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Płotka S, Grzeszczyk MK, Brawura-Biskupski-Samaha R, Gutaj P, Lipa M, Trzciński T, Išgum I, Sánchez CI, Sitek A. BabyNet++: Fetal birth weight prediction using biometry multimodal data acquired less than 24 hours before delivery. Comput Biol Med 2023; 167:107602. [PMID: 37925906 DOI: 10.1016/j.compbiomed.2023.107602] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Revised: 09/12/2023] [Accepted: 10/17/2023] [Indexed: 11/07/2023]
Abstract
Accurate prediction of fetal weight at birth is essential for effective perinatal care, particularly in the context of antenatal management, which involves determining the timing and mode of delivery. The current standard of care involves performing a prenatal ultrasound 24 hours prior to delivery. However, this task presents challenges as it requires acquiring high-quality images, which becomes difficult during advanced pregnancy due to the lack of amniotic fluid. In this paper, we present a novel method that automatically predicts fetal birth weight by using fetal ultrasound video scans and clinical data. Our proposed method is based on a Transformer-based approach that combines a Residual Transformer Module with a Dynamic Affine Feature Map Transform. This method leverages tabular clinical data to evaluate 2D+t spatio-temporal features in fetal ultrasound video scans. Development and evaluation were carried out on a clinical set comprising 582 2D fetal ultrasound videos and clinical records of pregnancies from 194 patients performed less than 24 hours before delivery. Our results show that our method outperforms several state-of-the-art automatic methods and estimates fetal birth weight with an accuracy comparable to human experts. Hence, automatic measurements obtained by our method can reduce the risk of errors inherent in manual measurements. Observer studies suggest that our approach may be used as an aid for less experienced clinicians to predict fetal birth weight before delivery, optimizing perinatal care regardless of the available expertise.
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Affiliation(s)
- Szymon Płotka
- Sano Centre for Computational Medicine, Cracow, Poland; Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands; Department of Biomedical Engineering and Physics, Amsterdam University Medical Center, Amsterdam, The Netherlands.
| | | | | | - Paweł Gutaj
- Department of Reproduction, Poznan University of Medical Sciences, Poznan, Poznan, Poland
| | - Michał Lipa
- First Department of Obstetrics and Gynecology, Medical University of Warsaw, Warsaw, Poland
| | - Tomasz Trzciński
- Institute of Computer Science, Warsaw University of Technology, Warsaw, Poland
| | - Ivana Išgum
- Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands; Department of Biomedical Engineering and Physics, Amsterdam University Medical Center, Amsterdam, The Netherlands; Department of Radiology and Nuclear Medicine, Amsterdam University Medical Center, location University of Amsterdam, Amsterdam, The Netherlands
| | - Clara I Sánchez
- Informatics Institute, University of Amsterdam, Amsterdam, The Netherlands; Department of Biomedical Engineering and Physics, Amsterdam University Medical Center, Amsterdam, The Netherlands
| | - Arkadiusz Sitek
- Center for Advanced Medical Computing and Simulation, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA
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Mengistu YG, Hailemariam D, Roro MA, Endris BS, Tesfamariam K, Gebreyesus SH. Intrauterine growth pattern in Butajira HDSS, Southern Ethiopia: BUNMAP pregnancy cohort. BMC Pediatr 2023; 23:422. [PMID: 37620778 PMCID: PMC10464298 DOI: 10.1186/s12887-023-04244-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 08/11/2023] [Indexed: 08/26/2023] Open
Abstract
BACKGROUND Abnormal fetal growth pattern during pregnancy including excessive fetal size and intrauterine growth restrictions are the major determinants for perinatal outcomes and postnatal growth. Ultrasonography is a useful tool in monitoring fetal growth for appropriate care and interventions. However, there are few longitudinal studies using serial ultrasonography in low and middle-income countries. Moreover, the reference charts used for fetal growth monitoring in low-income countries comes from high income countries with distinct population features. Therefore, the purpose of this study was to evaluate the intrauterine growth pattern of the fetus using serial ultrasonography. METHODS We conducted a prospective community-based cohort study from March 2018 to December 2019. Pregnant women with gestational age of 24 weeks or below living in the Butajira HDSS were enrolled. We followed the pregnant women until delivery. Serial ultrasound measurements were taken, and fetal weight was estimated using the Hadlock algorithm based on biparietal diameter, head circumference, abdominal circumference, and femur length. The z-scores and percentiles of biometric measurements were calculated and compared to the INTERGROWTH-21st International Standards for Fetal Growth. RESULTS We reviewed a total of 2055 ultrasound scans and 746 women who fulfill the inclusion criteria were involved". We found similar distribution patterns of biometric measurements and estimated fetal weight compared to the previous study done in Ethiopia, the WHO and INTERGROWTH-21st references. In our study, the 5th,50th and 95th percentiles of estimated fetal weight distribution have a similar pattern to the WHO and INTERGROWTH-21st charts. The 50th and 95th percentile had also a similar distribution pattern with the previous study conducted in Ethiopia. We found that 10% of the fetus were small for gestational age (below the 10th percentile) based on the Z-score of estimated fetal weight. CONCLUSION Our study evaluated the fetal growth patterns in rural community of Ethiopia using serial ultrasound biometric measurements. We found similar IUG patterns to the WHO and INTERGROWTH-21st reference standards as well as the previous study conducted in Ethiopia.
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Affiliation(s)
- Yalemwork G Mengistu
- Department of Public Health Nutrition and Dietetics, School of Public Health, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
| | - Damen Hailemariam
- Department of Health Systems Management and Health Policy, School of Public Health, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia
| | - Meselech A Roro
- Department of Reproductive, Family and Population Health, School of Public Health, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia
| | - Bilal S Endris
- Department of Public Health Nutrition and Dietetics, School of Public Health, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia
| | - Kokeb Tesfamariam
- Department of Public Health, College of Medicine and Public Health, Ambo University, Ambo, Ethiopia
| | - Seifu H Gebreyesus
- Department of Public Health Nutrition and Dietetics, School of Public Health, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia
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Hirschfeld N, Bormann E, Koester HA, Klockenbusch W, Steinhard J, Schmitz R, Kubiak K. Update Reference Charts: Fetal Biometry between the 15th and 42nd Week of Gestation. Z Geburtshilfe Neonatol 2022; 226:367-376. [PMID: 36265496 DOI: 10.1055/a-1933-6723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
OBJECTIVES This study was designed to establish new reference charts for BPD (biparietal diameter), OFD (occipitofrontal diameter), HC (head circumference), CM (cisterna magna), TCD (transverse cerebellar diameter), PCV (posterior cerebral ventricle), AC (abdominal circumference), FL (femur length), and HL (humerus length) and extend known charts to 42 weeks of gestation. These new charts were compared to studies carried out by Snijders and Nicolaides, the INTERGROWTH 21st Project, and the WHO Fetal Growth Charts. METHODS In this retrospective cross-sectional single-center study of 12,972 low-risk pregnancies, biometric data between the 15th and 42nd weeks of gestation were evaluated. Only one examination per pregnancy was selected for statistical analysis. Descriptive analysis for the 5th, 50th, and 95th quantile was performed for each parameter as listed above. Regression models were used to fit the mean and the SD at each gestational age. RESULTS Initially the reference curves for BPD, OFD, HC, AC, FL, and HL show a linear increase, which changes into a cubic increase towards the end of pregnancy. The results of this study show statistically noticeable differences from the percentile curves of the studies listed above. CONCLUSIONS The percentile curves in this study differ from the commonly used ones. The presented standard curves can be used as a reference in prenatal diagnostics.
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Affiliation(s)
- Nadja Hirschfeld
- Gynecology and Obstetrics, St Franziskus-Hospital Munster GmbH, Munster, Germany
| | - Eike Bormann
- Biostatistics and Clinical Research, University of Munster Institute of Medical Informatics, Munster, Germany
| | - Helen Ann Koester
- Gynecology and Obstetrics, Westfälische Wilhelms-Universität Münster Fachbereich 05 Medizinische Fakultät, Munster, Germany
| | | | - Johannes Steinhard
- Department of Fetal Cardiology, Heart and Diabetes Center, Bad Oeynhausen Hospital, Bad Oeynhausen, Germany
| | - Ralf Schmitz
- Gynecology and Obstetrics, Westfälische Wilhelms-Universität Münster Fachbereich 05 Medizinische Fakultät, Munster, Germany
| | - Karol Kubiak
- Gynecology and Obstetrics, St Franziskus-Hospital Munster GmbH, Munster, Germany
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Płotka S, Klasa A, Lisowska A, Seliga-Siwecka J, Lipa M, Trzciński T, Sitek A. Deep learning fetal ultrasound video model match human observers in biometric measurements. Phys Med Biol 2022; 67. [PMID: 35051921 DOI: 10.1088/1361-6560/ac4d85] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2021] [Accepted: 01/20/2022] [Indexed: 11/11/2022]
Abstract
Objective.This work investigates the use of deep convolutional neural networks (CNN) to automatically perform measurements of fetal body parts, including head circumference, biparietal diameter, abdominal circumference and femur length, and to estimate gestational age and fetal weight using fetal ultrasound videos.Approach.We developed a novel multi-task CNN-based spatio-temporal fetal US feature extraction and standard plane detection algorithm (called FUVAI) and evaluated the method on 50 freehand fetal US video scans. We compared FUVAI fetal biometric measurements with measurements made by five experienced sonographers at two time points separated by at least two weeks. Intra- and inter-observer variabilities were estimated.Main results.We found that automated fetal biometric measurements obtained by FUVAI were comparable to the measurements performed by experienced sonographers The observed differences in measurement values were within the range of inter- and intra-observer variability. Moreover, analysis has shown that these differences were not statistically significant when comparing any individual medical expert to our model.Significance.We argue that FUVAI has the potential to assist sonographers who perform fetal biometric measurements in clinical settings by providing them with suggestions regarding the best measuring frames, along with automated measurements. Moreover, FUVAI is able perform these tasks in just a few seconds, which is a huge difference compared to the average of six minutes taken by sonographers. This is significant, given the shortage of medical experts capable of interpreting fetal ultrasound images in numerous countries.
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Affiliation(s)
- Szymon Płotka
- Sano Centre for Computational Medicine, Czarnowiejska 36, 30-054 Cracow, Poland.,Faculty of Electronics and Information Technology, Warsaw University of Technology, Nowowiejska 15/19, 00-665 Warsaw, Poland.,Fetai Health Ltd., Warsaw, Poland
| | | | - Aneta Lisowska
- Sano Centre for Computational Medicine, Czarnowiejska 36, 30-054 Cracow, Poland.,Poznan University of Technology, Piotrowo 3, 60-965 Poznan, Poland
| | | | - Michał Lipa
- 1st Department of Obstetrics and Gynecology, Medical University of Warsaw, Plac Starynkiewicza 1/3, 02-015 Warsaw, Poland
| | - Tomasz Trzciński
- Faculty of Electronics and Information Technology, Warsaw University of Technology, Nowowiejska 15/19, 00-665 Warsaw, Poland.,Jagiellonian University, Prof. Stanisława Łojosiewicza 6, 30-348 Cracow, Poland
| | - Arkadiusz Sitek
- Sano Centre for Computational Medicine, Czarnowiejska 36, 30-054 Cracow, Poland
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