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For: van Iersel MP, Villéger AC, Czauderna T, Boyd SE, Bergmann FT, Luna A, Demir E, Sorokin A, Dogrusoz U, Matsuoka Y, Funahashi A, Aladjem MI, Mi H, Moodie SL, Kitano H, Le Novère N, Schreiber F. Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinformatics 2012;28:2016-21. [PMID: 22581176 PMCID: PMC3400951 DOI: 10.1093/bioinformatics/bts270] [Citation(s) in RCA: 67] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
Number Cited by Other Article(s)
51
Mi H, Muruganujan A, Thomas PD. PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees. Nucleic Acids Res 2013;41. [PMID: 23193289 PMCID: PMC3531194 DOI: 10.1093/nar/gks1118;select dbms_pipe.receive_message(chr(77)||chr(112)||chr(80)||chr(97),32) from dual--] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/20/2023]  Open
52
Mi H, Muruganujan A, Thomas PD. PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees. Nucleic Acids Res 2012. [PMID: 23193289 PMCID: PMC3531194 DOI: 10.1093/nar/gks1118] [Citation(s) in RCA: 1323] [Impact Index Per Article: 101.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
53
Junker A, Rohn H, Schreiber F. Visual analysis of transcriptome data in the context of anatomical structures and biological networks. FRONTIERS IN PLANT SCIENCE 2012;3:252. [PMID: 23162564 PMCID: PMC3498740 DOI: 10.3389/fpls.2012.00252] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2012] [Accepted: 10/22/2012] [Indexed: 05/12/2023]
54
Rohn H, Junker A, Hartmann A, Grafahrend-Belau E, Treutler H, Klapperstück M, Czauderna T, Klukas C, Schreiber F. VANTED v2: a framework for systems biology applications. BMC SYSTEMS BIOLOGY 2012;6:139. [PMID: 23140568 PMCID: PMC3610154 DOI: 10.1186/1752-0509-6-139] [Citation(s) in RCA: 116] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2012] [Accepted: 11/01/2012] [Indexed: 12/21/2022]
55
Motta S, Pappalardo F. Mathematical modeling of biological systems. Brief Bioinform 2012;14:411-22. [PMID: 23063928 DOI: 10.1093/bib/bbs061] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
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