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For: Wang XF, Tang JY, Sun J, Dorje S, Sun TQ, Peng B, Ji XW, Li Z, Zhang XE, Wang DB. ProT-Diff: A Modularized and Efficient Strategy for De Novo Generation of Antimicrobial Peptide Sequences by Integrating Protein Language and Diffusion Models. Adv Sci (Weinh) 2024;11:e2406305. [PMID: 39319609 DOI: 10.1002/advs.202406305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Revised: 09/08/2024] [Indexed: 09/26/2024]
Number Cited by Other Article(s)
1
Luo Z, Geng A, Wei L, Zou Q, Cui F, Zhang Z. CPL-Diff: A Diffusion Model for De Novo Design of Functional Peptide Sequences with Fixed Length. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2025;12:e2412926. [PMID: 40231709 PMCID: PMC12120732 DOI: 10.1002/advs.202412926] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Revised: 03/13/2025] [Indexed: 04/16/2025]
2
Yin K, Li R, Zhang S, Sun Y, Huang L, Jiang M, Xu D, Xu W. Deep Learning Combined with Quantitative Structure‒Activity Relationship Accelerates De Novo Design of Antifungal Peptides. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2025;12:e2412488. [PMID: 39921483 PMCID: PMC11967820 DOI: 10.1002/advs.202412488] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2024] [Revised: 01/20/2025] [Indexed: 02/10/2025]
3
Zhou X, Liu G, Cao S, Lv J. Deep Learning for Antimicrobial Peptides: Computational Models and Databases. J Chem Inf Model 2025;65:1708-1717. [PMID: 39927895 DOI: 10.1021/acs.jcim.5c00006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/11/2025]
4
Guan C, Fernandes FC, Franco OL, de la Fuente-Nunez C. Leveraging large language models for peptide antibiotic design. CELL REPORTS. PHYSICAL SCIENCE 2025;6:102359. [PMID: 39949833 PMCID: PMC11823563 DOI: 10.1016/j.xcrp.2024.102359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/16/2025]
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