. This review summarizes results of studies of main functional groups of the soda lake prokaryotes responsible for carbon, nitrogen and sulfur cycling, including oxygenic and anoxygenic phototrophs, aerobic chemolithotrophs, fermenting and respiring anaerobes. The main conclusion from this work is that the soda lakes are very different from other high-salt systems in respect to microbial richness and activity. The reason for this difference is determined by the major physico-chemical features of two dominant salts - NaCl in neutral saline systems and sodium carbonates in soda lakes, that are influencing the amount of energy required for osmotic adaptation.

Microbial diversity in a permanently cold and alkaline environment in Greenland

The submarine ikaite columns located in the Ikka Fjord in Southern Greenland represent a unique, permanently cold (less than 6°C) and alkaline (above pH 10) environment and are home to a microbial community adapted to these extreme conditions. The bacterial and archaeal community inhabiting the ikaite columns and surrounding fjord was characterised by high-throughput pyrosequencing of 16S rRNA genes. Analysis of the ikaite community structure revealed the presence of a diverse bacterial community, both in the column interior and at the surface, and very few archaea. A clear difference in overall taxonomic composition was observed between column interior and surface. Whereas the surface, and in particular newly formed ikaite material, was primarily dominated by Cyanobacteria and phototrophic Proteobacteria, the column interior was dominated by Proteobacteria and putative anaerobic representatives of the Firmicutes and Bacteroidetes. The results suggest a stratification of the ikaite columns similar to that of classical soda lakes, with a light-exposed surface inhabited by primary producers and an anoxic subsurface. This was further supported by identification of major taxonomic groups with close relatives in soda lake environments, including members of the genera Rhodobaca, Dethiobacter, Thioalkalivibrio and Tindallia, as well as very abundant groups related to uncharacterised environmental sequences originally isolated from Mono Lake in California.

Microbial diversity and biogeochemical cycling in soda lakes

Soda lakes contain high concentrations of sodium carbonates resulting in a stable elevated pH, which provide a unique habitat to a rich diversity of haloalkaliphilic bacteria and archaea. Both cultivation-dependent and -independent methods have aided the identification of key processes and genes in the microbially mediated carbon, nitrogen, and sulfur biogeochemical cycles in soda lakes. In order to survive in this extreme environment, haloalkaliphiles have developed various bioenergetic and structural adaptations to maintain pH homeostasis and intracellular osmotic pressure. The cultivation of a handful of strains has led to the isolation of a number of extremozymes, which allow the cell to perform enzymatic reactions at these extreme conditions. These enzymes potentially contribute to biotechnological applications. In addition, microbial species active in the sulfur cycle can be used for sulfur remediation purposes. Future research should combine both innovative culture methods and state-of-the-art 'meta-omic' techniques to gain a comprehensive understanding of the microbes that flourish in these extreme environments and the processes they mediate. Coupling the biogeochemical C, N, and S cycles and identifying where each process takes place on a spatial and temporal scale could unravel the interspecies relationships and thereby reveal more about the ecosystem dynamics of these enigmatic extreme environments.

Activity of zero-valent sulfur in sulfidic natural waters

BACKGROUND

Ionic and molecular carriers of dissolved (filter-passing) zero-valent sulfur (S⁰) in anaerobic natural waters include polysulfides, S_n^2-, molecular S₈(aq), organic macromolecules and certain higher valent thioanions. Because S⁰ is rapidly transferred among these various carriers, its biogeochemical roles in such processes as dehalogenation of organic compounds, chelation of trace metals, and anaerobic microbial metabolism are not determined solely by one ionic or molecular species. Here, S⁰ is treated collectively as a virtual thermodynamic component, and computational as well as graphical methods for quantifying its activity (a_S0) in natural waters are presented. From a_S0, concentrations of the ionic and molecular carriers of S⁰ can be calculated easily.

RESULTS

Concentration ratios of any two polysulfide ions define a_S0 (Method I). Unfortunately these concentrations are often too low in nature for accurate quantification with current methods. Measurements of total divalent sulfur (ΣS^-II), zero-valent sulfur (ΣS⁰) and pH provide a more widely applicable approach (Method II). Systematic errors in ΣS⁰ measurements are the main limit to accuracy of this method at the present time. Alternative methods based on greigite solubility and potentiometry are discussed. A critical comparison of Methods I and II reveals inconsistencies at low ΣS⁰/ΣS^-II that imply errors in the thermodynamic data for HS₂^- and S₂^-. For samples having low ΣS⁰/ΣS^-II, an interim remedy is recommended: letting pK_a2 = 6.3 for all HS_n^- ions.

CONCLUSIONS

Newly assembled data for a_S0 in a selection of anaerobic natural waters indicate that S⁰ is always metastable in the surveyed samples with respect to disproportionation to sulfide and sulfate. In all the surveyed environments, sulfur-rich minerals, such as greigite, covellite and orpiment, are stable in preference to their sulfur-poor cohorts, mackinawite, chalcocite and realgar. The a_S0 values in the dataset span conditions favoring Hg-polysulfide complexes vs. Hg-sulfide complexes, implying that a_S0 could affect Hg-methylation rates in nature. No support is found for the common assumption that a_S0 = 1 in reducing natural waters. This paper calls attention to an urgent need for improved measurement methods, especially for total zero-valent sulfur, as well as new determinations of ionization constants for all HS_n^- species.

Occurrence of surface polysulfides during the interaction between ferric (hydr)oxides and aqueous sulfide

Polysulfides are often referred to as key reactants in the sulfur cycle, especially during the interaction of ferric (hydr)oxides and sulfide, forming ferrous-sulphide minerals. Despite their potential relevance, the extent of polysulfide formation and its relevance for product formation pathways remains enigmatic. We applied cryogenic X-ray Photoelectron Spectroscopy and wet chemical analysis to study sulfur oxidation products during the reaction of goethite and lepidocrocite with aqueous sulfide at different initial Fe/S molar ratios under anoxic conditions at neutral pH. The higher reactivity of lepidocrocite leads to faster and higher electron turnover compared to goethite. We were able to demonstrate for the first time the occurrence of surface-associated polysulfides being the main oxidation products in the presence of both minerals, with a predominance of disulfide (S2(2-)(surf)), and elemental sulfur. Concentrations of aqueous polysulfide species were negligible (<1%). With prior sulfide fixation by zinc acetate, the surface-associated polysulfides could be precipitated as zerovalent sulfur (S°), which was extracted by methanol thereafter. Of the generated S°, 20-34% were associated with S2(2-)(surf). Varying the Fe/S ratio revealed that surface polysulfide formation only becomes dominant when the remaining aqueous sulfide concentration is low (<0.03 mmol L(-1)). We hypothesize these novel surface sulfur species, particularly surface disulfide, to act as pyrite precursors. We further propose that these species play an overlooked role in the sulfur cycle.