101
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Adam SM, Wijeratne GB, Rogler PJ, Diaz DE, Quist DA, Liu JJ, Karlin KD. Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function. Chem Rev 2018; 118:10840-11022. [PMID: 30372042 PMCID: PMC6360144 DOI: 10.1021/acs.chemrev.8b00074] [Citation(s) in RCA: 164] [Impact Index Per Article: 23.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Heme-copper oxidases (HCOs) are terminal enzymes on the mitochondrial or bacterial respiratory electron transport chain, which utilize a unique heterobinuclear active site to catalyze the 4H+/4e- reduction of dioxygen to water. This process involves a proton-coupled electron transfer (PCET) from a tyrosine (phenolic) residue and additional redox events coupled to transmembrane proton pumping and ATP synthesis. Given that HCOs are large, complex, membrane-bound enzymes, bioinspired synthetic model chemistry is a promising approach to better understand heme-Cu-mediated dioxygen reduction, including the details of proton and electron movements. This review encompasses important aspects of heme-O2 and copper-O2 (bio)chemistries as they relate to the design and interpretation of small molecule model systems and provides perspectives from fundamental coordination chemistry, which can be applied to the understanding of HCO activity. We focus on recent advancements from studies of heme-Cu models, evaluating experimental and computational results, which highlight important fundamental structure-function relationships. Finally, we provide an outlook for future potential contributions from synthetic inorganic chemistry and discuss their implications with relevance to biological O2-reduction.
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Affiliation(s)
- Suzanne M. Adam
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Gayan B. Wijeratne
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Patrick J. Rogler
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Daniel E. Diaz
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - David A. Quist
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Jeffrey J. Liu
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Kenneth D. Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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102
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Yin L, Yuan H, Liu C, He B, Gao SQ, Wen GB, Tan X, Lin YW. A Rationally Designed Myoglobin Exhibits a Catalytic Dehalogenation Efficiency More than 1000-Fold That of a Native Dehaloperoxidase. ACS Catal 2018. [DOI: 10.1021/acscatal.8b02979] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Lu−Lu Yin
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Hong Yuan
- Department of Chemistry and Institute of Biomedical Science, Fudan University, Shanghai 200433, China
| | - Can Liu
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Bo He
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
| | - Shu-Qin Gao
- Laboratory of Protein Structure and Function, University of South China, Hengyang 421001, China
| | - Ge-Bo Wen
- Laboratory of Protein Structure and Function, University of South China, Hengyang 421001, China
| | - Xiangshi Tan
- Department of Chemistry and Institute of Biomedical Science, Fudan University, Shanghai 200433, China
| | - Ying-Wu Lin
- School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China
- Laboratory of Protein Structure and Function, University of South China, Hengyang 421001, China
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103
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Saracini C, Malik DD, Sankaralingam M, Lee YM, Nam W, Fukuzumi S. Enhanced Electron-Transfer Reactivity of a Long-Lived Photoexcited State of a Cobalt-Oxygen Complex. Inorg Chem 2018; 57:10945-10952. [PMID: 30133298 DOI: 10.1021/acs.inorgchem.8b01571] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Photodynamics and electron-transfer reactivity of an excited state derived from an earth-abundant mononuclear cobalt-oxygen complex ground state, [(TAML)CoIV(O)]2- (1; H4TAML = 3,4,8,9-tetrahydro-3,3,6,6,9,9-hexamethyl-1 H-1,4,8,11-benzotetraazo-cyclotridecane-2,5,7,10-(6 H, 11 H)tetrone), prepared by electron-transfer oxidation of Li[(TAML)CoIII]·3(H2O) (2) in a 1:1 acetonitrile/acetone solvent mixture at 5 °C, were investigated using a combination of femtosecond and nanosecond laser absorption spectroscopy. Visible light photoexcitation of 1 (λexc = 393 nm) resulted in generation of the excited state S2* (lifetime: 1.4(4) ps), detected 2 ps after laser irradiation by femtosecond laser spectroscopy. The initially formed excited state S2* converted to a lower-lying excited state, S1* (λmax = 580 nm), with rate constant kc = 7(2) × 1011 s-1 (S2* → S1*). S1* exhibited a 0.6(1) ns lifetime and converted to the initial ground state 1 with rate constant kd = 1.7(3) × 109 s-1 (S1* → 1). The same excited state dynamics was observed when 1 was generated by electron-transfer oxidation of 2 using different one-electron oxidants such as Cu(OTf)2 (OTf- = triflate anion), [Fe(bpy)3]3+ (bpy = 2,2'-bipyridine), and tris(4-bromophenyl)ammoniumyl radical cation (TBPA•+). The electron-transfer reactivity of S1* was probed by nanosecond laser photoexcitation of 1 in the presence of a series of electron donors with different one-electron oxidation potentials ( Eox vs SCE): benzene (2.35 V), toluene (2.20 V), m-xylene (2.02 V), and anisole (1.67 V). The excited state S1* engaged in electron-transfer reactions with m-xylene and anisole to generate π-dimer radical cations of m-xylene and anisole, respectively, observed by nanosecond laser transient absorption spectroscopy, whereas no reactivity was observed toward benzene and toluene. Such differential electron-transfer reactivity depending on the Eox values of electron donors allowed the estimation of the one-electron reduction potential of S1* ( Ered*) as 2.1(1) V vs SCE, which is much higher than that of the ground state ( Ered = 0.86 V vs SCE).
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Affiliation(s)
- Claudio Saracini
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Deesha D Malik
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | | | - Yong-Min Lee
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea.,Faculty of Science and Engineering, Meijo University, SENTAN, Japan Science and Technology Agency (JST) , Nagoya , Aichi 468-8502 , Japan
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104
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Cheng J, Wang L, Wang P, Deng L. High-Oxidation-State 3d Metal (Ti-Cu) Complexes with N-Heterocyclic Carbene Ligation. Chem Rev 2018; 118:9930-9987. [PMID: 30011189 DOI: 10.1021/acs.chemrev.8b00096] [Citation(s) in RCA: 116] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
High-oxidation-state 3d metal species have found a wide range of applications in modern synthetic chemistry and materials science. They are also implicated as key reactive species in biological reactions. These applications have thus prompted explorations of their formation, structure, and properties. While the traditional wisdom regarding these species was gained mainly from complexes supported by nitrogen- and oxygen-donor ligands, recent studies with N-heterocyclic carbenes (NHCs), which are widely used for the preparation of low-oxidation-state transition metal complexes in organometallic chemistry, have led to the preparation of a large variety of isolable high-oxidation-state 3d metal complexes with NHC ligation. Since the first report in this area in the 1990s, isolable complexes of this type have been reported for titanium(IV), vanadium(IV,V), chromium(IV,V), manganese(IV,V), iron(III,IV,V), cobalt(III,IV,V), nickel(IV), and copper(II). With the aim of providing an overview of this intriguing field, this Review summarizes our current understanding of the synthetic methods, structure and spectroscopic features, reactivity, and catalytic applications of high-oxidation-state 3d metal NHC complexes of titanium to copper. In addition to this progress, factors affecting the stability and reactivity of high-oxidation-state 3d metal NHC species are also presented, as well as perspectives on future efforts.
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Affiliation(s)
- Jun Cheng
- State Key Laboratory of Organometallic Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences, Chinese Academy of Sciences , 345 Lingling Road , Shanghai 200032 , People's Republic of China
| | - Lijun Wang
- State Key Laboratory of Organometallic Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences, Chinese Academy of Sciences , 345 Lingling Road , Shanghai 200032 , People's Republic of China
| | - Peng Wang
- State Key Laboratory of Organometallic Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences, Chinese Academy of Sciences , 345 Lingling Road , Shanghai 200032 , People's Republic of China
| | - Liang Deng
- State Key Laboratory of Organometallic Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences, Chinese Academy of Sciences , 345 Lingling Road , Shanghai 200032 , People's Republic of China
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105
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Calvete MJF, Piñeiro M, Dias LD, Pereira MM. Hydrogen Peroxide and Metalloporphyrins in Oxidation Catalysis: Old Dogs with Some New Tricks. ChemCatChem 2018. [DOI: 10.1002/cctc.201800587] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Mário J. F. Calvete
- Centro de Química de Coimbra (CQC); Department of Chemistry; University of Coimbra; Rua Larga 3004-535 Coimbra Portugal
| | - Marta Piñeiro
- Centro de Química de Coimbra (CQC); Department of Chemistry; University of Coimbra; Rua Larga 3004-535 Coimbra Portugal
| | - Lucas D. Dias
- Centro de Química de Coimbra (CQC); Department of Chemistry; University of Coimbra; Rua Larga 3004-535 Coimbra Portugal
| | - Mariette M. Pereira
- Centro de Química de Coimbra (CQC); Department of Chemistry; University of Coimbra; Rua Larga 3004-535 Coimbra Portugal
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106
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Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form. Proc Natl Acad Sci U S A 2018. [PMID: 29531094 PMCID: PMC5879690 DOI: 10.1073/pnas.1719190115] [Citation(s) in RCA: 145] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
Indoleamine 2,3-dioxygenase (IDO1) is a heme protein that catalyzes the dioxygenation of tryptophan. Cells expressing this activity are able to profoundly alter their surrounding environment to suppress the immune response. Cancer cells exploit this pathway to avoid immune-mediated destruction. Through a range of kinetic, structural, and cellular assays, we show that two classes of highly selective inhibitors of IDO1 act by competing with heme binding to apo-IDO1. This shows that IDO1 is dynamically bound to its heme cofactor in what is likely a critical step in the regulation of this enzyme. These results have elucidated a previously undiscovered role for the ubiquitous heme cofactor in immune regulation, and it suggests that other heme proteins in biology may be similarly regulated. For cancer cells to survive and proliferate, they must escape normal immune destruction. One mechanism by which this is accomplished is through immune suppression effected by up-regulation of indoleamine 2,3-dioxygenase (IDO1), a heme enzyme that catalyzes the oxidation of tryptophan to N-formylkynurenine. On deformylation, kynurenine and downstream metabolites suppress T cell function. The importance of this immunosuppressive mechanism has spurred intense interest in the development of clinical IDO1 inhibitors. Herein, we describe the mechanism by which a class of compounds effectively and specifically inhibits IDO1 by targeting its apo-form. We show that the in vitro kinetics of inhibition coincide with an unusually high rate of intrinsic enzyme–heme dissociation, especially in the ferric form. X-ray crystal structures of the inhibitor–enzyme complexes show that heme is displaced from the enzyme and blocked from rebinding by these compounds. The results reveal that apo-IDO1 serves as a unique target for inhibition and that heme lability plays an important role in posttranslational regulation.
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107
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Shul'pin GB, Vinogradov MM, Shul'pina LS. Oxidative functionalization of C–H compounds induced by the extremely efficient osmium catalysts (a review). Catal Sci Technol 2018. [DOI: 10.1039/c8cy00659h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In recent years, osmium complexes have found applications not only in thecis-hydroxylation of olefins but also very efficient in the oxygenation of C–H compounds (saturated and aromatic hydrocarbons and alcohols) by hydrogen peroxide as well as organic peroxides.
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Affiliation(s)
- Georgiy B. Shul'pin
- Semenov Institute of Chemical Physics
- Russian Academy of Sciences
- Moscow
- Russia
- Plekhanov Russian University of Economics
| | - Mikhail M. Vinogradov
- Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
| | - Lidia S. Shul'pina
- Nesmeyanov Institute of Organoelement Compounds
- Russian Academy of Sciences
- Moscow
- Russia
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108
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Yin LL, Yuan H, Du KJ, He B, Gao SQ, Wen GB, Tan X, Lin YW. Regulation of both the structure and function by a de novo designed disulfide bond: a case study of heme proteins in myoglobin. Chem Commun (Camb) 2018; 54:4356-4359. [DOI: 10.1039/c8cc01646a] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The V21C/V66C/F46S myoglobin mutant, with a de novo designed intramolecular disulfide bond resembling that in cytoglobin without structural evidence, exhibits a dehalogenation activity exceeding that of a native dehaloperoxidase.
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Affiliation(s)
- Lu-Lu Yin
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Hong Yuan
- Department of Chemistry & Institute of Biomedical Science
- Fudan University
- Shanghai 200433
- China
| | - Ke-Jie Du
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Bo He
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Shu-Qin Gao
- Laboratory of Protein Structure and Function
- University of South China
- Hengyang 421001
- China
| | - Ge-Bo Wen
- Laboratory of Protein Structure and Function
- University of South China
- Hengyang 421001
- China
| | - Xiangshi Tan
- Department of Chemistry & Institute of Biomedical Science
- Fudan University
- Shanghai 200433
- China
| | - Ying-Wu Lin
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
- Laboratory of Protein Structure and Function
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