101
|
Bressloff PC. Asymptotic analysis of extended two-dimensional narrow capture problems. Proc Math Phys Eng Sci 2021. [DOI: 10.1098/rspa.2020.0771] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
In this paper, we extend our recent work on two-dimensional diffusive search-and-capture processes with multiple small targets (narrow capture problems) by considering an asymptotic expansion of the Laplace transformed probability flux into each target. The latter determines the distribution of arrival or capture times into an individual target, conditioned on the set of events that result in capture by that target. A characteristic feature of strongly localized perturbations in two dimensions is that matched asymptotics generates a series expansion in
ν
= −1/ln
ϵ
rather than
ϵ
, 0 <
ϵ
≪ 1, where
ϵ
specifies the size of each target relative to the size of the search domain. Moreover, it is possible to sum over all logarithmic terms non-perturbatively. We exploit this fact to show how a Taylor expansion in the Laplace variable
s
for fixed
ν
provides an efficient method for obtaining corresponding asymptotic expansions of the splitting probabilities and moments of the conditional first-passage-time densities. We then use our asymptotic analysis to derive new results for two major extensions of the classical narrow capture problem: optimal search strategies under stochastic resetting and the accumulation of target resources under multiple rounds of search-and-capture.
Collapse
Affiliation(s)
- P. C. Bressloff
- Department of Mathematics, University of Utah, 155 South 1400 East, Salt Lake City, UT 84112, USA
| |
Collapse
|
102
|
Majumdar SN, Mori F, Schawe H, Schehr G. Mean perimeter and area of the convex hull of a planar Brownian motion in the presence of resetting. Phys Rev E 2021; 103:022135. [PMID: 33736082 DOI: 10.1103/physreve.103.022135] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 01/28/2021] [Indexed: 06/12/2023]
Abstract
We compute exactly the mean perimeter and the mean area of the convex hull of a two-dimensional isotropic Brownian motion of duration t and diffusion constant D, in the presence of resetting to the origin at a constant rate r. We show that for any t, the mean perimeter is given by 〈L(t)〉=2πsqrt[D/r]f_{1}(rt) and the mean area is given by 〈A(t)〉=2πD/rf_{2}(rt) where the scaling functions f_{1}(z) and f_{2}(z) are computed explicitly. For large t≫1/r, the mean perimeter grows extremely slowly as 〈L(t)〉∝ln(rt) with time. Likewise, the mean area also grows slowly as 〈A(t)〉∝ln^{2}(rt) for t≫1/r. Our exact results indicate that the convex hull, in the presence of resetting, approaches a circular shape at late times due to the isotropy of the Brownian motion. Numerical simulations are in perfect agreement with our analytical predictions.
Collapse
Affiliation(s)
- Satya N Majumdar
- LPTMS, CNRS, Université Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Francesco Mori
- LPTMS, CNRS, Université Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Hendrik Schawe
- Laboratoire de Physique Théorique et Modélisation, UMR-8089 CNRS, CY Cergy Paris Université, 95510 Cergy, France
| | - Grégory Schehr
- LPTMS, CNRS, Université Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| |
Collapse
|
103
|
Ray A, Pal A, Ghosh D, Dana SK, Hens C. Mitigating long transient time in deterministic systems by resetting. CHAOS (WOODBURY, N.Y.) 2021; 31:011103. [PMID: 33754784 DOI: 10.1063/5.0038374] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Accepted: 12/24/2020] [Indexed: 06/12/2023]
Abstract
How long does a trajectory take to reach a stable equilibrium point in the basin of attraction of a dynamical system? This is a question of quite general interest and has stimulated a lot of activities in dynamical and stochastic systems where the metric of this estimation is often known as the transient or first passage time. In nonlinear systems, one often experiences long transients due to their underlying dynamics. We apply resetting or restart, an emerging concept in statistical physics and stochastic process, to mitigate the detrimental effects of prolonged transients in deterministic dynamical systems. We show that resetting the intrinsic dynamics intermittently to a spatial control line that passes through the equilibrium point can dramatically expedite its completion, resulting in a huge reduction in mean transient time and fluctuations around it. Moreover, our study reveals the emergence of an optimal restart time that globally minimizes the mean transient time. We corroborate the results with detailed numerical studies on two canonical setups in deterministic dynamical systems, namely, the Stuart-Landau oscillator and the Lorenz system. The key features-expedition of transient time-are found to be very generic under different resetting strategies. Our analysis opens up a door to control the mean and fluctuations in transient time by unifying the original dynamics with an external stochastic or periodic timer and poses open questions on the optimal way to harness transients in dynamical systems.
Collapse
Affiliation(s)
- Arnob Ray
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Arnab Pal
- School of Chemistry, Faculty of Exact Sciences and The Center for Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Dibakar Ghosh
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Syamal K Dana
- Centre for Mathematical Biology and Ecology, Department of Mathematics, Jadavpur University, Kolkata 700032, India
| | - Chittaranjan Hens
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| |
Collapse
|
104
|
Ray S. Space-dependent diffusion with stochastic resetting: A first-passage study. J Chem Phys 2020; 153:234904. [DOI: 10.1063/5.0034432] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Somrita Ray
- School of Chemistry, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, The Center for Physics and Chemistry of Living Systems, and The Ratner Center for Single Molecule Science, Tel Aviv University, Tel Aviv 69978, Israel
| |
Collapse
|
105
|
Plata CA, Gupta D, Azaele S. Asymmetric stochastic resetting: Modeling catastrophic events. Phys Rev E 2020; 102:052116. [PMID: 33327183 DOI: 10.1103/physreve.102.052116] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Accepted: 10/22/2020] [Indexed: 06/12/2023]
Abstract
In the classical stochastic resetting problem, a particle, moving according to some stochastic dynamics, undergoes random interruptions that bring it to a selected domain, and then the process recommences. Hitherto, the resetting mechanism has been introduced as a symmetric reset about the preferred location. However, in nature, there are several instances where a system can only reset from certain directions, e.g., catastrophic events. Motivated by this, we consider a continuous stochastic process on the positive real line. The process is interrupted at random times occurring at a constant rate, and then the former relocates to a value only if the current one exceeds a threshold; otherwise, it follows the trajectory defined by the underlying process without resetting. An approach to obtain the exact nonequilibrium steady state of such systems and the mean first passage time to reach the origin is presented. Furthermore, we obtain the explicit solutions for two different model systems. Some of the classical results found in symmetric resetting, such as the existence of an optimal resetting, are strongly modified. Finally, numerical simulations have been performed to verify the analytical findings, showing an excellent agreement.
Collapse
Affiliation(s)
- Carlos A Plata
- Dipartimento di Fisica "G. Galilei," INFN, Università di Padova, Via Marzolo 8, 35131 Padova, Italy
| | - Deepak Gupta
- Dipartimento di Fisica "G. Galilei," INFN, Università di Padova, Via Marzolo 8, 35131 Padova, Italy
| | - Sandro Azaele
- Dipartimento di Fisica "G. Galilei," INFN, Università di Padova, Via Marzolo 8, 35131 Padova, Italy
| |
Collapse
|
106
|
Kumar V, Sadekar O, Basu U. Active Brownian motion in two dimensions under stochastic resetting. Phys Rev E 2020; 102:052129. [PMID: 33327209 DOI: 10.1103/physreve.102.052129] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 10/30/2020] [Indexed: 06/12/2023]
Abstract
We study the position distribution of an active Brownian particle (ABP) in the presence of stochastic resetting in two spatial dimensions. We consider three different resetting protocols: (1) where both position and orientation of the particle are reset, (2) where only the position is reset, and (3) where only the orientation is reset with a certain rate r. We show that in the first two cases, the ABP reaches a stationary state. Using a renewal approach, we calculate exactly the stationary marginal position distributions in the limiting cases when the resetting rate r is much larger or much smaller than the rotational diffusion constant D_{R} of the ABP. We find that, in some cases, for a large resetting rate, the position distribution diverges near the resetting point; the nature of the divergence depends on the specific protocol. For the orientation resetting, there is no stationary state, but the motion changes from a ballistic one at short times to a diffusive one at late times. We characterize the short-time non-Gaussian marginal position distributions using a perturbative approach.
Collapse
Affiliation(s)
- Vijay Kumar
- Centre for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, Nobelya Ulitsa 3, Moscow, 121205, Russia
| | - Onkar Sadekar
- Indian Institute of Science Education and Research, Homi Bhabha Road, Pashan, Pune 411008, India
| | - Urna Basu
- Raman Research Institute, C. V. Raman Avenue, Bengaluru 560080, India
| |
Collapse
|
107
|
Belousov R, Qaisrani MN, Hassanali A, Roldán É. First-passage fingerprints of water diffusion near glutamine surfaces. SOFT MATTER 2020; 16:9202-9216. [PMID: 32510065 DOI: 10.1039/d0sm00541j] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The extent to which biological interfaces affect the dynamics of water plays a key role in the exchange of matter and chemical interactions that are essential for life. The density and the mobility of water molecules depend on their proximity to biological interfaces and can play an important role in processes such as protein folding and aggregation. In this work, we study the dynamics of water near glutamine surfaces-a system of interest in studies of neurodegenerative diseases. Combining molecular-dynamics simulations and stochastic modelling, we study how the mean first-passage time and related statistics of water molecules escaping subnanometer-sized regions vary from the interface to the bulk. Our analysis reveals a dynamical complexity that reflects underlying chemical and geometrical properties of the glutamine surfaces. From the first-passage time statistics of water molecules, we infer their space-dependent diffusion coefficient in directions normal to the surfaces. Interestingly, our results suggest that the mobility of water varies over a longer length scale than the chemical potential associated with the water-protein interactions. The synergy of molecular dynamics and first-passage techniques opens the possibility for extracting space-dependent diffusion coefficients in more complex, inhomogeneous environments that are commonplace in living matter.
Collapse
Affiliation(s)
- Roman Belousov
- ICTP - The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151, Trieste, Italy.
| | - Muhammad Nawaz Qaisrani
- ICTP - The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151, Trieste, Italy. and SISSA - International School for Advanced Studies, Via Bonomea 265, 34136 Trieste, Italy
| | - Ali Hassanali
- ICTP - The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151, Trieste, Italy.
| | - Édgar Roldán
- ICTP - The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151, Trieste, Italy.
| |
Collapse
|
108
|
Bressloff PC. Target competition for resources under multiple search-and-capture events with stochastic resetting. Proc Math Phys Eng Sci 2020; 476:20200475. [PMID: 33223946 PMCID: PMC7655747 DOI: 10.1098/rspa.2020.0475] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Accepted: 09/15/2020] [Indexed: 12/19/2022] Open
Abstract
We develop a general framework for analysing the distribution of resources in a population of targets under multiple independent search-and-capture events. Each event involves a single particle executing a stochastic search that resets to a fixed location x r at a random sequence of times. Whenever the particle is captured by a target, it delivers a packet of resources and then returns to x r , where it is reloaded with cargo and a new round of search and capture begins. Using renewal theory, we determine the mean number of resources in each target as a function of the splitting probabilities and unconditional mean first passage times of the corresponding search process without resetting. We then use asymptotic PDE methods to determine the effects of resetting on the distribution of resources generated by diffusive search in a bounded two-dimensional domain with N small interior targets. We show that slow resetting increases the total number of resources M tot across all targets provided that ∑ j = 1 N G ( x r , x j ) < 0 , where G is the Neumann Green's function and x j is the location of the j-th target. This implies that M tot can be optimized by varying r. We also show that the k-th target has a competitive advantage if ∑ j = 1 N G ( x r , x j ) > N G ( x r , x k ) .
Collapse
Affiliation(s)
- P. C. Bressloff
- Department of Mathematics, University of Utah, 155 South 1400 East, Salt Lake City, UT 84112, USA
| |
Collapse
|
109
|
Bressloff PC. Search processes with stochastic resetting and multiple targets. Phys Rev E 2020; 102:022115. [PMID: 32942430 DOI: 10.1103/physreve.102.022115] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 07/22/2020] [Indexed: 11/07/2022]
Abstract
Search processes with stochastic resetting provide a general theoretical framework for understanding a wide range of naturally occurring phenomena. Most current models focus on the first-passage-time problem of finding a single target in a given search domain. Here we use a renewal method to derive general expressions for the splitting probabilities and conditional mean first passage times (MFPTs) in the case of multiple targets. Our analysis also incorporates the effects of delays arising from finite return times and refractory periods. Carrying out a small-r expansion, where r is the mean resetting rate, we obtain general conditions for when resetting increases the splitting probability or reduces the conditional MFPT to a particular target. This also depends on whether π_{tot}=1 or π_{tot}<1, where π_{tot} is the probability that the particle is eventually absorbed by one of the targets in the absence of resetting. We illustrate the theory by considering two distinct examples. The first consists of an actin-rich cell filament (cytoneme) searching along a one-dimensional array of target cells, a problem for which the splitting probabilities and MFPTs can be calculated explicitly. In particular, we highlight how the resetting rate plays an important role in shaping the distribution of splitting probabilities along the array. The second example involves a search process in a three-dimensional bounded domain containing a set of N small interior targets. We use matched asymptotics and Green's functions to determine the behavior of the splitting probabilities and MFPTs in the small-r regime. In particular, we show that the splitting probabilities and MFPTs depend on the "shape capacitance" of the targets.
Collapse
Affiliation(s)
- Paul C Bressloff
- Department of Mathematics, University of Utah, 155 South 1400 East, Salt Lake City, Utah 84112, USA
| |
Collapse
|
110
|
Tal-Friedman O, Pal A, Sekhon A, Reuveni S, Roichman Y. Experimental Realization of Diffusion with Stochastic Resetting. J Phys Chem Lett 2020; 11:7350-7355. [PMID: 32787296 PMCID: PMC7586404 DOI: 10.1021/acs.jpclett.0c02122] [Citation(s) in RCA: 72] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Stochastic resetting is prevalent in natural and man-made systems, giving rise to a long series of nonequilibrium phenomena. Diffusion with stochastic resetting serves as a paradigmatic model to study these phenomena, but the lack of a well-controlled platform by which this process can be studied experimentally has been a major impediment to research in the field. Here, we report the experimental realization of colloidal particle diffusion and resetting via holographic optical tweezers. We provide the first experimental corroboration of central theoretical results and go on to measure the energetic cost of resetting in steady-state and first-passage scenarios. In both cases, we show that this cost cannot be made arbitrarily small because of fundamental constraints on realistic resetting protocols. The methods developed herein open the door to future experimental study of resetting phenomena beyond diffusion.
Collapse
Affiliation(s)
- Ofir Tal-Friedman
- School
of Physics & Astronomy, Raymond and Beverly Sackler Faculty of
Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Arnab Pal
- School
of Chemistry, The Center for Physics and Chemistry of Living Systems,
& The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Amandeep Sekhon
- School
of Chemistry, The Center for Physics and Chemistry of Living Systems,
& The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Shlomi Reuveni
- School
of Chemistry, The Center for Physics and Chemistry of Living Systems,
& The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Yael Roichman
- School
of Physics & Astronomy, Raymond and Beverly Sackler Faculty of
Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- School
of Chemistry, The Center for Physics and Chemistry of Living Systems,
& The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| |
Collapse
|
111
|
Bressloff PC. Queueing theory of search processes with stochastic resetting. Phys Rev E 2020; 102:032109. [PMID: 33075909 DOI: 10.1103/physreve.102.032109] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Accepted: 08/21/2020] [Indexed: 06/11/2023]
Abstract
We use queueing theory to develop a general framework for analyzing search processes with stochastic resetting, under the additional assumption that following absorption by a target, the particle (searcher) delivers a packet of resources to the target and the search process restarts at the reset point x_{r}. This leads to a sequence of search-and-capture events, whereby resources accumulate in the target under the combined effects of resource supply and degradation. Combining the theory of G/M/∞ queues with a renewal method for analyzing resetting processes, we derive general expressions for the mean and variance of the number of resource packets within the target at steady state. These expressions apply to both exponential and nonexponential resetting protocols and take into account delays arising from various factors such as finite return times, refractory periods, and delays due to the loading or unloading of resources. In the case of exponential resetting, we show how the resource statistics can be expressed in terms of the MFPTs T_{r}(x_{r}) and T_{r+γ}(x_{r}), where r is the resetting rate and γ is the degradation rate. This allows us to derive various general results concerning the dependence of the mean and variance on the parameters r,γ. Our results are illustrated using several specific examples. Finally, we show how fluctuations can be reduced either by allowing the delivery of multiple packets that degrade independently or by having multiple independent searchers.
Collapse
Affiliation(s)
- Paul C Bressloff
- Department of Mathematics, University of Utah, Salt Lake City, Utah 84112, USA
| |
Collapse
|
112
|
Ahmad S, Das D. Role of dimensions in first passage of a diffusing particle under stochastic resetting and attractive bias. Phys Rev E 2020; 102:032145. [PMID: 33075998 DOI: 10.1103/physreve.102.032145] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Accepted: 09/08/2020] [Indexed: 06/11/2023]
Abstract
Recent studies in one dimension have revealed that the temporal advantage rendered by stochastic resetting to diffusing particles in attaining first passage may be annulled by a sufficiently strong attractive potential. We extend the results to higher dimensions. For a diffusing particle in an attractive potential V(R)=kR^{n}, in general d dimensions, we study the critical strength k=k_{c} above which resetting becomes disadvantageous. The point of continuous transition may be exactly found even in cases where the problem with resetting is not solvable, provided the first two moments of the problem without resetting are known. We find the dimensionless critical strength κ_{c,n}(k_{c}) exactly when d/n and 2/n take positive integral values. Also for the limiting case of a box potential (representing n→∞), and the special case of a logarithmic potential kln(R/a), we find the corresponding transition points κ_{c,∞} and κ_{c,l} exactly for any dimension d. The asymptotic forms of the critical strengths at large dimensions d are interesting. We show that for the power law potential, for any n∈(0,∞), the dimensionless critical strength κ_{c,n}∼d^{1/n} at large d. For the box potential, asymptotically, κ_{c,∞}∼(1-ln(d/2)/d), while for the logarithmic potential, κ_{c,l}∼d.
Collapse
Affiliation(s)
- Saeed Ahmad
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Dibyendu Das
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| |
Collapse
|
113
|
Bodrova AS, Sokolov IM. Brownian motion under noninstantaneous resetting in higher dimensions. Phys Rev E 2020; 102:032129. [PMID: 33076031 DOI: 10.1103/physreve.102.032129] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2020] [Accepted: 07/31/2020] [Indexed: 06/11/2023]
Abstract
We consider Brownian motion under resetting in higher dimensions for the case when the return of the particle to the origin occurs at a constant speed. We investigate the behavior of the probability density function (PDF) and of the mean-squared displacement (MSD) in this process. We study two different resetting protocols: exponentially distributed time intervals between the resetting events (Poissonian resetting) and resetting at fixed time intervals (deterministic resetting). We moreover discuss a general problem of the invariance of the PDF with respect to the return speed, as observed in the one-dimensional system for Poissonian resetting, and show that this one-dimensional situation is the only one in which such an invariance can be found. However, the invariance of the MSD can still be observed in higher dimensions.
Collapse
Affiliation(s)
- Anna S Bodrova
- Department of Physics, Humboldt University, Newtonstrasse 15, 12489 Berlin, Germany
- Moscow Institute of Electronics and Mathematics, National Research University Higher School of Economics, 123458 Moscow, Russia
- Faculty of Physics, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Igor M Sokolov
- Department of Physics, Humboldt University, Newtonstrasse 15, 12489 Berlin, Germany
- IRIS Adlershof, Zum Großen Windkanal 6, 12489 Berlin, Germany
| |
Collapse
|
114
|
De Bruyne B, Randon-Furling J, Redner S. Optimization in First-Passage Resetting. PHYSICAL REVIEW LETTERS 2020; 125:050602. [PMID: 32794864 DOI: 10.1103/physrevlett.125.050602] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Accepted: 06/25/2020] [Indexed: 06/11/2023]
Abstract
We investigate classic diffusion with the added feature that a diffusing particle is reset to its starting point each time the particle reaches a specified threshold. In an infinite domain, this process is nonstationary and its probability distribution exhibits rich features. In a finite domain, we define a nontrivial optimization in which a cost is incurred whenever the particle is reset and a reward is obtained while the particle stays near the reset point. We derive the condition to optimize the net gain in this system, namely, the reward minus the cost.
Collapse
Affiliation(s)
- B De Bruyne
- Perimeter Institute, 31 Caroline Street North, Waterloo, Ontario, N2L 2Y5, Canada
- CentraleSupélec, Université Paris-Saclay, 3 rue Joliot-Curie, 91190 Gif-sur-Yvette, France
| | - J Randon-Furling
- SAMM, Université Paris 1 Panthéon Sorbonne-FP2M (FR2036) CNRS, 90 rue de Tolbiac, 75013 Paris, France
- Department of Mathematics, Columbia University, 2990 Broadway, New York, New York 10027, USA
| | - S Redner
- Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, New Mexico 87501, USA
| |
Collapse
|
115
|
Ray S, Reuveni S. Diffusion with resetting in a logarithmic potential. J Chem Phys 2020; 152:234110. [DOI: 10.1063/5.0010549] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Affiliation(s)
- Somrita Ray
- School of Chemistry, The Center for Physics and Chemistry of Living Systems, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, and The Ratner Center for Single Molecule Science, Tel Aviv University, Tel Aviv 69978, Israel
| | - Shlomi Reuveni
- School of Chemistry, The Center for Physics and Chemistry of Living Systems, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, and The Ratner Center for Single Molecule Science, Tel Aviv University, Tel Aviv 69978, Israel
| |
Collapse
|
116
|
Vidmar M. On laws exhibiting universal ordering under stochastic restart. COMMUN STAT-THEOR M 2020. [DOI: 10.1080/03610926.2020.1759640] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Matija Vidmar
- Department of Mathematics, University of Ljubljana and Institute of Mathematics, Physics and Mechanics, Slovenia
| |
Collapse
|
117
|
Bodrova AS, Sokolov IM. Continuous-time random walks under power-law resetting. Phys Rev E 2020; 101:062117. [PMID: 32688585 DOI: 10.1103/physreve.101.062117] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Accepted: 05/20/2020] [Indexed: 06/11/2023]
Abstract
We study continuous-time random walks (CTRW) with power-law distribution of waiting times under resetting which brings the walker back to the origin, with a power-law distribution of times between the resetting events. Two situations are considered. Under complete resetting, the CTRW after the resetting event starts anew, with a new waiting time, independent of the prehistory. Under incomplete resetting, the resetting of the coordinate does not influence the waiting time until the next jump. We focus on the behavior of the mean-squared displacement (MSD) of the walker from its initial position, on the conditions under which the probability density functions of the walker's displacement show universal behavior, and on this universal behavior itself. We show, that the behavior of the MSD is the same as in the scaled Brownian motion (SBM), being the mean-field model of the CTRW. The intermediate asymptotics of the probability density functions (PDF) for CTRW under complete resetting (provided they exist) are also the same as in the corresponding case for SBM. For incomplete resetting, however, the behavior of the PDF for CTRW and SBM is vastly different.
Collapse
Affiliation(s)
- Anna S Bodrova
- Department of Physics, Humboldt University, Newtonstrasse 15, D-12489 Berlin, Germany
| | - Igor M Sokolov
- Department of Physics, Humboldt University, Newtonstrasse 15, D-12489 Berlin, Germany
- IRIS Adlershof, Zum Großen Windkanal 6, D-12489 Berlin, Germany
| |
Collapse
|
118
|
Bodrova AS, Sokolov IM. Resetting processes with noninstantaneous return. Phys Rev E 2020; 101:052130. [PMID: 32575253 DOI: 10.1103/physreve.101.052130] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2019] [Accepted: 02/27/2020] [Indexed: 01/05/2023]
Abstract
We consider a random two-phase process which we call a reset-return one. The particle starts its motion at the origin. The first, displacement, phase corresponds to a stochastic motion of a particle and is finished at a resetting event. The second, return, phase corresponds to the particle's motion toward the origin from the position it attained at the end of the displacement phase. This motion toward the origin takes place according to a given equation of motion. The whole process is a renewal one. We provide general expressions for the stationary probability density function of the particle's position and for the mean hitting time in one dimension. We perform explicit analysis for the Brownian motion during the displacement phase and three different types of the return motion: return at a constant speed, return at a constant acceleration with zero initial speed, and return under the action of a harmonic force. We assume that the waiting times for resetting events follow an exponential distribution or that resetting takes place after a fixed waiting period. For the first two types of return motion and the exponential resetting, the stationary probability density function of the particle's position is invariant under return speed (acceleration), while no such invariance is found for deterministic resetting, and for exponential resetting with return under the action of the harmonic force. We discuss necessary conditions for such invariance of the stationary PDF of the positions with respect to the properties of the return process, and we demonstrate some additional examples when this invariance does or does not take place.
Collapse
Affiliation(s)
- Anna S Bodrova
- Humboldt University, Department of Physics, Newtonstrasse 15, 12489 Berlin, Germany.,Moscow Institute of Electronics and Mathematics, National Research University Higher School of Economics, 123458, Moscow, Russia.,Faculty of Physics, M.V.Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Igor M Sokolov
- Humboldt University, Department of Physics, Newtonstrasse 15, 12489 Berlin, Germany.,IRIS Adlershof, Zum Großen Windkanal 6, 12489 Berlin, Germany
| |
Collapse
|
119
|
Gupta D, Plata CA, Pal A. Work Fluctuations and Jarzynski Equality in Stochastic Resetting. PHYSICAL REVIEW LETTERS 2020; 124:110608. [PMID: 32242734 DOI: 10.1103/physrevlett.124.110608] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Accepted: 03/03/2020] [Indexed: 05/27/2023]
Abstract
We consider the paradigm of an overdamped Brownian particle in a potential well, which is modulated through an external protocol, in the presence of stochastic resetting. Thus, in addition to the short range diffusive motion, the particle also experiences intermittent long jumps that reset the particle back at a preferred location. Due to the modulation of the trap, work is done on the system and we investigate the statistical properties of the work fluctuations. We find that the distribution function of the work typically, in asymptotic times, converges to a universal Gaussian form for any protocol as long as that is also renewed after each resetting event. When observed for a finite time, we show that the system does not generically obey the Jarzynski equality that connects the finite time work fluctuations to the difference in free energy. Nonetheless, we identify herein a restricted set of protocols which embraces the relation. In stark contrast, the Jarzynski equality is always fulfilled when the protocols continue to evolve without being reset. We present a set of exactly solvable models, demonstrate the validation of our theory and carry out numerical simulations to illustrate these findings. Finally, we have pointed out possible realistic implementations for resetting in experiments using the so-called engineered swift equilibration.
Collapse
Affiliation(s)
- Deepak Gupta
- Dipartimento di Fisica "G. Galilei," INFN, Università di Padova, Via Marzolo 8, 35131 Padova, Italy
| | - Carlos A Plata
- Dipartimento di Fisica "G. Galilei," INFN, Università di Padova, Via Marzolo 8, 35131 Padova, Italy
| | - Arnab Pal
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- Center for the Physics and Chemistry of Living Systems. Tel Aviv University, 6997801, Tel Aviv, Israel
- The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| |
Collapse
|
120
|
Pal A, Kuśmierz Ł, Reuveni S. Time-dependent density of diffusion with stochastic resetting is invariant to return speed. Phys Rev E 2019; 100:040101. [PMID: 31770943 DOI: 10.1103/physreve.100.040101] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Indexed: 01/07/2023]
Abstract
The canonical Evans-Majumdar model for diffusion with stochastic resetting to the origin assumes that resetting takes zero time: upon resetting the diffusing particle is teleported back to the origin to start its motion anew. However, in reality getting from one place to another takes a finite amount of time which must be accounted for as diffusion with resetting already serves as a model for a myriad of processes in physics and beyond. Here we consider a situation where upon resetting the diffusing particle returns to the origin at a finite (rather than infinite) speed. This creates a coupling between the particle's random position at the moment of resetting and its return time, and further gives rise to a nontrivial cross-talk between two separate phases of motion: the diffusive phase and the return phase. We show that each of these phases relaxes to the steady state in a unique manner; and while this could have also rendered the total relaxation dynamics extremely nontrivial, our analysis surprisingly reveals otherwise. Indeed, the time-dependent distribution describing the particle's position in our model is completely invariant to the speed of return. Thus, whether returns are slow or fast, we always recover the result originally obtained for diffusion with instantaneous returns to the origin.
Collapse
Affiliation(s)
- Arnab Pal
- School of Chemistry, The Center for Physics and Chemistry of Living Systems, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, and The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Łukasz Kuśmierz
- Laboratory for Neural Computation and Adaptation, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Shlomi Reuveni
- School of Chemistry, The Center for Physics and Chemistry of Living Systems, The Raymond and Beverly Sackler Center for Computational Molecular and Materials Science, and The Mark Ratner Institute for Single Molecule Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel
| |
Collapse
|
121
|
Roldán É, Vivo P. Exact distributions of currents and frenesy for Markov bridges. Phys Rev E 2019; 100:042108. [PMID: 31770868 DOI: 10.1103/physreve.100.042108] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2019] [Indexed: 02/01/2023]
Abstract
We consider discrete-time Markov bridges, chains whose initial and final states coincide. We derive exact finite-time formulae for the joint probability distributions of additive functionals of trajectories. We apply our theory to time-integrated currents and frenesy of enzymatic reactions, which may include absolutely irreversible transitions. We discuss the information that frenesy carries about the currents and show that bridges may violate known uncertainty relations in certain cases. Numerical simulations are in perfect agreement with our theory.
Collapse
Affiliation(s)
- Édgar Roldán
- ICTP-The Abdus Salam International Centre for Theoretical Physics, Strada Costiera 11, 34151 Trieste, Italy
| | - Pierpaolo Vivo
- Department of Mathematics, King's College London, Strand, London WC2R 2LS, United Kingdom
| |
Collapse
|
122
|
Basu U, Kundu A, Pal A. Symmetric exclusion process under stochastic resetting. Phys Rev E 2019; 100:032136. [PMID: 31639904 DOI: 10.1103/physreve.100.032136] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Indexed: 11/07/2022]
Abstract
We study the behavior of a symmetric exclusion process (SEP) in the presence of stochastic resetting where the configuration of the system is reset to a steplike profile with a fixed rate r. We show that the presence of resetting affects both the stationary and dynamical properties of SEPs strongly. We compute the exact time-dependent density profile and show that the stationary state is characterized by a nontrivial inhomogeneous profile in contrast to the flat one for r=0. We also show that for r>0 the average diffusive current grows linearly with time t, in stark contrast to the sqrt[t] growth for r=0. In addition to the underlying diffusive current, we identify the resetting current in the system which emerges due to the sudden relocation of the particles to the steplike configuration and is strongly correlated to the diffusive current. We show that the average resetting current is negative, but its magnitude also grows linearly with time t. We also compute the probability distributions of the diffusive current, resetting current, and total current (sum of the diffusive and the resetting currents) using the renewal approach. We demonstrate that while the typical fluctuations of both the diffusive and reset currents around the mean are typically Gaussian, the distribution of the total current shows a strong non-Gaussian behavior.
Collapse
Affiliation(s)
- Urna Basu
- Raman Research Institute, Bengaluru 560080, India
| | - Anupam Kundu
- International Centre for Theoretical Sciences, Tata Institute of Fundamental Research, Bengaluru 560089, India
| | - Arnab Pal
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.,Center for the Physics and Chemistry of Living Systems, Tel Aviv University, 6997801, Tel Aviv, Israel.,Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| |
Collapse
|
123
|
Pal A, Castillo IP, Kundu A. Motion of a Brownian particle in the presence of reactive boundaries. Phys Rev E 2019; 100:042128. [PMID: 31770986 DOI: 10.1103/physreve.100.042128] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2019] [Indexed: 06/10/2023]
Abstract
We study the one-dimensional motion of a Brownian particle inside a confinement described by two reactive boundaries which can partially reflect or absorb the particle. Understanding the effects of such boundaries is important in physics, chemistry, and biology. We compute the probability density of the particle displacement exactly, from which we derive expressions for the survival probability and the mean absorption time as a function of the reactive coefficients. Furthermore, using the Feynman-Kac formalism, we investigate the local time profile, which is the fluctuating time spent by the particle at a given location, both till a fixed observation time and till the absorption time. Our analytical results are compared to numerical simulations, showing perfect agreement.
Collapse
Affiliation(s)
- Arnab Pal
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel; Center for the Physics and Chemistry of Living Systems, Tel Aviv University, 6997801, Tel Aviv, Israel; and Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| | - Isaac Pérez Castillo
- Department of Quantum Physics and Photonics, Institute of Physics, UNAM, P.O. Box 20-364, 01000 Mexico City, Mexico and London Mathematical Laboratory, 8 Margravine Gardens, London, W6 8RH, United Kingdom
| | - Anupam Kundu
- International Centre for Theoretical Sciences, TIFR, Bangalore 560089, India
| |
Collapse
|
124
|
Masoliver J, Montero M. Anomalous diffusion under stochastic resettings: A general approach. Phys Rev E 2019; 100:042103. [PMID: 31770932 DOI: 10.1103/physreve.100.042103] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Indexed: 06/10/2023]
Abstract
We present a general formulation of the resetting problem which is valid for any distribution of resetting intervals and arbitrary underlying processes. We show that in such a general case, a stationary distribution may exist even if the reset-free process is not stationary, as well as a significant decreasing in the mean first-passage time. We apply the general formalism to anomalous diffusion processes which allow simple and explicit expressions for Poissonian resetting events.
Collapse
Affiliation(s)
- Jaume Masoliver
- Department of Condensed Matter Physics and Institute of Complex Systems (UBICS), University of Barcelona, Catalonia, Spain
| | - Miquel Montero
- Department of Condensed Matter Physics and Institute of Complex Systems (UBICS), University of Barcelona, Catalonia, Spain
| |
Collapse
|
125
|
Kuśmierz Ł, Toyoizumi T. Robust random search with scale-free stochastic resetting. Phys Rev E 2019; 100:032110. [PMID: 31639919 DOI: 10.1103/physreve.100.032110] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2018] [Indexed: 06/10/2023]
Abstract
A new model of search based on stochastic resetting is introduced, wherein rate of resets depends explicitly on time elapsed since the beginning of the process. It is shown that rate inversely proportional to time leads to paradoxical diffusion which mixes self-similarity and linear growth of the mean-square displacement with nonlocality and non-Gaussian propagator. It is argued that such resetting protocol offers a general and efficient search-boosting method that does not need to be optimized with respect to the scale of the underlying search problem (e.g., distance to the goal) and is not very sensitive to other search parameters. Both subdiffusive and superdiffusive regimes of the mean-squared displacement scaling are demonstrated with more general rate functions.
Collapse
Affiliation(s)
- Łukasz Kuśmierz
- Laboratory for Neural Computation and Adaptation, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Taro Toyoizumi
- Laboratory for Neural Computation and Adaptation, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| |
Collapse
|
126
|
Levernier N, Dolgushev M, Bénichou O, Voituriez R, Guérin T. Survival probability of stochastic processes beyond persistence exponents. Nat Commun 2019; 10:2990. [PMID: 31278270 PMCID: PMC6611868 DOI: 10.1038/s41467-019-10841-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Accepted: 05/30/2019] [Indexed: 11/21/2022] Open
Abstract
For many stochastic processes, the probability [Formula: see text] of not-having reached a target in unbounded space up to time [Formula: see text] follows a slow algebraic decay at long times, [Formula: see text]. This is typically the case of symmetric compact (i.e. recurrent) random walks. While the persistence exponent [Formula: see text] has been studied at length, the prefactor [Formula: see text], which is quantitatively essential, remains poorly characterized, especially for non-Markovian processes. Here we derive explicit expressions for [Formula: see text] for a compact random walk in unbounded space by establishing an analytic relation with the mean first-passage time of the same random walk in a large confining volume. Our analytical results for [Formula: see text] are in good agreement with numerical simulations, even for strongly correlated processes such as Fractional Brownian Motion, and thus provide a refined understanding of the statistics of longest first-passage events in unbounded space.
Collapse
Affiliation(s)
- N Levernier
- NCCR Chemical Biology, Departments of Biochemistry and Theoretical Physics, University of Geneva, Geneva, Switzerland
| | - M Dolgushev
- Laboratoire de Physique Théorique de la Matière Condensée, CNRS/Sorbonne Université, 4 Place Jussieu, 75005, Paris, France
| | - O Bénichou
- Laboratoire de Physique Théorique de la Matière Condensée, CNRS/Sorbonne Université, 4 Place Jussieu, 75005, Paris, France
| | - R Voituriez
- Laboratoire de Physique Théorique de la Matière Condensée, CNRS/Sorbonne Université, 4 Place Jussieu, 75005, Paris, France.
- Laboratoire Jean Perrin, CNRS/Sorbonne Université, 4 Place Jussieu, 75005, Paris, France.
| | - T Guérin
- Laboratoire Ondes et Matière d'Aquitaine, University of Bordeaux, Unité Mixte de Recherche 5798, CNRS, F-33400, Talence, France
| |
Collapse
|
127
|
Bodrova AS, Chechkin AV, Sokolov IM. Scaled Brownian motion with renewal resetting. Phys Rev E 2019; 100:012120. [PMID: 31499761 DOI: 10.1103/physreve.100.012120] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Indexed: 05/27/2023]
Abstract
We investigate an intermittent stochastic process in which the diffusive motion with time-dependent diffusion coefficient D(t)∼t^{α-1} with α>0 (scaled Brownian motion) is stochastically reset to its initial position, and starts anew. In the present work we discuss the situation in which the memory on the value of the diffusion coefficient at a resetting time is erased, so that the whole process is a fully renewal one. The situation when the resetting of the coordinate does not affect the diffusion coefficient's time dependence is considered in the other work of this series [A. S. Bodrova et al., Phys. Rev. E 100, 012119 (2019)10.1103/PhysRevE.100.012119]. We show that the properties of the probability densities in such processes (erasing or retaining the memory on the diffusion coefficient) are vastly different. In addition we discuss the first-passage properties of the scaled Brownian motion with renewal resetting and consider the dependence of the efficiency of search on the parameters of the process.
Collapse
Affiliation(s)
- Anna S Bodrova
- Department of Physics, Humboldt University, Newtonstrasse 15, 12489 Berlin, Germany
- Moscow Institute of Electronics and Mathematics, National Research University Higher School of Economics, 123458 Moscow, Russia
- Faculty of Physics, M. V. Lomonosov Moscow State University, Moscow 119991, Russia
| | - Aleksei V Chechkin
- Institute of Physics and Astronomy, University of Potsdam, 14476 Potsdam, Germany
- Akhiezer Institute for Theoretical Physics, Kharkov Institute of Physics and Technology, Kharkov 61108, Ukraine
| | - Igor M Sokolov
- Department of Physics, Humboldt University, Newtonstrasse 15, 12489 Berlin, Germany
| |
Collapse
|
128
|
Kuśmierz Ł, Gudowska-Nowak E. Subdiffusive continuous-time random walks with stochastic resetting. Phys Rev E 2019; 99:052116. [PMID: 31212503 DOI: 10.1103/physreve.99.052116] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Indexed: 06/09/2023]
Abstract
We analyze two models of subdiffusion with stochastic resetting. Each of them consists of two parts: subdiffusion based on the continuous-time random walk scheme and independent resetting events generated uniformly in time according to the Poisson point process. In the first model the whole process is reset to the initial state, whereas in the second model only the position is subject to resets. The distinction between these two models arises from the non-Markovian character of the subdiffusive process. We derive exact expressions for the two lowest moments of the full propagator, stationary distributions, and first hitting time statistics. We also show, with an example of a constant drift, how these models can be generalized to include external forces. Possible applications to data analysis and modeling of biological systems are also discussed.
Collapse
Affiliation(s)
- Łukasz Kuśmierz
- Laboratory for Neural Computation and Adaptation, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Ewa Gudowska-Nowak
- Marian Smoluchowski Institute of Physics, Jagiellonian University, ul. Łojasiewicza 11, 30-348 Kraków, Poland and Mark Kac Complex Systems Research Center, Jagiellonian University, ul. Łojasiewicza 11, 30-348 Kraków, Poland
| |
Collapse
|
129
|
Fractional Prabhakar Derivative in Diffusion Equation with Non-Static Stochastic Resetting. PHYSICS 2019. [DOI: 10.3390/physics1010005] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In this work, we investigate a series of mathematical aspects for the fractional diffusion equation with stochastic resetting. The stochastic resetting process in Evans–Majumdar sense has several applications in science, with a particular emphasis on non-equilibrium physics and biological systems. We propose a version of the stochastic resetting theory for systems in which the reset point is in motion, so the walker does not return to the initial position as in the standard model, but returns to a point that moves in space. In addition, we investigate the proposed stochastic resetting model for diffusion with the fractional operator of Prabhakar. The derivative of Prabhakar consists of an integro-differential operator that has a Mittag–Leffler function with three parameters in the integration kernel, so it generalizes a series of fractional operators such as Riemann–Liouville–Caputo. We present how the generalized model of stochastic resetting for fractional diffusion implies a rich class of anomalous diffusive processes, i.e., ⟨ ( Δ x ) 2 ⟩ ∝ t α , which includes sub-super-hyper-diffusive regimes. In the sequence, we generalize these ideas to the fractional Fokker–Planck equation for quadratic potential U ( x ) = a x 2 + b x + c . This work aims to present the generalized model of Evans–Majumdar’s theory for stochastic resetting under a new perspective of non-static restart points.
Collapse
|
130
|
Pal A, Prasad VV. First passage under stochastic resetting in an interval. Phys Rev E 2019; 99:032123. [PMID: 30999497 DOI: 10.1103/physreve.99.032123] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Indexed: 05/27/2023]
Abstract
We consider a Brownian particle diffusing in a one-dimensional interval with absorbing end points. We study the ramifications when such motion is interrupted and restarted from the same initial configuration. We provide a comprehensive study of the first-passage properties of this trapping phenomena. We compute the mean first-passage time and derive the criterion on which restart always expedites the underlying completion. We show how this set-up is a manifestation of a success-failure problem. We obtain the success and failure rates and relate them with the splitting probabilities, namely the probability that the particle will eventually be trapped on either of the boundaries without hitting the other one. Numerical studies are presented to support our analytic results.
Collapse
Affiliation(s)
- Arnab Pal
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- Center for the Physics and Chemistry of Living Systems. Tel Aviv University, 6997801, Tel Aviv, Israel
- The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| | - V V Prasad
- Department of Physics of Complex Systems, Weizmann Institute of Science, Rehovot 7610001, Israel
| |
Collapse
|
131
|
Sokolov IM. Extreme fluctuation dominance in biology: On the usefulness of wastefulness. Phys Life Rev 2019; 28:88-91. [DOI: 10.1016/j.plrev.2019.03.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 03/12/2019] [Indexed: 11/24/2022]
|
132
|
Ahmad S, Nayak I, Bansal A, Nandi A, Das D. First passage of a particle in a potential under stochastic resetting: A vanishing transition of optimal resetting rate. Phys Rev E 2019; 99:022130. [PMID: 30934275 DOI: 10.1103/physreve.99.022130] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2018] [Indexed: 06/09/2023]
Abstract
First passage in a stochastic process may be influenced by the presence of an external confining potential, as well as "stochastic resetting" in which the process is repeatedly reset back to its initial position. Here, we study the interplay between these two strategies, for a diffusing particle in a one-dimensional trapping potential V(x), being randomly reset at a constant rate r. Stochastic resetting has been of great interest as it is known to provide an "optimal rate" (r_{*}) at which the mean first passage time is a minimum. On the other hand, an attractive potential also assists in the first capture process. Interestingly, we find that for a sufficiently strong external potential, the advantageous optimal resetting rate vanishes (i.e., r_{*}→0). We derive a condition for this optimal resetting rate vanishing transition, which is continuous. We study this problem for various functional forms of V(x), some analytically, and the rest numerically. We find that the optimal rate r_{*} vanishes with a deviation from the critical strength of the potential as a power law with an exponent β which appears to be universal.
Collapse
Affiliation(s)
- Saeed Ahmad
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Indrani Nayak
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Ajay Bansal
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Amitabha Nandi
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Dibyendu Das
- Physics Department, Indian Institute of Technology Bombay, Mumbai 400076, India
| |
Collapse
|
133
|
Pal A, Eliazar I, Reuveni S. First Passage under Restart with Branching. PHYSICAL REVIEW LETTERS 2019; 122:020602. [PMID: 30720306 DOI: 10.1103/physrevlett.122.020602] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2018] [Revised: 11/02/2018] [Indexed: 05/27/2023]
Abstract
First passage under restart with branching is proposed as a generalization of first passage under restart. Strong motivation to study this generalization comes from the observation that restart with branching can expedite the completion of processes that cannot be expedited with simple restart; yet a sharp and quantitative formulation of this statement is still lacking. We develop a comprehensive theory of first passage under restart with branching. This reveals that two widely applied measures of statistical dispersion-the coefficient of variation and the Gini index-come together to determine how restart with branching affects the mean completion time of an arbitrary stochastic process. The universality of this result is demonstrated and its connection to extreme value theory is also pointed out and explored.
Collapse
Affiliation(s)
- Arnab Pal
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- Center for the Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
- The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, Tel Aviv 6997801, Israel
| | | | - Shlomi Reuveni
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- Center for the Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
- The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, Tel Aviv 6997801, Israel
| |
Collapse
|
134
|
Masó-Puigdellosas A, Campos D, Méndez V. Transport properties and first-arrival statistics of random motion with stochastic reset times. Phys Rev E 2019; 99:012141. [PMID: 30780220 DOI: 10.1103/physreve.99.012141] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2018] [Indexed: 06/09/2023]
Abstract
Stochastic resets have lately emerged as a mechanism able to generate finite equilibrium mean-square displacement (MSD) when they are applied to diffusive motion. Furthermore, walkers with an infinite mean first-arrival time (MFAT) to a given position x may reach it in a finite time when they reset their position. In this work we study these emerging phenomena from a unified perspective. On one hand, we study the existence of a finite equilibrium MSD when resets are applied to random motion with 〈x^{2}(t)〉_{m}∼t^{p} for 0<p≤2. For exponentially distributed reset times, a compact formula is derived for the equilibrium MSD of the overall process in terms of the mean reset time and the motion MSD. On the other hand, we also test the robustness of the finiteness of the MFAT for different motion dynamics which are subject to stochastic resets. Finally, we study a biased Brownian oscillator with resets with the general formulas derived in this work, finding its equilibrium first moment and MSD and its MFAT to the minimum of the harmonic potential.
Collapse
Affiliation(s)
- Axel Masó-Puigdellosas
- Grup de Física Estadística, Departament de Física, Facultat de Ciències, Edifici Cc. Universitat Autònoma de Barcelona, 08193 Bellaterra (Barcelona), Spain
| | - Daniel Campos
- Grup de Física Estadística, Departament de Física, Facultat de Ciències, Edifici Cc. Universitat Autònoma de Barcelona, 08193 Bellaterra (Barcelona), Spain
| | - Vicenç Méndez
- Grup de Física Estadística, Departament de Física, Facultat de Ciències, Edifici Cc. Universitat Autònoma de Barcelona, 08193 Bellaterra (Barcelona), Spain
| |
Collapse
|
135
|
Abstract
We investigate the effects of resetting mechanisms on random processes that follow the telegrapher's equation instead of the usual diffusion equation. We thus study the consequences of a finite speed of signal propagation, the landmark of telegraphic processes. Likewise diffusion processes where signal propagation is instantaneous, we show that in telegraphic processes, where signal propagation is not instantaneous, random resettings also stabilize the random walk around the resetting position and optimize the mean first-arrival time. We also obtain the exact evolution equations for the probability density of the combined process and study the limiting cases.
Collapse
Affiliation(s)
- Jaume Masoliver
- Department of Condensed Matter Physics and Institute of Complex Systems (UBICS), University of Barcelona, Catalonia, Spain
| |
Collapse
|
136
|
Thermodynamics of Superdiffusion Generated by Lévy-Wiener Fluctuating Forces. ENTROPY 2018; 20:e20090658. [PMID: 33265747 PMCID: PMC7513181 DOI: 10.3390/e20090658] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 08/16/2018] [Accepted: 08/29/2018] [Indexed: 11/25/2022]
Abstract
Scale free Lévy motion is a generalized analogue of the Wiener process. Its time derivative extends the notion of “white noise” to non-Gaussian noise sources, and as such, it has been widely used to model natural signal variations described by an overdamped Langevin stochastic differential equation. Here, we consider the dynamics of an archetypal model: a Brownian-like particle is driven by external forces, and noise is represented by uncorrelated Lévy fluctuations. An unperturbed system of that form eventually attains a steady state which is uniquely determined by the set of parameter values. We show that the analyzed Markov process with the stability index α<2 violates the detailed balance, i.e., its stationary state is quantified by a stationary probability density and nonvanishing current. We discuss consequences of the non-Gibbsian character of the stationary state of the system and its impact on the general form of the fluctuation–dissipation theorem derived for weak external forcing.
Collapse
|
137
|
Chechkin A, Sokolov IM. Random Search with Resetting: A Unified Renewal Approach. PHYSICAL REVIEW LETTERS 2018; 121:050601. [PMID: 30118268 DOI: 10.1103/physrevlett.121.050601] [Citation(s) in RCA: 88] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Indexed: 05/27/2023]
Abstract
We provide a unified renewal approach to the problem of random search for several targets under resetting. This framework does not rely on specific properties of the search process and resetting procedure, allows for simpler derivation of known results, and leads to new ones. Concentrating on minimizing the mean hitting time, we show that resetting at a constant pace is the best possible option if resetting helps at all, and derive the equation for the optimal resetting pace. No resetting may be a better strategy if without resetting the probability of not finding a target decays with time to zero exponentially or faster. We also calculate splitting probabilities between the targets, and define the limits in which these can be manipulated by changing the resetting procedure. We moreover show that the number of moments of the hitting time distribution under resetting is not less than the sum of the numbers of moments of the resetting time distribution and the hitting time distribution without resetting.
Collapse
Affiliation(s)
- A Chechkin
- Institute of Physics and Astronomy, Potsdam University, Karl-Liebknecht-Strasse 24/25, 14476 Potsdam-Golm, Germany Akhiezer Institute for Theoretical Physics, Akademicheskaya Street 1, 61108 Kharkow, Ukraine
| | - I M Sokolov
- Institut für Physik and IRIS Adlershof, Humboldt Universität zu Berlin, Newtonstraße 15, 12489 Berlin, Germany
| |
Collapse
|
138
|
Rose DC, Touchette H, Lesanovsky I, Garrahan JP. Spectral properties of simple classical and quantum reset processes. Phys Rev E 2018; 98:022129. [PMID: 30253565 DOI: 10.1103/physreve.98.022129] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Indexed: 06/08/2023]
Abstract
We study the spectral properties of classical and quantum Markovian processes that are reset at random times to a specific configuration or state with a reset rate that is independent of the current state of the system. We demonstrate that this simple reset dynamics causes a uniform shift in the eigenvalues of the Markov generator, excluding the zero mode corresponding to the stationary state, which has the effect of accelerating or even inducing relaxation to a stationary state. Based on this result, we provide expressions for the stationary state and probability current of the reset process in terms of weighted sums over dynamical modes of the reset-free process. We also discuss the effect of resets on processes that display metastability. We illustrate our results with two classical stochastic processes, the totally asymmetric random walk and the one-dimensional Brownian motion, as well as two quantum models: a particle coherently hopping on a chain and the dissipative transverse field Ising model, known to exhibit metastability.
Collapse
Affiliation(s)
- Dominic C Rose
- School of Physics and Astronomy, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
- Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
| | - Hugo Touchette
- National Institute for Theoretical Physics (NITheP), Stellenbosch 7600, South Africa
- Institute of Theoretical Physics, Department of Physics, University of Stellenbosch, Stellenbosch 7600, South Africa
| | - Igor Lesanovsky
- School of Physics and Astronomy, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
- Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
| | - Juan P Garrahan
- School of Physics and Astronomy, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
- Centre for the Mathematics and Theoretical Physics of Quantum Non-Equilibrium Systems, University of Nottingham, Nottingham, NG7 2RD, United Kingdom
| |
Collapse
|
139
|
Chatterjee A, Christou C, Schadschneider A. Diffusion with resetting inside a circle. Phys Rev E 2018; 97:062106. [PMID: 30011581 DOI: 10.1103/physreve.97.062106] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Indexed: 06/08/2023]
Abstract
We study the Brownian motion of a particle in a bounded circular two-dimensional domain in search for a stationary target on the boundary of the domain. The process switches between two modes: one where it performs a two-dimensional diffusion inside the circle and one where it diffuses along the one-dimensional boundary. During the process, the Brownian particle resets to its initial position with a constant rate r. The Fokker-Planck formalism allows us to calculate the mean time to absorption (MTA) as well as the optimal resetting rate for which the MTA is minimized. From the derived analytical results the parameter regions where resetting reduces the search time can be specified. We also provide a numerical method for the verification of our results.
Collapse
Affiliation(s)
- Abhinava Chatterjee
- Institute for Theoretical Physics, University of Cologne, Zülpicher Straße 77, D-50937 Köln, Germany
- Department of Physical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur 741246, India
| | - Christos Christou
- Institute for Theoretical Physics, University of Cologne, Zülpicher Straße 77, D-50937 Köln, Germany
| | - Andreas Schadschneider
- Institute for Theoretical Physics, University of Cologne, Zülpicher Straße 77, D-50937 Köln, Germany
| |
Collapse
|
140
|
Ornigotti L, Ryabov A, Holubec V, Filip R. Brownian motion surviving in the unstable cubic potential and the role of Maxwell's demon. Phys Rev E 2018; 97:032127. [PMID: 29776045 DOI: 10.1103/physreve.97.032127] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2017] [Indexed: 06/08/2023]
Abstract
The trajectories of an overdamped particle in a highly unstable potential diverge so rapidly, that the variance of position grows much faster than its mean. A description of the dynamics by moments is therefore not informative. Instead, we propose and analyze local directly measurable characteristics, which overcome this limitation. We discuss the most probable particle position (position of the maximum of the probability density) and the local uncertainty in an unstable cubic potential, V(x)∼x^{3}, both in the transient regime and in the long-time limit. The maximum shifts against the acting force as a function of time and temperature. Simultaneously, the local uncertainty does not increase faster than the observable shift. In the long-time limit, the probability density naturally attains a quasistationary form. We interpret this process as a stabilization via the measurement-feedback mechanism, the Maxwell demon, which works as an entropy pump. The rules for measurement and feedback naturally arise from the basic properties of the unstable dynamics. All reported effects are inherent in any unstable system. Their detailed understanding will stimulate the development of stochastic engines and amplifiers and, later, their quantum counterparts.
Collapse
Affiliation(s)
- Luca Ornigotti
- Department of Optics, Palacký University, 17. listopadu 1192/12, CZ-771 46 Olomouc, Czech Republic
| | - Artem Ryabov
- Charles University, Faculty of Mathematics and Physics, Department of Macromolecular Physics, V Holešovičkách 2, CZ-180 00 Praha 8, Czech Republic
| | - Viktor Holubec
- Charles University, Faculty of Mathematics and Physics, Department of Macromolecular Physics, V Holešovičkách 2, CZ-180 00 Praha 8, Czech Republic
- Institut für Theoretische Physik, Universität Leipzig, Postfach 100 920, D-04009 Leipzig, Germany
| | - Radim Filip
- Department of Optics, Palacký University, 17. listopadu 1192/12, CZ-771 46 Olomouc, Czech Republic
| |
Collapse
|
141
|
Robin T, Reuveni S, Urbakh M. Single-molecule theory of enzymatic inhibition. Nat Commun 2018; 9:779. [PMID: 29472579 PMCID: PMC5823943 DOI: 10.1038/s41467-018-02995-6] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Accepted: 01/12/2018] [Indexed: 12/19/2022] Open
Abstract
The classical theory of enzymatic inhibition takes a deterministic, bulk based approach to quantitatively describe how inhibitors affect the progression of enzymatic reactions. Catalysis at the single-enzyme level is, however, inherently stochastic which could lead to strong deviations from classical predictions. To explore this, we take the single-enzyme perspective and rebuild the theory of enzymatic inhibition from the bottom up. We find that accounting for multi-conformational enzyme structure and intrinsic randomness should strongly change our view on the uncompetitive and mixed modes of inhibition. There, stochastic fluctuations at the single-enzyme level could make inhibitors act as activators; and we state—in terms of experimentally measurable quantities—a mathematical condition for the emergence of this surprising phenomenon. Our findings could explain why certain molecules that inhibit enzymatic activity when substrate concentrations are high, elicit a non-monotonic dose response when substrate concentrations are low. Single molecule approaches demonstrated that enzymatic catalysis is stochastic which could lead to deviations from classical predictions. Here authors rebuild the theory of enzymatic inhibition to show that stochastic fluctuations on the single enzyme level could make inhibitors act as activators.
Collapse
Affiliation(s)
- Tal Robin
- School of Chemistry and The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| | - Shlomi Reuveni
- School of Chemistry and The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel. .,Department of Systems Biology, HMS, Harvard University, 200 Longwood Avenue, Boston, MA, 02115, USA.
| | - Michael Urbakh
- School of Chemistry and The Sackler Center for Computational Molecular and Materials Science, Tel Aviv University, 6997801, Tel Aviv, Israel
| |
Collapse
|
142
|
Pal A, Rahav S. Integral fluctuation theorems for stochastic resetting systems. Phys Rev E 2017; 96:062135. [PMID: 29347389 DOI: 10.1103/physreve.96.062135] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2017] [Indexed: 05/27/2023]
Abstract
We study the stochastic thermodynamics of resetting systems. Violation of microreversibility means that the well-known derivations of fluctuations theorems break down for dynamics with resetting. Despite that we show that stochastic resetting systems satisfy two integral fluctuation theorems. The first is the Hatano-Sasa relation describing the transition between two steady states. The second integral fluctuation theorem involves a functional that includes both dynamical and thermodynamic contributions. We find that the second law-like inequality found by Fuchs et al. for resetting systems [Europhys. Lett. 113, 60009 (2016)EULEEJ0295-507510.1209/0295-5075/113/60009] can be recovered from this integral fluctuation theorem with the help of Jensen's inequality.
Collapse
Affiliation(s)
- Arnab Pal
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa 32000, Israel
| | - Saar Rahav
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa 32000, Israel
| |
Collapse
|
143
|
Falcón-Cortés A, Boyer D, Giuggioli L, Majumdar SN. Localization Transition Induced by Learning in Random Searches. PHYSICAL REVIEW LETTERS 2017; 119:140603. [PMID: 29053283 DOI: 10.1103/physrevlett.119.140603] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2017] [Indexed: 06/07/2023]
Abstract
We solve an adaptive search model where a random walker or Lévy flight stochastically resets to previously visited sites on a d-dimensional lattice containing one trapping site. Because of reinforcement, a phase transition occurs when the resetting rate crosses a threshold above which nondiffusive stationary states emerge, localized around the inhomogeneity. The threshold depends on the trapping strength and on the walker's return probability in the memoryless case. The transition belongs to the same class as the self-consistent theory of Anderson localization. These results show that similarly to many living organisms and unlike the well-studied Markovian walks, non-Markov movement processes can allow agents to learn about their environment and promise to bring adaptive solutions in search tasks.
Collapse
Affiliation(s)
- Andrea Falcón-Cortés
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico
| | - Denis Boyer
- Instituto de Física, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico
| | - Luca Giuggioli
- Bristol Centre for Complexity Sciences, Department of Engineering Mathematics and School of Biological Sciences, University of Bristol, Bristol BS8 1UB, United Kingdom
| | - Satya N Majumdar
- Université Paris-Sud, CNRS, LPTMS, UMR 8626, Orsay F-91405, France
| |
Collapse
|
144
|
Roldán É, Gupta S. Path-integral formalism for stochastic resetting: Exactly solved examples and shortcuts to confinement. Phys Rev E 2017; 96:022130. [PMID: 28950574 DOI: 10.1103/physreve.96.022130] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Indexed: 06/07/2023]
Abstract
We study the dynamics of overdamped Brownian particles diffusing in conservative force fields and undergoing stochastic resetting to a given location at a generic space-dependent rate of resetting. We present a systematic approach involving path integrals and elements of renewal theory that allows us to derive analytical expressions for a variety of statistics of the dynamics such as (i) the propagator prior to first reset, (ii) the distribution of the first-reset time, and (iii) the spatial distribution of the particle at long times. We apply our approach to several representative and hitherto unexplored examples of resetting dynamics. A particularly interesting example for which we find analytical expressions for the statistics of resetting is that of a Brownian particle trapped in a harmonic potential with a rate of resetting that depends on the instantaneous energy of the particle. We find that using energy-dependent resetting processes is more effective in achieving spatial confinement of Brownian particles on a faster time scale than performing quenches of parameters of the harmonic potential.
Collapse
Affiliation(s)
- Édgar Roldán
- Max-Planck Institute for the Physics of Complex Systems, cfAED and GISC, Nöthnitzer Straße 38, 01187 Dresden, Germany
| | - Shamik Gupta
- Department of Physics, Ramakrishna Mission Vivekananda University, Belur Math, Howrah 711 202, West Bengal, India
| |
Collapse
|
145
|
Lapeyre GJ, Dentz M. Reaction–diffusion with stochastic decay rates. Phys Chem Chem Phys 2017; 19:18863-18879. [DOI: 10.1039/c7cp02971c] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Microscopic physical and chemical fluctuations in a reaction–diffusion system lead to anomalous chemical kinetics and transport on the mesoscopic scale. Emergent non-Markovian effects lead to power-law reaction times and localization of reacting species.
Collapse
Affiliation(s)
- G. John Lapeyre
- Spanish National Research Council (IDAEA-CSIC)
- E-08034 Barcelona
- Spain
- ICFO–Institut de Ciències Fotòniques
- Mediterranean Technology Park
| | - Marco Dentz
- Spanish National Research Council (IDAEA-CSIC)
- E-08034 Barcelona
- Spain
| |
Collapse
|