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For: Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KEM, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 2002;298:2157-67. [PMID: 12481130 DOI: 10.1126/science.1080049] [Citation(s) in RCA: 1202] [Impact Index Per Article: 52.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Number Cited by Other Article(s)
201
Pasquali CC, Islam Z, Adamoski D, Ferreira IM, Righeto RD, Bettini J, Portugal RV, Yue WWY, Gonzalez A, Dias SMG, Ambrosio ALB. The origin and evolution of human glutaminases and their atypical C-terminal ankyrin repeats. J Biol Chem 2017;292:11572-11585. [PMID: 28526749 DOI: 10.1074/jbc.m117.787291] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Revised: 05/11/2017] [Indexed: 12/14/2022]  Open
202
Asymmetrically reduced expression of hand1 homeologs involving a single nucleotide substitution in a cis -regulatory element. Dev Biol 2017;425:152-160. [DOI: 10.1016/j.ydbio.2017.03.021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2016] [Revised: 03/21/2017] [Accepted: 03/21/2017] [Indexed: 01/28/2023]
203
Gerdol M, Venier P, Edomi P, Pallavicini A. Diversity and evolution of TIR-domain-containing proteins in bivalves and Metazoa: New insights from comparative genomics. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY 2017;70:145-164. [PMID: 28109746 DOI: 10.1016/j.dci.2017.01.014] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Revised: 01/13/2017] [Accepted: 01/17/2017] [Indexed: 06/06/2023]
204
Spina EJ, Guzman E, Zhou H, Kosik KS, Smith WC. A microRNA-mRNA expression network during oral siphon regeneration in Ciona. Development 2017;144:1787-1797. [PMID: 28432214 DOI: 10.1242/dev.144097] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2016] [Accepted: 04/10/2017] [Indexed: 12/14/2022]
205
Wang K, Dantec C, Lemaire P, Onuma TA, Nishida H. Genome-wide survey of miRNAs and their evolutionary history in the ascidian, Halocynthia roretzi. BMC Genomics 2017;18:314. [PMID: 28427349 PMCID: PMC5399378 DOI: 10.1186/s12864-017-3707-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2016] [Accepted: 04/12/2017] [Indexed: 11/10/2022]  Open
206
Albuixech-Crespo B, López-Blanch L, Burguera D, Maeso I, Sánchez-Arrones L, Moreno-Bravo JA, Somorjai I, Pascual-Anaya J, Puelles E, Bovolenta P, Garcia-Fernàndez J, Puelles L, Irimia M, Ferran JL. Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain. PLoS Biol 2017;15:e2001573. [PMID: 28422959 PMCID: PMC5396861 DOI: 10.1371/journal.pbio.2001573] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Accepted: 03/22/2017] [Indexed: 11/25/2022]  Open
207
Inoue J, Yasuoka Y, Takahashi H, Satoh N. The chordate ancestor possessed a single copy of the Brachyury gene for notochord acquisition. ZOOLOGICAL LETTERS 2017;3:4. [PMID: 28344820 PMCID: PMC5363035 DOI: 10.1186/s40851-017-0064-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2016] [Accepted: 02/22/2017] [Indexed: 06/06/2023]
208
Nurk S, Meleshko D, Korobeynikov A, Pevzner PA. metaSPAdes: a new versatile metagenomic assembler. Genome Res 2017;27:824-834. [PMID: 28298430 PMCID: PMC5411777 DOI: 10.1101/gr.213959.116] [Citation(s) in RCA: 2474] [Impact Index Per Article: 309.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2016] [Accepted: 03/13/2017] [Indexed: 01/25/2023]
209
Epigenetic divergence of key genes associated with water temperature and salinity in a highly invasive model ascidian. Biol Invasions 2017. [DOI: 10.1007/s10530-017-1409-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
210
Conservation of the Keap1-Nrf2 System: An Evolutionary Journey through Stressful Space and Time. Molecules 2017;22:molecules22030436. [PMID: 28282941 PMCID: PMC6155405 DOI: 10.3390/molecules22030436] [Citation(s) in RCA: 117] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2017] [Revised: 03/04/2017] [Accepted: 03/06/2017] [Indexed: 12/30/2022]  Open
211
Lin Y, Chen Y, Yi C, Fong JJ, Kim W, Rius M, Zhan A. Genetic signatures of natural selection in a model invasive ascidian. Sci Rep 2017;7:44080. [PMID: 28266616 PMCID: PMC5339779 DOI: 10.1038/srep44080] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 02/02/2017] [Indexed: 12/26/2022]  Open
212
Hahn ME, Karchner SI, Merson RR. Diversity as Opportunity: Insights from 600 Million Years of AHR Evolution. CURRENT OPINION IN TOXICOLOGY 2017;2:58-71. [PMID: 28286876 DOI: 10.1016/j.cotox.2017.02.003] [Citation(s) in RCA: 97] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
213
Salvador-Martínez I, Salazar-Ciudad I. How complexity increases in development: An analysis of the spatial-temporal dynamics of Gene expression in Ciona intestinalis. Mech Dev 2017;144:113-124. [PMID: 28189795 DOI: 10.1016/j.mod.2017.02.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2015] [Revised: 02/04/2017] [Accepted: 02/06/2017] [Indexed: 12/11/2022]
214
Zafrir Z, Tuller T. Unsupervised detection of regulatory gene expression information in different genomic regions enables gene expression ranking. BMC Bioinformatics 2017;18:77. [PMID: 28143396 PMCID: PMC5286865 DOI: 10.1186/s12859-017-1497-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2016] [Accepted: 01/27/2017] [Indexed: 12/30/2022]  Open
215
Carmona LM, Schatz DG. New insights into the evolutionary origins of the recombination-activating gene proteins and V(D)J recombination. FEBS J 2017;284:1590-1605. [PMID: 27973733 PMCID: PMC5459667 DOI: 10.1111/febs.13990] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2016] [Revised: 11/10/2016] [Accepted: 12/08/2016] [Indexed: 12/26/2022]
216
Kawada T, Shiraishi A, Aoyama M, Satake H. Transcriptomes of the Premature and Mature Ovaries of an Ascidian, Ciona intestinalis. Front Endocrinol (Lausanne) 2017;8:88. [PMID: 28484427 PMCID: PMC5402223 DOI: 10.3389/fendo.2017.00088] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/22/2016] [Accepted: 04/05/2017] [Indexed: 01/26/2023]  Open
217
Yagi H. Development and Application of Glycosylation-Profiling Techniques for Functional Glycomics in the Nervous System. TRENDS GLYCOSCI GLYC 2017. [DOI: 10.4052/tigg.1614.2e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
218
Yagi H. Development and Application of Glycosylation-Profiling Techniques for Functional Glycomics in the Nervous System. TRENDS GLYCOSCI GLYC 2017. [DOI: 10.4052/tigg.1614.2j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
219
Kojima H, Shinohara R, Itonori S, Ito M. Characterization of a Novel Rhamnose-containing Acidic Glycosphingolipid from the Ascidian Halocynthia aurantium. J Oleo Sci 2017;66:285-295. [DOI: 10.5650/jos.ess16150] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
220
Kusakabe TG. Identifying Vertebrate Brain Prototypes in Deuterostomes. DIVERSITY AND COMMONALITY IN ANIMALS 2017. [DOI: 10.1007/978-4-431-56469-0_7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
221
Sasakura Y, Yoshida K, Treen N. Genome Editing of the Ascidian Ciona intestinalis with TALE Nuclease. Methods Mol Biol 2017. [PMID: 28643263 DOI: 10.1007/978-1-4939-7128-2_19] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
222
Sasakura Y, Ogura Y, Treen N, Yokomori R, Park SJ, Nakai K, Saiga H, Sakuma T, Yamamoto T, Fujiwara S, Yoshida K. Transcriptional regulation of a horizontally transferred gene from bacterium to chordate. Proc Biol Sci 2016;283:20161712. [PMID: 28003446 PMCID: PMC5204163 DOI: 10.1098/rspb.2016.1712] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2016] [Accepted: 11/15/2016] [Indexed: 01/21/2023]  Open
223
Kollitz EM, Zhang G, Hawkins MB, Whitfield GK, Reif DM, Kullman SW. Evolutionary and Functional Diversification of the Vitamin D Receptor-Lithocholic Acid Partnership. PLoS One 2016;11:e0168278. [PMID: 27942020 PMCID: PMC5152921 DOI: 10.1371/journal.pone.0168278] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Accepted: 11/28/2016] [Indexed: 01/14/2023]  Open
224
Ryan K, Lu Z, Meinertzhagen IA. The CNS connectome of a tadpole larva of Ciona intestinalis (L.) highlights sidedness in the brain of a chordate sibling. eLife 2016;5. [PMID: 27921996 PMCID: PMC5140270 DOI: 10.7554/elife.16962] [Citation(s) in RCA: 164] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 10/17/2016] [Indexed: 12/12/2022]  Open
225
PG BL, AE M, RJ O, PH W, A B. Transcriptomic profiles of spring and summer populations of the Southern Ocean salp, Salpa thompsoni, in the Western Antarctic Peninsula region. Polar Biol 2016. [DOI: 10.1007/s00300-016-2051-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
226
Mayorova TD, Tian S, Cai W, Semmens DC, Odekunle EA, Zandawala M, Badi Y, Rowe ML, Egertová M, Elphick MR. Localization of Neuropeptide Gene Expression in Larvae of an Echinoderm, the Starfish Asterias rubens. Front Neurosci 2016;10:553. [PMID: 27990106 PMCID: PMC5130983 DOI: 10.3389/fnins.2016.00553] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2016] [Accepted: 11/16/2016] [Indexed: 11/13/2022]  Open
227
Pogson GH. Studying the genetic basis of speciation in high gene flow marine invertebrates. Curr Zool 2016;62:643-653. [PMID: 29491951 PMCID: PMC5804258 DOI: 10.1093/cz/zow093] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Accepted: 08/16/2016] [Indexed: 12/18/2022]  Open
228
Jue NK, Batta-Lona PG, Trusiak S, Obergfell C, Bucklin A, O'Neill MJ, O'Neill RJ. Rapid Evolutionary Rates and Unique Genomic Signatures Discovered in the First Reference Genome for the Southern Ocean Salp, Salpa thompsoni (Urochordata, Thaliacea). Genome Biol Evol 2016;8:3171-3186. [PMID: 27624472 PMCID: PMC5174732 DOI: 10.1093/gbe/evw215] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
229
Kari W, Zeng F, Zitzelsberger L, Will J, Rothbächer U. Embryo Microinjection and Electroporation in the Chordate Ciona intestinalis. J Vis Exp 2016. [PMID: 27805579 PMCID: PMC5092207 DOI: 10.3791/54313] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
230
Bouchemousse S, Liautard-Haag C, Bierne N, Viard F. Distinguishing contemporary hybridization from past introgression with postgenomic ancestry-informative SNPs in strongly differentiated Ciona species. Mol Ecol 2016;25:5527-5542. [PMID: 27662427 DOI: 10.1111/mec.13854] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Revised: 09/09/2016] [Accepted: 09/16/2016] [Indexed: 12/13/2022]
231
Tai A, Cheung M, Huang YH, Jauch R, Bronner ME, Cheah KSE. SOXE neofunctionalization and elaboration of the neural crest during chordate evolution. Sci Rep 2016;6:34964. [PMID: 27734831 PMCID: PMC5062122 DOI: 10.1038/srep34964] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2016] [Accepted: 09/15/2016] [Indexed: 12/27/2022]  Open
232
Di Gregorio A. T-Box Genes and Developmental Gene Regulatory Networks in Ascidians. Curr Top Dev Biol 2016;122:55-91. [PMID: 28057272 DOI: 10.1016/bs.ctdb.2016.08.007] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
233
Imai KS, Hudson C, Oda-Ishii I, Yasuo H, Satou Y. Antagonism between β-catenin and Gata.a sequentially segregates the germ layers of ascidian embryos. Development 2016;143:4167-4172. [PMID: 27707797 DOI: 10.1242/dev.141481] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Accepted: 09/22/2016] [Indexed: 12/30/2022]
234
The Ciona intestinalis cleavage clock is independent of DNA methylation. Genomics 2016;108:168-176. [DOI: 10.1016/j.ygeno.2016.10.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Revised: 09/01/2016] [Accepted: 10/02/2016] [Indexed: 11/20/2022]
235
Segade F, Cota C, Famiglietti A, Cha A, Davidson B. Fibronectin contributes to notochord intercalation in the invertebrate chordate, Ciona intestinalis. EvoDevo 2016;7:21. [PMID: 27583126 PMCID: PMC5006582 DOI: 10.1186/s13227-016-0056-4] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2016] [Accepted: 08/13/2016] [Indexed: 12/24/2022]  Open
236
Velandia-Huerto CA, Gittenberger AA, Brown FD, Stadler PF, Bermúdez-Santana CI. Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum. BMC Genomics 2016;17:691. [PMID: 27576499 PMCID: PMC5006418 DOI: 10.1186/s12864-016-2934-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2016] [Accepted: 07/12/2016] [Indexed: 01/08/2023]  Open
237
Ciona as a Simple Chordate Model for Heart Development and Regeneration. J Cardiovasc Dev Dis 2016;3. [PMID: 27642586 PMCID: PMC5023151 DOI: 10.3390/jcdd3030025] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]  Open
238
Shenkar N, Koplovitz G, Dray L, Gissi C, Huchon D. Back to solitude: Solving the phylogenetic position of the Diazonidae using molecular and developmental characters. Mol Phylogenet Evol 2016;100:51-56. [DOI: 10.1016/j.ympev.2016.04.001] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Revised: 03/27/2016] [Accepted: 04/01/2016] [Indexed: 01/13/2023]
239
Stanley EC, Azzinaro PA, Vierra DA, Howlett NG, Irvine SQ. The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia. Evol Bioinform Online 2016;12:133-48. [PMID: 27279728 PMCID: PMC4898443 DOI: 10.4137/ebo.s37920] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2015] [Revised: 02/10/2016] [Accepted: 02/16/2016] [Indexed: 12/26/2022]  Open
240
Braun K, Stach T. Comparative study of serotonin-like immunoreactivity in the branchial basket, digestive tract, and nervous system in tunicates. ZOOMORPHOLOGY 2016. [DOI: 10.1007/s00435-016-0317-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
241
Actin-Induced Structure in the Beta-Thymosin Family of Intrinsically Disordered Proteins. VITAMINS AND HORMONES 2016;102:55-71. [PMID: 27450730 DOI: 10.1016/bs.vh.2016.04.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
242
Cima F, Franchi N. Histamine Stimulates Ciliary Beat Frequency via the H2 Receptor in the ProtochordateBotryllus schlosseri. JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION 2016;326:176-92. [DOI: 10.1002/jez.b.22675] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 04/04/2016] [Accepted: 04/11/2016] [Indexed: 11/12/2022]
243
Evolution by gene loss. Nat Rev Genet 2016;17:379-91. [PMID: 27087500 DOI: 10.1038/nrg.2016.39] [Citation(s) in RCA: 464] [Impact Index Per Article: 51.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
244
Gökirmak T, Campanale JP, Reitzel AM, Shipp LE, Moy GW, Hamdoun A. Functional diversification of sea urchin ABCC1 (MRP1) by alternative splicing. Am J Physiol Cell Physiol 2016;310:C911-20. [PMID: 27053522 DOI: 10.1152/ajpcell.00029.2016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Accepted: 04/01/2016] [Indexed: 11/22/2022]
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Canapa A, Barucca M, Biscotti MA, Forconi M, Olmo E. Transposons, Genome Size, and Evolutionary Insights in Animals. Cytogenet Genome Res 2016;147:217-39. [PMID: 26967166 DOI: 10.1159/000444429] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/03/2015] [Indexed: 11/19/2022]  Open
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Lemaire P, Piette J. Tunicates: exploring the sea shores and roaming the open ocean. A tribute to Thomas Huxley. Open Biol 2016;5:150053. [PMID: 26085517 PMCID: PMC4632506 DOI: 10.1098/rsob.150053] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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Genome-Wide Identification and Transcriptome-Based Expression Profiling of the Sox Gene Family in the Nile Tilapia (Oreochromis niloticus). Int J Mol Sci 2016;17:270. [PMID: 26907269 PMCID: PMC4813134 DOI: 10.3390/ijms17030270] [Citation(s) in RCA: 56] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Revised: 02/06/2016] [Accepted: 02/15/2016] [Indexed: 11/16/2022]  Open
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Gut immunity in a protochordate involves a secreted immunoglobulin-type mediator binding host chitin and bacteria. Nat Commun 2016;7:10617. [PMID: 26875669 PMCID: PMC4757023 DOI: 10.1038/ncomms10617] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Accepted: 01/05/2016] [Indexed: 12/23/2022]  Open
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The phylogeny, evolutionary developmental biology, and paleobiology of the Deuterostomia: 25 years of new techniques, new discoveries, and new ideas. ORG DIVERS EVOL 2016. [DOI: 10.1007/s13127-016-0270-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Mier P, Andrade-Navarro MA. FastaHerder2: Four Ways to Research Protein Function and Evolution with Clustering and Clustered Databases. J Comput Biol 2016;23:270-8. [PMID: 26828375 DOI: 10.1089/cmb.2015.0191] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]  Open
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