151
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Feature Selection Applying Statistical and Neurofuzzy Methods to EEG-Based BCI. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2015; 2015:781207. [PMID: 25977685 PMCID: PMC4419264 DOI: 10.1155/2015/781207] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 03/22/2015] [Accepted: 03/23/2015] [Indexed: 12/02/2022]
Abstract
This paper presents an investigation aimed at drastically reducing the processing burden required by motor imagery brain-computer interface (BCI) systems based on electroencephalography (EEG). In this research, the focus has moved from the channel to the feature paradigm, and a 96% reduction of the number of features required in the process has been achieved maintaining and even improving the classification success rate. This way, it is possible to build cheaper, quicker, and more portable BCI systems. The data set used was provided within the framework of BCI Competition III, which allows it to compare the presented results with the classification accuracy achieved in the contest. Furthermore, a new three-step
methodology has been developed which includes a feature discriminant character calculation stage; a score, order, and
selection phase; and a final feature selection step. For the first stage, both statistics method and fuzzy criteria are used.
The fuzzy criteria are based on the S-dFasArt classification algorithm which has shown excellent performance in previous papers
undertaking the BCI multiclass motor imagery problem. The score, order, and selection stage is used to sort the features according
to their discriminant nature. Finally, both order selection and Group Method Data Handling (GMDH) approaches are used to choose
the most discriminant ones.
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152
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Yang H, Guan C, Wang CC, Ang KK. Detection of motor imagery of brisk walking from electroencephalogram. J Neurosci Methods 2015; 244:33-44. [DOI: 10.1016/j.jneumeth.2014.05.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2014] [Revised: 05/03/2014] [Accepted: 05/06/2014] [Indexed: 10/25/2022]
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153
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Simultaneous channel and feature selection of fused EEG features based on Sparse Group Lasso. BIOMED RESEARCH INTERNATIONAL 2015; 2015:703768. [PMID: 25802861 PMCID: PMC4354735 DOI: 10.1155/2015/703768] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2014] [Revised: 01/17/2015] [Accepted: 01/19/2015] [Indexed: 11/18/2022]
Abstract
Feature extraction and classification of EEG signals are core parts of brain computer interfaces (BCIs). Due to the high dimension of the EEG feature vector, an effective feature selection algorithm has become an integral part of research studies. In this paper, we present a new method based on a wrapped Sparse Group Lasso for channel and feature selection of fused EEG signals. The high-dimensional fused features are firstly obtained, which include the power spectrum, time-domain statistics, AR model, and the wavelet coefficient features extracted from the preprocessed EEG signals. The wrapped channel and feature selection method is then applied, which uses the logistical regression model with Sparse Group Lasso penalized function. The model is fitted on the training data, and parameter estimation is obtained by modified blockwise coordinate descent and coordinate gradient descent method. The best parameters and feature subset are selected by using a 10-fold cross-validation. Finally, the test data is classified using the trained model. Compared with existing channel and feature selection methods, results show that the proposed method is more suitable, more stable, and faster for high-dimensional feature fusion. It can simultaneously achieve channel and feature selection with a lower error rate. The test accuracy on the data used from international BCI Competition IV reached 84.72%.
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154
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Yuan H, He B. Brain-computer interfaces using sensorimotor rhythms: current state and future perspectives. IEEE Trans Biomed Eng 2015; 61:1425-35. [PMID: 24759276 DOI: 10.1109/tbme.2014.2312397] [Citation(s) in RCA: 255] [Impact Index Per Article: 25.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Many studies over the past two decades have shown that people can use brain signals to convey their intent to a computer using brain-computer interfaces (BCIs). BCI systems extract specific features of brain activity and translate them into control signals that drive an output. Recently, a category of BCIs that are built on the rhythmic activity recorded over the sensorimotor cortex, i.e., the sensorimotor rhythm (SMR), has attracted considerable attention among the BCIs that use noninvasive neural recordings, e.g., electroencephalography (EEG), and have demonstrated the capability of multidimensional prosthesis control. This paper reviews the current state and future perspectives of SMR-based BCI and its clinical applications, in particular focusing on the EEG SMR. The characteristic features of SMR from the human brain are described and their underlying neural sources are discussed. The functional components of SMR-based BCI, together with its current clinical applications, are reviewed. Finally, limitations of SMR-BCIs and future outlooks are also discussed.
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155
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A feasibility study of an improved procedure for using EEG to detect brain responses to imagery instruction in patients with disorders of consciousness. PLoS One 2014; 9:e99289. [PMID: 24915148 PMCID: PMC4051659 DOI: 10.1371/journal.pone.0099289] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2013] [Accepted: 05/13/2014] [Indexed: 12/04/2022] Open
Abstract
One of the major concerns of recent studies is the correct discrimination between vegetative and minimally conscious state as the distinction between these two conditions has major implications for subsequent patient rehabilitation. In particular, it would be advantageous to establish communication with these patients. This work describes a procedure using EEG to detect brain responses to imagery instruction in patients with disorders of consciousness. Five healthy subjects and five patients with different disorders of consciousness took part in the study. A support vector machine classifier applied to EEG data was used to distinguish two mental tasks (Imagery Trial) and to detect answers to simple yes or no questions (pre-Communication Trial). The proposed procedure uses feature selection based on a nested-leave-one-out algorithm to reduce the number of electrodes required. We obtained a mean classification accuracy of 82.0% (SD 5.1%) for healthy subjects and 84.6% (SD 9.1%) for patients in the Imagery Trial, and a mean classification accuracy of 80.7% (SD 11.5%) for healthy subjects and 91.7% (SD 7.4%) for patients in the pre-Communication Trial. The subset of electrodes selected was subject and session dependent.
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156
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Tang Y, Wodlinger B, Durand DM. Bayesian spatial filters for source signal extraction: a study in the peripheral nerve. IEEE Trans Neural Syst Rehabil Eng 2014; 22:302-11. [PMID: 24608686 PMCID: PMC4383398 DOI: 10.1109/tnsre.2014.2303472] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The ability to extract physiological source signals to control various prosthetics offer tremendous therapeutic potential to improve the quality of life for patients suffering from motor disabilities. Regardless of the modality, recordings of physiological source signals are contaminated with noise and interference along with crosstalk between the sources. These impediments render the task of isolating potential physiological source signals for control difficult. In this paper, a novel Bayesian Source Filter for signal Extraction (BSFE) algorithm for extracting physiological source signals for control is presented. The BSFE algorithm is based on the source localization method Champagne and constructs spatial filters using Bayesian methods that simultaneously maximize the signal to noise ratio of the recovered source signal of interest while minimizing crosstalk interference between sources. When evaluated over peripheral nerve recordings obtained in vivo, the algorithm achieved the highest signal to noise interference ratio ( 7.00 ±3.45 dB) amongst the group of methodologies compared with average correlation between the extracted source signal and the original source signal R = 0.93. The results support the efficacy of the BSFE algorithm for extracting source signals from the peripheral nerve.
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157
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Leamy DJ, Kocijan J, Domijan K, Duffin J, Roche RA, Commins S, Collins R, Ward TE. An exploration of EEG features during recovery following stroke - implications for BCI-mediated neurorehabilitation therapy. J Neuroeng Rehabil 2014; 11:9. [PMID: 24468185 PMCID: PMC3996183 DOI: 10.1186/1743-0003-11-9] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2013] [Accepted: 01/03/2014] [Indexed: 11/27/2022] Open
Abstract
Background Brain-Computer Interfaces (BCI) can potentially be used to aid in the recovery of lost motor control in a limb following stroke. BCIs are typically used by subjects with no damage to the brain therefore relatively little is known about the technical requirements for the design of a rehabilitative BCI for stroke. Methods 32-channel electroencephalogram (EEG) was recorded during a finger-tapping task from 10 healthy subjects for one session and 5 stroke patients for two sessions approximately 6 months apart. An off-line BCI design based on Filter Bank Common Spatial Patterns (FBCSP) was implemented to test and compare the efficacy and accuracy of training a rehabilitative BCI with both stroke-affected and healthy data. Results Stroke-affected EEG datasets have lower 10-fold cross validation results than healthy EEG datasets. When training a BCI with healthy EEG, average classification accuracy of stroke-affected EEG is lower than the average for healthy EEG. Classification accuracy of the late session stroke EEG is improved by training the BCI on the corresponding early stroke EEG dataset. Conclusions This exploratory study illustrates that stroke and the accompanying neuroplastic changes associated with the recovery process can cause significant inter-subject changes in the EEG features suitable for mapping as part of a neurofeedback therapy, even when individuals have scored largely similar with conventional behavioural measures. It appears such measures can mask this individual variability in cortical reorganization. Consequently we believe motor retraining BCI should initially be tailored to individual patients.
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Affiliation(s)
- Darren J Leamy
- National University of Ireland Maynooth, Maynooth, Co,, Kildare, Ireland.
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158
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Real-Time Subject-Dependent EEG-Based Emotion Recognition Algorithm. TRANSACTIONS ON COMPUTATIONAL SCIENCE XXIII 2014. [DOI: 10.1007/978-3-662-43790-2_11] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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159
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Mutual information-based optimization of sparse spatio-spectral filters in brain–computer interface. Neural Comput Appl 2013. [DOI: 10.1007/s00521-013-1523-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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160
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He L, Hu Y, Li Y, Li D. Channel selection by Rayleigh coefficient maximization based genetic algorithm for classifying single-trial motor imagery EEG. Neurocomputing 2013. [DOI: 10.1016/j.neucom.2013.05.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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161
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Fattahi D, Nasihatkon B, Boostani R. A general framework to estimate spatial and spatio-spectral filters for EEG signal classification. Neurocomputing 2013. [DOI: 10.1016/j.neucom.2013.03.044] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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162
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Wang L, Zhang X, Zhong X, Zhang Y. Analysis and classification of speech imagery EEG for BCI. Biomed Signal Process Control 2013. [DOI: 10.1016/j.bspc.2013.07.011] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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163
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Li X, Zhang H, Guan C, Ong SH, Ang KK, Pan Y. Discriminative Learning of Propagation and Spatial Pattern for Motor Imagery EEG Analysis. Neural Comput 2013; 25:2709-33. [DOI: 10.1162/neco_a_00500] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Effective learning and recovery of relevant source brain activity patterns is a major challenge to brain-computer interface using scalp EEG. Various spatial filtering solutions have been developed. Most current methods estimate an instantaneous demixing with the assumption of uncorrelatedness of the source signals. However, recent evidence in neuroscience suggests that multiple brain regions cooperate, especially during motor imagery, a major modality of brain activity for brain-computer interface. In this sense, methods that assume uncorrelatedness of the sources become inaccurate. Therefore, we are promoting a new methodology that considers both volume conduction effect and signal propagation between multiple brain regions. Specifically, we propose a novel discriminative algorithm for joint learning of propagation and spatial pattern with an iterative optimization solution. To validate the new methodology, we conduct experiments involving 16 healthy subjects and perform numerical analysis of the proposed algorithm for EEG classification in motor imagery brain-computer interface. Results from extensive analysis validate the effectiveness of the new methodology with high statistical significance.
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Affiliation(s)
- Xinyang Li
- NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore 119613
| | - Haihong Zhang
- Institute for Infocomm Research, A*STAR, Singapore 138632
| | - Cuntai Guan
- Institute for Infocomm Research, A*STAR, Singapore 138632
| | - Sim Heng Ong
- Department of Electrical and Computer Engineering and Department of Bioengineering, National University of Singapore 119613
| | - Kai Keng Ang
- Institute for Infocomm Research, A*STAR, Singapore 138632
| | - Yaozhang Pan
- Institute for Infocomm Research, A*STAR, Singapore 138632
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164
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Feess D, Krell MM, Metzen JH. Comparison of sensor selection mechanisms for an ERP-based brain-computer interface. PLoS One 2013; 8:e67543. [PMID: 23844021 PMCID: PMC3699630 DOI: 10.1371/journal.pone.0067543] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2013] [Accepted: 05/20/2013] [Indexed: 11/19/2022] Open
Abstract
A major barrier for a broad applicability of brain-computer interfaces (BCIs) based on electroencephalography (EEG) is the large number of EEG sensor electrodes typically used. The necessity for this results from the fact that the relevant information for the BCI is often spread over the scalp in complex patterns that differ depending on subjects and application scenarios. Recently, a number of methods have been proposed to determine an individual optimal sensor selection. These methods have, however, rarely been compared against each other or against any type of baseline. In this paper, we review several selection approaches and propose one additional selection criterion based on the evaluation of the performance of a BCI system using a reduced set of sensors. We evaluate the methods in the context of a passive BCI system that is designed to detect a P300 event-related potential and compare the performance of the methods against randomly generated sensor constellations. For a realistic estimation of the reduced system's performance we transfer sensor constellations found on one experimental session to a different session for evaluation. We identified notable (and unanticipated) differences among the methods and could demonstrate that the best method in our setup is able to reduce the required number of sensors considerably. Though our application focuses on EEG data, all presented algorithms and evaluation schemes can be transferred to any binary classification task on sensor arrays.
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Affiliation(s)
- David Feess
- Robotics Innovation Center, German Research Center for Artificial Intelligence, Bremen, Germany
| | - Mario M. Krell
- Robotics Research Group, University of Bremen, Bremen, Germany
- * E-mail:
| | - Jan H. Metzen
- Robotics Research Group, University of Bremen, Bremen, Germany
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165
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Thompson DE, Blain-Moraes S, Huggins JE. Performance assessment in brain-computer interface-based augmentative and alternative communication. Biomed Eng Online 2013; 12:43. [PMID: 23680020 PMCID: PMC3662584 DOI: 10.1186/1475-925x-12-43] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2012] [Accepted: 04/17/2013] [Indexed: 11/14/2022] Open
Abstract
A large number of incommensurable metrics are currently used to report the performance of brain-computer interfaces (BCI) used for augmentative and alterative communication (AAC). The lack of standard metrics precludes the comparison of different BCI-based AAC systems, hindering rapid growth and development of this technology. This paper presents a review of the metrics that have been used to report performance of BCIs used for AAC from January 2005 to January 2012. We distinguish between Level 1 metrics used to report performance at the output of the BCI Control Module, which translates brain signals into logical control output, and Level 2 metrics at the Selection Enhancement Module, which translates logical control to semantic control. We recommend that: (1) the commensurate metrics Mutual Information or Information Transfer Rate (ITR) be used to report Level 1 BCI performance, as these metrics represent information throughput, which is of interest in BCIs for AAC; 2) the BCI-Utility metric be used to report Level 2 BCI performance, as it is capable of handling all current methods of improving BCI performance; (3) these metrics should be supplemented by information specific to each unique BCI configuration; and (4) studies involving Selection Enhancement Modules should report performance at both Level 1 and Level 2 in the BCI system. Following these recommendations will enable efficient comparison between both BCI Control and Selection Enhancement Modules, accelerating research and development of BCI-based AAC systems.
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Affiliation(s)
- David E Thompson
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA
| | - Stefanie Blain-Moraes
- Department of Physical Medicine and Rehabilitation, University of Michigan, Ann Arbor, MI, USA
| | - Jane E Huggins
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA
- Department of Physical Medicine and Rehabilitation, University of Michigan, Ann Arbor, MI, USA
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166
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Goksu F, Ince NF, Tewfik AH. Greedy solutions for the construction of sparse spatial and spatio-spectral filters in brain computer interface applications. Neurocomputing 2013. [DOI: 10.1016/j.neucom.2012.12.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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167
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Sparse spatial filter via a novel objective function minimization with smooth ℓ1 regularization. Biomed Signal Process Control 2013. [DOI: 10.1016/j.bspc.2012.10.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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168
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Arvaneh M, Guan C, Ang KK, Quek C. Optimizing spatial filters by minimizing within-class dissimilarities in electroencephalogram-based brain-computer interface. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2013; 24:610-619. [PMID: 24808381 DOI: 10.1109/tnnls.2013.2239310] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
A major challenge in electroencephalogram (EEG)-based brain-computer interfaces (BCIs) is the inherent nonstationarities in the EEG data. Variations of the signal properties from intra and inter sessions often lead to deteriorated BCI performances, as features extracted by methods such as common spatial patterns (CSP) are not invariant against the changes. To extract features that are robust and invariant, this paper proposes a novel spatial filtering algorithm called Kullback-Leibler (KL) CSP. The CSP algorithm only considers the discrimination between the means of the classes, but does not consider within-class scatters information. In contrast, the proposed KLCSP algorithm simultaneously maximizes the discrimination between the class means, and minimizes the within-class dissimilarities measured by a loss function based on the KL divergence. The performance of the proposed KLCSP algorithm is compared against two existing algorithms, CSP and stationary CSP (sCSP), using the publicly available BCI competition III dataset IVa and a large dataset from stroke patients performing neuro-rehabilitation. The results show that the proposed KLCSP algorithm significantly outperforms both the CSP and the sCSP algorithms, in terms of classification accuracy, by reducing within-class variations. This results in more compact and separable features.
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169
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Optimizing spatial spectral patterns jointly with channel configuration for brain–computer interface. Neurocomputing 2013. [DOI: 10.1016/j.neucom.2012.11.004] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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170
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Wang D, Miao D, Blohm G. Multi-class motor imagery EEG decoding for brain-computer interfaces. Front Neurosci 2012; 6:151. [PMID: 23087607 PMCID: PMC3466781 DOI: 10.3389/fnins.2012.00151] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2012] [Accepted: 09/19/2012] [Indexed: 11/19/2022] Open
Abstract
Recent studies show that scalp electroencephalography (EEG) as a non-invasive interface has great potential for brain-computer interfaces (BCIs). However, one factor that has limited practical applications for EEG-based BCI so far is the difficulty to decode brain signals in a reliable and efficient way. This paper proposes a new robust processing framework for decoding of multi-class motor imagery (MI) that is based on five main processing steps. (i) Raw EEG segmentation without the need of visual artifact inspection. (ii) Considering that EEG recordings are often contaminated not just by electrooculography (EOG) but also other types of artifacts, we propose to first implement an automatic artifact correction method that combines regression analysis with independent component analysis for recovering the original source signals. (iii) The significant difference between frequency components based on event-related (de-) synchronization and sample entropy is then used to find non-contiguous discriminating rhythms. After spectral filtering using the discriminating rhythms, a channel selection algorithm is used to select only relevant channels. (iv) Feature vectors are extracted based on the inter-class diversity and time-varying dynamic characteristics of the signals. (v) Finally, a support vector machine is employed for four-class classification. We tested our proposed algorithm on experimental data that was obtained from dataset 2a of BCI competition IV (2008). The overall four-class kappa values (between 0.41 and 0.80) were comparable to other models but without requiring any artifact-contaminated trial removal. The performance showed that multi-class MI tasks can be reliably discriminated using artifact-contaminated EEG recordings from a few channels. This may be a promising avenue for online robust EEG-based BCI applications.
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Affiliation(s)
- Deng Wang
- Department of Computer Science and Technology, Tongji University Shanghai, China ; Key Laboratory of Embedded System and Service Computing, Ministry of Education Shanghai, China ; Centre for Neuroscience Studies, Queen's University Kingston, ON, Canada
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171
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Wang H, Xu D. Comprehensive Common Spatial Patterns With Temporal Structure Information of EEG Data: Minimizing Nontask Related EEG Component. IEEE Trans Biomed Eng 2012; 59:2496-505. [DOI: 10.1109/tbme.2012.2205383] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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172
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Harmonic Mean of Kullback–Leibler Divergences for Optimizing Multi-Class EEG Spatio-Temporal Filters. Neural Process Lett 2012. [DOI: 10.1007/s11063-012-9228-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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173
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