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Singh P, Kaur R. An integrated fog and Artificial Intelligence smart health framework to predict and prevent COVID-19. GLOBAL TRANSITIONS 2020; 2:283-292. [PMID: 33205037 PMCID: PMC7659515 DOI: 10.1016/j.glt.2020.11.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Revised: 10/09/2020] [Accepted: 11/01/2020] [Indexed: 05/18/2023]
Abstract
Nowadays, COVID-19 is spreading at a rapid rate in almost all the continents of the world. It has already affected many people who are further spreading it day by day. Hence, it is the most essential to alert nearby people to be aware of it due to its communicable behavior. Till May 2020, no vaccine is available for the treatment of this COVID-19, but the existing technologies can be used to minimize its effect. Cloud/fog computing could be used to monitor and control this rapidly spreading infection in a cost-effective and time-saving manner. To strengthen COVID-19 patient prediction, Artificial Intelligence(AI) can be integrated with cloud/fog computing for practical solutions. In this paper, fog assisted the internet of things based quality of service framework is presented to prevent and protect from COVID-19. It provides real-time processing of users' health data to predict the COVID-19 infection by observing their symptoms and immediately generates an emergency alert, medical reports, and significant precautions to the user, their guardian as well as doctors/experts. It collects sensitive information from the hospitals/quarantine shelters through the patient IoT devices for taking necessary actions/decisions. Further, it generates an alert message to the government health agencies for controlling the outbreak of chronic illness and for tanking quick and timely actions.
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Affiliation(s)
- Prabhdeep Singh
- Department of Computer Science & Engineering, Punjabi University, Patiala, IN, India
| | - Rajbir Kaur
- Department of Electronics & Communication Engineering, Punjabi University, Patiala, IN, India
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152
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Amyar A, Modzelewski R, Li H, Ruan S. Multi-task deep learning based CT imaging analysis for COVID-19 pneumonia: Classification and segmentation. Comput Biol Med 2020. [PMID: 33065387 DOI: 10.1101/2020.04.16.20064709] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
This paper presents an automatic classification segmentation tool for helping screening COVID-19 pneumonia using chest CT imaging. The segmented lesions can help to assess the severity of pneumonia and follow-up the patients. In this work, we propose a new multitask deep learning model to jointly identify COVID-19 patient and segment COVID-19 lesion from chest CT images. Three learning tasks: segmentation, classification and reconstruction are jointly performed with different datasets. Our motivation is on the one hand to leverage useful information contained in multiple related tasks to improve both segmentation and classification performances, and on the other hand to deal with the problems of small data because each task can have a relatively small dataset. Our architecture is composed of a common encoder for disentangled feature representation with three tasks, and two decoders and a multi-layer perceptron for reconstruction, segmentation and classification respectively. The proposed model is evaluated and compared with other image segmentation techniques using a dataset of 1369 patients including 449 patients with COVID-19, 425 normal ones, 98 with lung cancer and 397 of different kinds of pathology. The obtained results show very encouraging performance of our method with a dice coefficient higher than 0.88 for the segmentation and an area under the ROC curve higher than 97% for the classification.
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Affiliation(s)
- Amine Amyar
- General Electric Healthcare, Buc, France; LITIS - EA4108 - Quantif, University of Rouen, Rouen, France.
| | - Romain Modzelewski
- LITIS - EA4108 - Quantif, University of Rouen, Rouen, France; Nuclear Medicine Department, Henri Becquerel Center, Rouen, France.
| | - Hua Li
- Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Su Ruan
- LITIS - EA4108 - Quantif, University of Rouen, Rouen, France.
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153
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Amyar A, Modzelewski R, Li H, Ruan S. Multi-task deep learning based CT imaging analysis for COVID-19 pneumonia: Classification and segmentation. Comput Biol Med 2020; 126:104037. [PMID: 33065387 PMCID: PMC7543793 DOI: 10.1016/j.compbiomed.2020.104037] [Citation(s) in RCA: 233] [Impact Index Per Article: 46.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 09/29/2020] [Accepted: 10/03/2020] [Indexed: 12/13/2022]
Abstract
This paper presents an automatic classification segmentation tool for helping screening COVID-19 pneumonia using chest CT imaging. The segmented lesions can help to assess the severity of pneumonia and follow-up the patients. In this work, we propose a new multitask deep learning model to jointly identify COVID-19 patient and segment COVID-19 lesion from chest CT images. Three learning tasks: segmentation, classification and reconstruction are jointly performed with different datasets. Our motivation is on the one hand to leverage useful information contained in multiple related tasks to improve both segmentation and classification performances, and on the other hand to deal with the problems of small data because each task can have a relatively small dataset. Our architecture is composed of a common encoder for disentangled feature representation with three tasks, and two decoders and a multi-layer perceptron for reconstruction, segmentation and classification respectively. The proposed model is evaluated and compared with other image segmentation techniques using a dataset of 1369 patients including 449 patients with COVID-19, 425 normal ones, 98 with lung cancer and 397 of different kinds of pathology. The obtained results show very encouraging performance of our method with a dice coefficient higher than 0.88 for the segmentation and an area under the ROC curve higher than 97% for the classification.
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Affiliation(s)
- Amine Amyar
- General Electric Healthcare, Buc, France; LITIS - EA4108 - Quantif, University of Rouen, Rouen, France.
| | - Romain Modzelewski
- LITIS - EA4108 - Quantif, University of Rouen, Rouen, France; Nuclear Medicine Department, Henri Becquerel Center, Rouen, France.
| | - Hua Li
- Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Su Ruan
- LITIS - EA4108 - Quantif, University of Rouen, Rouen, France.
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154
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Singh D, Kumar V, Yadav V, Kaur M. Deep Neural Network-Based Screening Model for COVID-19-Infected Patients Using Chest X-Ray Images. INT J PATTERN RECOGN 2020. [DOI: 10.1142/s0218001421510046] [Citation(s) in RCA: 54] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
There are limited coronavirus disease 2019 (COVID-19) testing kits, therefore, development of other diagnosis approaches is desirable. The doctors generally utilize chest X-rays and Computed Tomography (CT) scans to diagnose pneumonia, lung inflammation, abscesses, and/or enlarged lymph nodes. Since COVID-19 attacks the epithelial cells that line our respiratory tract, therefore, X-ray images are utilized in this paper, to classify the patients with infected (COVID-19 [Formula: see text]ve) and uninfected (COVID-19 [Formula: see text]ve) lungs. Almost all hospitals have X-ray imaging machines, therefore, the chest X-ray images can be used to test for COVID-19 without utilizing any kind of dedicated test kits. However, the chest X-ray-based COVID-19 classification requires a radiology expert and significant time, which is precious when COVID-19 infection is increasing at a rapid rate. Therefore, the development of an automated analysis approach is desirable to save the medical professionals’ valuable time. In this paper, a deep convolutional neural network (CNN) approach is designed and implemented. Besides, the hyper-parameters of CNN are tuned using Multi-objective Adaptive Differential Evolution (MADE). Extensive experiments are performed by considering the benchmark COVID-19 dataset. Comparative analysis reveals that the proposed technique outperforms the competitive machine learning models in terms of various performance metrics.
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Affiliation(s)
- Dilbag Singh
- Computer Science Engineering, School of Engineering and Applied Sciences, Bennett University, Greater Noida, 201310, India
| | - Vijay Kumar
- National Institute of Technology Hamirpur, Hamirpur 177005, Himachal Pradesh, India
| | - Vaishali Yadav
- Department of Computer and Communication Engineering, Manipal University Jaipur, Jaipur 303007, Rajasthan, India
| | - Manjit Kaur
- Computer Science Engineering, School of Engineering and Applied Sciences, Bennett University, Greater Noida, 201310, India
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155
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Ozsahin I, Sekeroglu B, Musa MS, Mustapha MT, Uzun Ozsahin D. Review on Diagnosis of COVID-19 from Chest CT Images Using Artificial Intelligence. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2020; 2020:9756518. [PMID: 33014121 PMCID: PMC7519983 DOI: 10.1155/2020/9756518] [Citation(s) in RCA: 89] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 08/28/2020] [Accepted: 09/16/2020] [Indexed: 02/07/2023]
Abstract
The COVID-19 diagnostic approach is mainly divided into two broad categories, a laboratory-based and chest radiography approach. The last few months have witnessed a rapid increase in the number of studies use artificial intelligence (AI) techniques to diagnose COVID-19 with chest computed tomography (CT). In this study, we review the diagnosis of COVID-19 by using chest CT toward AI. We searched ArXiv, MedRxiv, and Google Scholar using the terms "deep learning", "neural networks", "COVID-19", and "chest CT". At the time of writing (August 24, 2020), there have been nearly 100 studies and 30 studies among them were selected for this review. We categorized the studies based on the classification tasks: COVID-19/normal, COVID-19/non-COVID-19, COVID-19/non-COVID-19 pneumonia, and severity. The sensitivity, specificity, precision, accuracy, area under the curve, and F1 score results were reported as high as 100%, 100%, 99.62, 99.87%, 100%, and 99.5%, respectively. However, the presented results should be carefully compared due to the different degrees of difficulty of different classification tasks.
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Affiliation(s)
- Ilker Ozsahin
- Department of Biomedical Engineering, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
- DESAM Institute, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
| | - Boran Sekeroglu
- DESAM Institute, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
- Department of Artificial Intelligence Engineering, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
| | - Musa Sani Musa
- Department of Biomedical Engineering, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
| | - Mubarak Taiwo Mustapha
- Department of Biomedical Engineering, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
- DESAM Institute, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
| | - Dilber Uzun Ozsahin
- Department of Biomedical Engineering, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
- DESAM Institute, Near East University, Nicosia / TRNC, Mersin-10, 99138, Turkey
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156
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Wu C, Chen L. Infrared and visible image fusion method of dual NSCT and PCNN. PLoS One 2020; 15:e0239535. [PMID: 32946533 PMCID: PMC7500666 DOI: 10.1371/journal.pone.0239535] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 09/09/2020] [Indexed: 11/19/2022] Open
Abstract
To solve the problem that the details of fusion images are not retained well and the information of feature targets is incomplete, we proposed a new fusion method of infrared (IR) and visible (VI) image-IR and VI image fusion method of dual non-subsampled contourlet transform (NSCT) and pulse-coupled neural network (PCNN). The method makes full use of the flexible multi-resolution and multi-directional of NSCT, and the global coupling and pulse synchronization excitation characteristics of PCNN, effectively combining the features of IR image with the texture details of VI image. Experimental results show that the algorithm can combine IR and VI image features well. At the same time, the obtained fusion image can better display the texture information of image. The fusion performance in contrast, detail information and other aspects is better than the classical fusion algorithm, which has better visual effect and evaluation index.
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Affiliation(s)
- Chunming Wu
- Key Laboratory of Modern Power System Simulation and Control & Renewable Energy Technology, Ministry of Education (Northeast Electric Power University), Jilin, China
- Department of Electrical Engineering, Northeast Electric Power University, Jilin, China
| | - Long Chen
- Department of Electrical Engineering, Northeast Electric Power University, Jilin, China
- * E-mail:
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157
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End-To-End Deep Learning Framework for Coronavirus (COVID-19) Detection and Monitoring. ELECTRONICS 2020. [DOI: 10.3390/electronics9091439] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Coronavirus (COVID-19) is a new virus of viral pneumonia. It can outbreak in the world through person-to-person transmission. Although several medical companies provide cooperative monitoring healthcare systems, these solutions lack offering of the end-to-end management of the disease. The main objective of the proposed framework is to bridge the current gap between current technologies and healthcare systems. The wireless body area network, cloud computing, fog computing, and clinical decision support system are integrated to provide a comprehensive and complete model for disease detection and monitoring. By monitoring a person with COVID-19 in real time, physicians can guide patients with the right decisions. The proposed framework has three main layers (i.e., a patient layer, cloud layer, and hospital layer). In the patient layer, the patient is tracked through a set of wearable sensors and a mobile app. In the cloud layer, a fog network architecture is proposed to solve the issues of storage and data transmission. In the hospital layer, we propose a convolutional neural network-based deep learning model for COVID-19 detection based on patient’s X-ray scan images and transfer learning. The proposed model achieved promising results compared to the state-of-the art (i.e., accuracy of 97.95% and specificity of 98.85%). Our framework is a useful application, through which we expect significant effects on COVID-19 proliferation and considerable lowering in healthcare expenses.
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158
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Prediction of respiratory decompensation in Covid-19 patients using machine learning: The READY trial. Comput Biol Med 2020; 124:103949. [PMID: 32798922 PMCID: PMC7410013 DOI: 10.1016/j.compbiomed.2020.103949] [Citation(s) in RCA: 76] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Revised: 07/28/2020] [Accepted: 07/28/2020] [Indexed: 12/22/2022]
Abstract
Background Currently, physicians are limited in their ability to provide an accurate prognosis for COVID-19 positive patients. Existing scoring systems have been ineffective for identifying patient decompensation. Machine learning (ML) may offer an alternative strategy. A prospectively validated method to predict the need for ventilation in COVID-19 patients is essential to help triage patients, allocate resources, and prevent emergency intubations and their associated risks. Methods In a multicenter clinical trial, we evaluated the performance of a machine learning algorithm for prediction of invasive mechanical ventilation of COVID-19 patients within 24 h of an initial encounter. We enrolled patients with a COVID-19 diagnosis who were admitted to five United States health systems between March 24 and May 4, 2020. Results 197 patients were enrolled in the REspirAtory Decompensation and model for the triage of covid-19 patients: a prospective studY (READY) clinical trial. The algorithm had a higher diagnostic odds ratio (DOR, 12.58) for predicting ventilation than a comparator early warning system, the Modified Early Warning Score (MEWS). The algorithm also achieved significantly higher sensitivity (0.90) than MEWS, which achieved a sensitivity of 0.78, while maintaining a higher specificity (p < 0.05). Conclusions In the first clinical trial of a machine learning algorithm for ventilation needs among COVID-19 patients, the algorithm demonstrated accurate prediction of the need for mechanical ventilation within 24 h. This algorithm may help care teams effectively triage patients and allocate resources. Further, the algorithm is capable of accurately identifying 16% more patients than a widely used scoring system while minimizing false positive results. Validation of prediction algorithm for ventilation requirements in COVID-19 patients. Algorithm achieved significantly higher sensitivity than the common scoring system MEWS. Algorithm detected 16% more patients who will require invasive ventilation than MEWS. Advance warning of ventilation needs can help improve COVID-19 patient outcomes.
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159
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Jaiswal A, Gianchandani N, Singh D, Kumar V, Kaur M. Classification of the COVID-19 infected patients using DenseNet201 based deep transfer learning. J Biomol Struct Dyn 2020; 39:5682-5689. [PMID: 32619398 DOI: 10.1080/07391102.2020.1788642] [Citation(s) in RCA: 201] [Impact Index Per Article: 40.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Deep learning models are widely used in the automatic analysis of radiological images. These techniques can train the weights of networks on large datasets as well as fine tuning the weights of pre-trained networks on small datasets. Due to the small COVID-19 dataset available, the pre-trained neural networks can be used for diagnosis of coronavirus. However, these techniques applied on chest CT image is very limited till now. Hence, the main aim of this paper to use the pre-trained deep learning architectures as an automated tool to detection and diagnosis of COVID-19 in chest CT. A DenseNet201 based deep transfer learning (DTL) is proposed to classify the patients as COVID infected or not i.e. COVID-19 (+) or COVID (-). The proposed model is utilized to extract features by using its own learned weights on the ImageNet dataset along with a convolutional neural structure. Extensive experiments are performed to evaluate the performance of the propose DTL model on COVID-19 chest CT scan images. Comparative analyses reveal that the proposed DTL based COVID-19 classification model outperforms the competitive approaches.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Aayush Jaiswal
- Department of Computer Science and Engineering, School of Computing and Information Technology, Manipal University Jaipur, Jaipur, India
| | - Neha Gianchandani
- Department of Computer Science and Engineering, School of Computing and Information Technology, Manipal University Jaipur, Jaipur, India
| | - Dilbag Singh
- Department of Computer Science and Engineering, School of Computing and Information Technology, Manipal University Jaipur, Jaipur, India
| | - Vijay Kumar
- Department of Computer Science and Engineering, National Institute of Technology Hamirpur, Hamirpur, India
| | - Manjit Kaur
- Department of Computer and Communication Engineering, School of Computing and Information Technology, Manipal University Jaipur, Jaipur, India
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