Molecular recognition and supramolecular self-assembly of a genetically engineered gold binding peptide on Au{111}

Single-step fabrication of patterned gold film array by an engineered multi-functional peptide

This study constitutes a demonstration of the biological route to controlled nano-fabrication via modular multi-functional inorganic-binding peptides. Specifically, we use gold- and silica-binding peptide sequences, fused into a single molecule via a structural peptide spacer, to assemble pre-synthesized gold nanoparticles on silica surface, as well as to synthesize nanometallic particles in situ on the peptide-patterned regions. The resulting film-like gold nanoparticle arrays with controlled spatial organization are characterized by various microscopy and spectroscopy techniques. The described bio-enabled, single-step synthetic process offers many advantages over conventional approaches for surface modifications, self-assembly and device fabrication due to the peptides' modularity, inherent biocompatibility, material specificity and catalytic activity in aqueous environments. Our results showcase the potential of artificially-derived peptides to play a key role in simplifying the assembly and synthesis of multi-material nano-systems in environmentally benign processes.

Reverse self-assembly: (111)-oriented gold crystallization at alkylthiol monolayer templates

It has long been known that thiol-terminated molecules self-assemble as commensurate monolayers on Au(111) surfaces. By spreading floating octadecanethiol monolayers on aqueous solutions of chloroauric acid (HAuCl4) and using x rays to reduce the gold ions as well as to probe the structure, we have observed the nucleation of (111)-oriented Au nanoparticles at thiol surfaces. This process may be similar to the formation of biogenic gold by bacteria. The thiol monolayer acts as a "soft template," changing its structure as Au crystals form so that there is a sqrt[3]×sqrt[3] commensurate relationship.

Platinum nanocrystals selectively shaped using facet-specific peptide sequences

The properties of a nanocrystal are heavily influenced by its shape. Shape control of a colloidal nanocrystal is believed to be a kinetic process, with high-energy facets growing faster then vanishing, leading to nanocrystals enclosed by low-energy facets. Identifying a surfactant that can specifically bind to a particular crystal facet is critical, but has proved challenging to date. Biomolecules have exquisite specific molecular recognition properties that can be explored for the precise engineering of nanostructured materials. Here, we report the use of facet-specific peptide sequences as regulating agents for the predictable synthesis of platinum nanocrystals with selectively exposed crystal surfaces and particular shapes. The formation of platinum nanocubes and nanotetrahedrons are demonstrated with Pt-{100} and Pt-{111} binding peptides, respectively. Our studies unambiguously demonstrate the abilities of facet-selective binding peptides in determining nanocrystal shape, representing a critical step forward in the use of biomolecules for programmable synthesis of nanostructures.

Peptide interactions with metal and oxide surfaces

Increasing interest in bio-interfaces for medical, diagnostic, or biotechnology applications has highlighted the critical scientific challenge behind both the understanding and control of protein-solid surface interactions. In this context, this Account focuses on the molecular-level characterization of the interactions of peptides, ranging in size from a few amino acids to long sequences, with metal and oxide surfaces. In this Account, we attempt to fill the gap between the well-known basic studies of the interaction of a single amino acid with well-defined metal surfaces and the investigations aimed at controlling biocompatibility or biofilm growth processes. We gather studies performed with surface science tools and macroscopic characterization techniques along with those that use modeling methods, and note the trends that emerge. Sulfur drives the interaction of cysteine-containing peptides with metal surfaces, particularly gold. Moreover, intermolecular interactions, such as hydrogen bonds may induce surface self assembly and chiral arrangements of the peptide layer. Depending on the solvent pH and composition, carboxylates or amino groups may also interact with the surface, which could involve conformational changes in the adsorbed peptide. On oxide surfaces such as titania or silica, researchers have identified carboxylate groups as the preferential peptide binding groups because of their strong electrostatic interactions with the charged surface. In high molecular weight peptides, systematic studies of their interaction with various oxide surfaces point to the preferential interaction of certain peptide sequences: basic residues such as arginine assume a special role. Researchers have successfully used these observations to synthesize adhesive sequences and initiate biomineralization. Studies of the interaction of peptides with nanoparticles have revealed similar binding trends. Sulfur-containing peptides adhere preferentially to gold nanoparticles. Peptides containing aromatic nitrogen also display a high affinity for various inorganic nanoparticles. Finally, we describe a novel class of peptides, genetically engineered peptides for inorganics (GEPIs), which are selected from a phage display protocol for their high binding affinity for inorganic surfaces. Extended investigations have focused on the mechanisms of the molecular binding of these peptides to solid surfaces, in particular the high binding affinity of some sulfur-free sequences of GEPIs to gold or platinum surfaces. We expect that this clearer view of the possible preferential interactions between peptides and inorganic surfaces will facilitate the development of new, more focused research in various fields of biotechnology, such as biocompatibility, biomimetics, or tissue engineering.

Biological surface effects of metallic nanomaterials for applications in assembly and catalysis

Recent experimental evidence has suggested that bioinspired techniques represent promising avenues toward the production of functional nanomaterials that possess a high degree of activity. These materials are prepared under synthetically simple and efficient conditions, thus making them attractive alternatives to many traditional methods that employ hazardous and harsh conditions. Many biomimetic methods employ peptide and amino acid binding events on the surfaces of nanostructures to generate materials that are stable in solution. The basis of both the stability and activity of these materials is likely to be controlled by the biotic/abiotic interface, which is mediated by the bioligand binding process. Unfortunately, most readily available techniques are unable to be used to study this intrinsic process; however, very recent studies have begun to shed light on this important event. In this feature article, an overview of the understanding of peptide and amino acid binding events to nanomaterials and how these motifs can be exploited for activities in nanoparticle assembly and catalytic reactivity is discussed. From both 2D surface studies and computational modeling analyses, different biomolecule binding characteristics have been elucidated. These results indicate that the amino acid sequence and peptide secondary structure play important roles in the binding capability. Furthermore, these studies suggest that the peptides are able to form specific patterns and motifs once bound to the nanoparticle surface. This attribute could affect the nanoparticle electronics and can play a significant role in their activities to generate functional materials. From these binding motifs, the ability of reagents to interact with the metallic surface is possible, thus affecting many of the properties of these materials.

Understanding the mechanism of amino acid-based Au nanoparticle chain formation

Understanding the surface orientation and interactions between biomolecules and nanoparticles is important in order to determine their effects on the final structure and activity. At present, limited analytical techniques are available to probe these interactions, especially for materials dispersed in solution. We recently demonstrated that arginine, a simple amino acid, is able to bind to the surface of Au nanoparticles in a segregated pattern, which produces an electronic dipole across the structure. As a result, the formation of linear chains of Au nanoparticles occurred that was dependent upon of the concentration of arginine. Here, we present new information concerning the mechanism of assembly and demonstrate unique reaction conditions that can be used to directly control the assembly rate, and thus the size of the final superstructure that is produced. The assembly process was modulated by the arginine/Au nanoparticle ratio, the temperature of the system, the dielectric of the solvent, and the solution ionic strength, all of which can be used in combination to control the process. These effects were monitored using UV-vis spectroscopy, transmission electron microscopy, and dynamic light scattering. From these results, it is suggested that the second step of the assembly process, which is the formation of nanoparticle chains mediated by Brownian motion, controls the overall assembly rate and thus the size and orientation of the final superstructure produced. Furthermore, the reaction kinetics of the system have been studied from which rate constants and activity energies have been extracted for electrostatic-based nanoparticle assembly. This analysis indicates that the assembly/organization step is likely broken into two substeps with the formation of nanoparticle dimers occurring in solution first, followed by the oligomerization of the dimers to form the linear and branched chains. The dimerization step follows traditional second-order kinetics and is relatively fast, while the oligomerization process is quite complex and is anticipated to be slower than the dimerization step. These results are important, as they lay the basis for the subsequent use of this technique for the possible fabrication of electronic device components or as sensitive assays to probe the surface structure of nanomaterials.

Bioassisted multi-nanoparticle patterning using single-layer peptide templates

Patterning of nanoparticles on solid substrates is one of the main challenges of current nanotechnology applications. The use of organic molecules as templates for the deposition of the nanoparticles makes it possible to utilize simple soft lithography techniques for patterning. Peptides appear to be powerful candidates for this job due to their versatility and design flexibility. In this work, we demonstrate the use of dual-affinity peptides, which bind both to the substrate and to the deposited nanoparticles, as single-layer linkers for the creation of multi-component nanoparticle patterns via microcontact printing processes. Controlled deposition and patterning of gold colloids or carbon nanotubes (CNTs) on silicon oxide surfaces and that of silicon oxide nanoparticles on gold surfaces have been achieved by the use of the corresponding dual-affinity peptides. Furthermore, patterning of both gold colloids and CNTs on a single substrate on predefined locations has been achieved. The suggested generic approach offers great flexibility by allowing binding of any material to a substrate of choice, provided that a peptide binding segment has been engineered for each of the inorganic components. Furthermore, the diversity of possible peptide sequences allows the formation of multi-component patterns, paving the way to fabricating complex functional structures based on peptide templates.

Genetically designed Peptide-based molecular materials

With recent developments of nanoscale engineering in the physical and chemical sciences and advances in molecular biology, molecular biomimetics is combining genetic tools and evolutionary approaches with synthetic nanoscale constructs to create a new hybrid methodology: genetically designed peptide-based molecular materials. Following the fundamental principles of genome-based design, molecular recognition, and self-assembly in nature, we can now use recombinant DNA technologies to design single or multifunctional peptides and peptide-based molecular constructs that can interact with solids and synthetic systems. These solid-binding peptides have made significant impact as inorganic synthesizers, nanoparticle linkers, and molecular assemblers, or simply as molecular building blocks, in a wide range of fields from chemistry to materials science to medicine. As part of the programmatic theme, "Nanoscience: Challenges for the Future", the current developments, challenges, and future prospects of the field were presented during a symposium at the 237th ACS National Meeting held in March 2009. This Nano Focus article presents a synopsis of the work discussed there.

The collective behavior of nanoscale building blocks

Nanotechnology has reached the stage of development where the subject of most investigations is not individual nanoparticles or nanowires but rather systems of much greater complexity.