1
|
Aloui G, Bouabdallah S, Baltaze JP, Pucheta JEH, Touil S, Farjon J, Giraud N. Monitoring Conformational Changes in an Enzyme Conversion Inhibitor Using Pure Shift Exchange NMR Spectroscopy. Chemphyschem 2019; 20:1738-1746. [PMID: 31033157 DOI: 10.1002/cphc.201900244] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 04/25/2019] [Indexed: 11/06/2022]
Abstract
We report the acquisition of 2D NMR EXSY spectra with ultrahigh resolution, which allows for probing the slow conformational exchange process in a pharmaceutical compound. The resolution enhancement is achieved by implementing interferogram based PSYCHE homonuclear decoupling to generate a pure shift proton spectrum along the direct domain of the resulting data. The performance of this pure shift EXSY pulse sequence is compared to the standard experiment recorded under identical conditions. It is found that although being less sensitive and requiring a longer acquisition time, the quality of pure shift spectra allows for extracting exchange rates values that are coherent with the ones determined by standard approach, on a temperature range that demonstrates the robustness of the chosen homonuclear decoupling method. The resolution enhancement provided by the simplification of proton line shape allows for probing a higher number of proton sites whose analysis would have been biased using a standard method. These results open the way to a thorough and accurate study of chemical exchange processes based on a multi-site analysis of 2D pure shift EXSY spectra.
Collapse
Affiliation(s)
- G Aloui
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France.,Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - S Bouabdallah
- Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - J P Baltaze
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France
| | - J E H Pucheta
- Consejo Nacional de Ciencia y Tecnología - Laboratorio Nacional de Investigación y Servicio Agroalimentario y Forestal, Universidad Autónoma Chapingo, Km. 38.5 Carretera México-Texcoco, Chapingo, 56230, Estado de México, México
| | - S Touil
- Laboratory of Hetero-Organic Compounds and Nanostructured Materials, University of Carthage, Faculty of Sciences of Bizerte, 7021, Jarzouna, Tunisia
| | - J Farjon
- CEISAM UMR CNRS 6230, Faculté des Sciences et Techniques, 2 rue de la Houssinière, BP, 92208, 44322 Nantes cedex 3, France
| | - N Giraud
- Université Paris Saclay, Institut de Chimie Moléculaire et des Matériaux d'Orsay Equipe RMN en Milieu Orienté UMR CNRS-UPS 8182, 91405, Orsay, France.,Laboratory of Pharmacological and Toxicological Chemistry and Biochemistry, Université Paris Descartes, Sorbonne Paris Cité, 45 rue des Saints Pères, 75006, Paris, France
| |
Collapse
|
2
|
Rao Kakita VM, Joshi MV, Hosur RV. G-SERF Editing in Two-Dimensional Pure-Shift Total Correlation Spectroscopy: Scalar Coupling Measurements for a Group of Spins in Organic Molecules. Chemphyschem 2019; 20:1559-1566. [PMID: 30997947 DOI: 10.1002/cphc.201900174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2019] [Revised: 04/13/2019] [Indexed: 11/10/2022]
Abstract
A novel G-SERF-PSYCHE-TOCSY (gradient encoded selective refocusing in pure shift yielded by chirp excitation version of total correlation spectroscopy) NMR pulse scheme has been proposed, which produces TOCSY chemical shift correlations, on one hand, and scalar coupling values for the spins scalarly coupled to irradiated resonances, by showing them as doublets along the indirect dimension, on the other. Therefore, recording such an experiment, for a group of spins with overlapping chemical shifts, in organic molecules can adequately provide scalar coupling information in a G-SERF manner along the indirect dimensions, and they can be assigned to particular spin pairs. Such COSY chemical shift correlations (which appear as doublets for the scalarly coupled spins) can be readily discriminated from the TOCSY peaks (which do not show such splitting) in the G-SERF-PSYCHE-TOCSY spectrum.
Collapse
Affiliation(s)
- Veera Mohana Rao Kakita
- UM-DAE-Centre for Excellence in Basic Sciences, University of Mumbai, Kalina Campus, Santacruz, Mumbai, 400 098, India
| | - Mamata V Joshi
- Department of Chemical Sciences, Tata Institute of Fundamental Research (TIFR), 1-Homi Bhabha Road, Colaba, Mumbai, 400 005, India
| | - Ramakrishna V Hosur
- UM-DAE-Centre for Excellence in Basic Sciences, University of Mumbai, Kalina Campus, Santacruz, Mumbai, 400 098, India.,Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| |
Collapse
|
3
|
Castaing-Cordier T, Bouillaud D, Bowyer P, Gonçalves O, Giraudeau P, Farjon J. Highly Resolved Pure-Shift Spectra on a Compact NMR Spectrometer. Chemphyschem 2019; 20:736-744. [DOI: 10.1002/cphc.201801116] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2018] [Revised: 01/02/2019] [Indexed: 01/15/2023]
Affiliation(s)
- Thomas Castaing-Cordier
- CEISAM UMR CNRS 6230; Faculté des Sciences et Techniques 2 rue de la Houssinière, BP 92208; 44322 Nantes cedex 3 France
| | - Dylan Bouillaud
- CEISAM UMR CNRS 6230; Faculté des Sciences et Techniques 2 rue de la Houssinière, BP 92208; 44322 Nantes cedex 3 France
- Université de Nantes; GEPEA, UMR CNRS 6144 Bât CRTT; 37 boulevard de l'Université, BP406 44602 St Nazaire cedex France
| | - Paul Bowyer
- Magritek Inc.; 103 Great Valley Pkwy Malvern PA 19355 USA
| | - Olivier Gonçalves
- Université de Nantes; GEPEA, UMR CNRS 6144 Bât CRTT; 37 boulevard de l'Université, BP406 44602 St Nazaire cedex France
| | - Patrick Giraudeau
- CEISAM UMR CNRS 6230; Faculté des Sciences et Techniques 2 rue de la Houssinière, BP 92208; 44322 Nantes cedex 3 France
- Institut Universitaire de France; 1 rue Descartes 75005 Paris France
| | - Jonathan Farjon
- CEISAM UMR CNRS 6230; Faculté des Sciences et Techniques 2 rue de la Houssinière, BP 92208; 44322 Nantes cedex 3 France
| |
Collapse
|
4
|
Abstract
Broadband homodecoupling techniques in NMR, also known as "pure shift" methods, aim to enhance spectral resolution by suppressing the effects of homonuclear coupling interactions to turn multiplet signals into singlets. Such techniques typically work by selecting a subset of "active" nuclear spins to observe, and selectively inverting the remaining, "passive", spins to reverse the effects of coupling. Pure Shift Yielded by Chirp Excitation (PSYCHE) is one such method; it is relatively recent, but has already been successfully implemented in a range of different NMR experiments. Paradoxically, PSYCHE is one of the trickiest of pure shift NMR techniques to understand but one of the easiest to use. Here we offer some insights into theoretical and practical aspects of the method, and into the effects and importance of the experimental parameters. Some recent improvements that enhance the spectral purity of PSYCHE spectra will be presented, and some experimental frameworks, including examples in 1D and 2D NMR spectroscopy, for the implementation of PSYCHE will be introduced.
Collapse
Affiliation(s)
| | - Gareth A Morris
- School of Chemistry, University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Mathias Nilsson
- School of Chemistry, University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| |
Collapse
|
5
|
Verma A, Parihar R, Bhattacharya S, Baishya B. Analyses of Complex Mixtures by F 1 Homo-Decoupled Diagonal Suppressed Total Correlation Spectroscopy. Chemphyschem 2017; 18:3076-3082. [PMID: 28833930 DOI: 10.1002/cphc.201700662] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Revised: 07/31/2017] [Indexed: 11/07/2022]
Abstract
A diagonal suppressed F1 decoupled total correlation spectroscopy(TOCSY) experiment is developed for analyses of complex mixtures. In 2D homonuclear correlation, assignment of the cross peaks is crucial for structure elucidation. However, when cross peaks are close to the diagonal peaks in overcrowded spectral regions, their assignment becomes tedious. In complex mixtures, the presence of multiple spectra along with broad and complex proton multiplets owing to homonuclear scalar couplings degrade the resolution to the extent that assignment of various cross peaks becomes tedious or impossible. Herein, a diagonal suppressed total correlation technique with F1 decoupling is presented to improve the resolution of the cross peaks. The resolution of the cross peaks is improved by both diagonal suppression as well as the collapse of the multiplets to singlets. Application of the method to a few mixtures of organic compounds reveals better identification of the cross peaks relative to other TOCSY variants.
Collapse
Affiliation(s)
- Ajay Verma
- Centre of Biomedical Research (Formerly Centre of Biomedical Magnetic Resonance), SGPGIMS Campus, Raebareli Road, Lucknow, 226014, U. P., India.,Department of Chemistry, Institute of Science, Banaras Hindu University, Banaras, 221005, U. P., India
| | - Rashmi Parihar
- Centre of Biomedical Research (Formerly Centre of Biomedical Magnetic Resonance), SGPGIMS Campus, Raebareli Road, Lucknow, 226014, U. P., India.,Department of Bioinformatics, Dr. A. P. J. Abdul Kalam Technical University, Lucknow, 226021, U. P., India
| | - Subrato Bhattacharya
- Department of Chemistry, Institute of Science, Banaras Hindu University, Banaras, 221005, U. P., India
| | - Bikash Baishya
- Centre of Biomedical Research (Formerly Centre of Biomedical Magnetic Resonance), SGPGIMS Campus, Raebareli Road, Lucknow, 226014, U. P., India
| |
Collapse
|
6
|
Ndukwe IE, Shchukina A, Zorin V, Cobas C, Kazimierczuk K, Butts CP. Enabling Fast Pseudo-2D NMR Spectral Acquisition for Broadband Homonuclear Decoupling: The EXACT NMR Approach. Chemphyschem 2017; 18:2081-2087. [DOI: 10.1002/cphc.201700474] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Indexed: 11/07/2022]
Affiliation(s)
- Ikenna E. Ndukwe
- Department of Chemistry; University of Bristol; Cantocks Close Bristol. BS8 1TS UK
- Department of Pure and Industrial Chemistry; Abia State University; Uturu PMB 2000. Abia State Nigeria
| | - Alexandra Shchukina
- Centre of New Technologies; University of Warsaw; Banacha 2C 02089 Warszawa Poland
- Institute for Spectroscopy; Russian Academy of Sciences; Fizicheskaya 5 142190, Moscow Troitsk Russia
| | - Vadim Zorin
- Mestrelab Research S.L.; Feliciano Barrera 9B-Bajo 15706 Santiago de Compostela Spain
| | - Carlos Cobas
- Mestrelab Research S.L.; Feliciano Barrera 9B-Bajo 15706 Santiago de Compostela Spain
| | | | - Craig P. Butts
- Department of Chemistry; University of Bristol; Cantocks Close Bristol. BS8 1TS UK
| |
Collapse
|
7
|
Lameiras P, Patis S, Jakhlal J, Castex S, Clivio P, Nuzillard JM. Small Molecule Mixture Analysis by Heteronuclear NMR under Spin Diffusion Conditions in Viscous DMSO-Water Solvent. Chemistry 2017; 23:4923-4928. [DOI: 10.1002/chem.201700636] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Indexed: 02/05/2023]
Affiliation(s)
- Pedro Lameiras
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| | - Solène Patis
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| | - Jouda Jakhlal
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| | - Stéphanie Castex
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| | - Pascale Clivio
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| | - Jean-Marc Nuzillard
- Université de Reims Champagne-Ardenne; Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, SFR CAP-Santé BP 1039; 51687 Reims Cedex 02 France
| |
Collapse
|
8
|
Foroozandeh M, Castañar L, Martins LG, Sinnaeve D, Poggetto GD, Tormena CF, Adams RW, Morris GA, Nilsson M. Ultrahigh-Resolution Diffusion-Ordered Spectroscopy. Angew Chem Int Ed Engl 2016; 55:15579-15582. [DOI: 10.1002/anie.201609676] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Indexed: 11/12/2022]
Affiliation(s)
| | - Laura Castañar
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Lucas G. Martins
- Chemistry Institute; University of Campinas; Post Office Box 6154 13083-970 Campinas SP Brazil
| | - Davy Sinnaeve
- Department of Organic and Macromolecular Chemistry; Ghent University; Campus Sterre, S4, Krijgslaan 281, B- 9000 Ghent Belgium
| | | | - Claudio F. Tormena
- Chemistry Institute; University of Campinas; Post Office Box 6154 13083-970 Campinas SP Brazil
| | - Ralph W. Adams
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Gareth A. Morris
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Mathias Nilsson
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| |
Collapse
|
9
|
Foroozandeh M, Castañar L, Martins LG, Sinnaeve D, Poggetto GD, Tormena CF, Adams RW, Morris GA, Nilsson M. Ultrahigh-Resolution Diffusion-Ordered Spectroscopy. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201609676] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
| | - Laura Castañar
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Lucas G. Martins
- Chemistry Institute; University of Campinas; Post Office Box 6154 13083-970 Campinas SP Brazil
| | - Davy Sinnaeve
- Department of Organic and Macromolecular Chemistry; Ghent University; Campus Sterre, S4, Krijgslaan 281, B- 9000 Ghent Belgium
| | | | - Claudio F. Tormena
- Chemistry Institute; University of Campinas; Post Office Box 6154 13083-970 Campinas SP Brazil
| | - Ralph W. Adams
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Gareth A. Morris
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Mathias Nilsson
- School of Chemistry; University of Manchester; Oxford Road Manchester M13 9PL UK
| |
Collapse
|
10
|
Kakita VMR, Hosur RV. Hadamard Homonuclear Broadband Decoupled TOCSY NMR: Improved Efficacy in Detecting Long-range Chemical Shift Correlations. Chemphyschem 2016; 17:4037-4042. [DOI: 10.1002/cphc.201600769] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2016] [Revised: 09/30/2016] [Indexed: 12/28/2022]
Affiliation(s)
- Veera Mohana Rao Kakita
- UM-DAE-Centre for Excellence in Basic Sciences; University of Mumbai; Kalina Campus, Santa Cruz Mumbai 400 098 India
| | - Ramakrishna V. Hosur
- UM-DAE-Centre for Excellence in Basic Sciences; University of Mumbai; Kalina Campus, Santa Cruz Mumbai 400 098 India
- Department of Chemical Sciences; Tata Institute of Fundamental Research (TIFR); 1-Homi Bhabha Road, Colaba Mumbai 400 005 India
| |
Collapse
|
11
|
Ndukwe IE, Shchukina A, Kazimierczuk K, Cobas C, Butts CP. EXtended ACquisition Time (EXACT) NMR-A Case for ′Burst′ Non-Uniform Sampling. Chemphyschem 2016; 17:2799-803. [DOI: 10.1002/cphc.201600541] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2016] [Indexed: 01/13/2023]
Affiliation(s)
- Ikenna E. Ndukwe
- School of Chemistry; University of Bristol; Cantocks Close Bristol BS8 1TS UK
| | - Alexandra Shchukina
- Centre of New Technologies; University of Warsaw; Banacha 2C 02089 Warszawa Poland
- Institute for Spectroscopy; Russian Academy of Sciences; Fizicheskaya 5 142190 Moscow Troitsk Russia
| | | | - Carlos Cobas
- Mestrelab Research S.L.; Feliciano Barrera 9B-Bajo 15706 Santiago de Compostela Spain
| | - Craig P. Butts
- School of Chemistry; University of Bristol; Cantocks Close Bristol BS8 1TS UK
| |
Collapse
|
12
|
Koos MRM, Kummerlöwe G, Kaltschnee L, Thiele CM, Luy B. CLIP-COSY: A Clean In-Phase Experiment for the Rapid Acquisition of COSY-type Correlations. Angew Chem Int Ed Engl 2016; 55:7655-9. [DOI: 10.1002/anie.201510938] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Revised: 02/05/2016] [Indexed: 11/09/2022]
Affiliation(s)
- Martin R. M. Koos
- Institut für Organische Chemie and Institut für Biologische, Grenzflächen 4-Magnetische Resonanz; Karlsruher Institut für Technologie (KIT); Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Grit Kummerlöwe
- Institut für Organische Chemie; Technische Universität München; Lichtenbergstrasse 4 85747 Garching Germany
| | - Lukas Kaltschnee
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie; Technische Universität Darmstadt; Alarich-Weiss-Strasse 16 64287 Darmstadt Germany
| | - Christina M. Thiele
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie; Technische Universität Darmstadt; Alarich-Weiss-Strasse 16 64287 Darmstadt Germany
| | - Burkhard Luy
- Institut für Organische Chemie and Institut für Biologische, Grenzflächen 4-Magnetische Resonanz; Karlsruher Institut für Technologie (KIT); Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| |
Collapse
|
13
|
Koos MRM, Kummerlöwe G, Kaltschnee L, Thiele CM, Luy B. CLIP-COSY: Reine Inphase-Signale und schnelle Akquisition COSY-artiger Korrelationen. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201510938] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Martin R. M. Koos
- Institut für Organische Chemie und Institut für Biologische, Grenzflächen 4 - Magnetische Resonanz; Karlsruher Institut für Technologie (KIT); Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
| | - Grit Kummerlöwe
- Institut für Organische Chemie; Technische Universität München; Lichtenbergstraße 4 85747 Garching Deutschland
| | - Lukas Kaltschnee
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie; Technische Universität Darmstadt; Alarich-Weiss-Straße 16 64287 Darmstadt Deutschland
| | - Christina M. Thiele
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie; Technische Universität Darmstadt; Alarich-Weiss-Straße 16 64287 Darmstadt Deutschland
| | - Burkhard Luy
- Institut für Organische Chemie und Institut für Biologische, Grenzflächen 4 - Magnetische Resonanz; Karlsruher Institut für Technologie (KIT); Fritz-Haber-Weg 6 76131 Karlsruhe Deutschland
| |
Collapse
|
14
|
Kakita VMR, Hosur RV. Non-Uniform-Sampling Ultrahigh Resolution TOCSY NMR: Analysis of Complex Mixtures at Microgram Levels. Chemphyschem 2016; 17:2304-8. [DOI: 10.1002/cphc.201600255] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2016] [Indexed: 12/27/2022]
Affiliation(s)
- Veera M. R. Kakita
- UM-DAE Centre for Excellence in Basic Sciences; Mumbai University Campus, Kalina, Santa Cruz Mumbai 400 098 India
| | - Ramakrishna V. Hosur
- UM-DAE Centre for Excellence in Basic Sciences; Mumbai University Campus, Kalina, Santa Cruz Mumbai 400 098 India
- Department of Chemical Sciences; Tata Institute of Fundamental Research (TIFR); 1-Homi Bhabha Road, Colaba Mumbai 400 005 India
| |
Collapse
|
15
|
Verma A, Baishya B. Real-time bilinear rotation decoupling in absorptive mode J-spectroscopy: Detecting low-intensity metabolite peak close to high-intensity metabolite peak with convenience. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 266:51-58. [PMID: 27026651 DOI: 10.1016/j.jmr.2016.03.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Revised: 03/02/2016] [Accepted: 03/05/2016] [Indexed: 06/05/2023]
Abstract
"Pure shift" NMR spectra display singlet peak per chemical site. Thus, high resolution is offered at the cost of valuable J-coupling information. In the present work, real-time BIRD (BIlinear Rotation Decoupling) is applied to the absorptive-mode 2D J-spectroscopy to provide pure shift spectrum in the direct dimension and J-coupling information in the indirect dimension. Quite often in metabolomics, proton NMR spectra from complex bio-fluids display tremendous signal overlap. Although conventional J-spectroscopy in principle overcomes this problem by separating the multiplet information from chemical shift information, however, only magnitude mode of the experiment is practical, sacrificing much of the potential high resolution that could be achieved. Few J-spectroscopy methods have been reported so far that produce high-resolution pure shift spectrum along with J-coupling information for crowded spectral regions. In the present work, high-quality J-resolved spectrum from important metabolomic mixture such as tissue extract from rat cortex is demonstrated. Many low-intensity metabolite peaks which are obscured by the broad dispersive tails from high-intensity metabolite peaks in regular magnitude mode J-spectrum can be clearly identified in real-time BIRD J-resolved spectrum. The general practice of removing such spectral overlap is tedious and time-consuming as it involves repeated sample preparation to change the pH of the tissue extract sample and subsequent spectra recording.
Collapse
Affiliation(s)
- Ajay Verma
- Centre of Biomedical Research (Formerly Centre of Biomedical Magnetic Resonance), SGPGIMS Campus, Raebareli Road, Lucknow 226014, India
| | - Bikash Baishya
- Centre of Biomedical Research (Formerly Centre of Biomedical Magnetic Resonance), SGPGIMS Campus, Raebareli Road, Lucknow 226014, India.
| |
Collapse
|
16
|
Glanzer S, Zangger K. Uniform Reduction of Scalar Coupling by Real-Time Homonuclear J-Downscaled NMR. Chemphyschem 2015; 16:3313-7. [DOI: 10.1002/cphc.201500640] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Indexed: 11/10/2022]
Affiliation(s)
- Simon Glanzer
- Institute of Chemistry/Organic and Bioorganic Chemistry; University of Graz; Heinrichstrasse 28 A-8010 Graz Austria
| | - Klaus Zangger
- Institute of Chemistry/Organic and Bioorganic Chemistry; University of Graz; Heinrichstrasse 28 A-8010 Graz Austria
| |
Collapse
|
17
|
Verma A, Baishya B. Real-Time Band-Selective Homonuclear Proton Decoupling for Improving Sensitivity and Resolution in Phase-SensitiveJ-Resolved Spectroscopy. Chemphyschem 2015; 16:2687-91. [DOI: 10.1002/cphc.201500377] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2015] [Indexed: 11/06/2022]
|
18
|
Pitoux D, Plainchont B, Merlet D, Hu Z, Bonnaffé D, Farjon J, Giraud N. Fully Resolved NMR Correlation Spectroscopy. Chemistry 2015; 21:9044-7. [DOI: 10.1002/chem.201501182] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2015] [Indexed: 11/07/2022]
|
19
|
Castañar L, Roldán R, Clapés P, Virgili A, Parella T. Disentangling Complex Mixtures of Compounds with Near-Identical1H and13C NMR Spectra using Pure Shift NMR Spectroscopy. Chemistry 2015; 21:7682-5. [DOI: 10.1002/chem.201500521] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2015] [Indexed: 11/07/2022]
|
20
|
Aguilar JA, Cassani J, Delbianco M, Adams RW, Nilsson M, Morris GA. Minimising Research Bottlenecks by Decluttering NMR Spectra. Chemistry 2015; 21:6623-30. [DOI: 10.1002/chem.201406283] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 01/27/2015] [Indexed: 11/11/2022]
|
21
|
Timári I, Illyés TZ, Adams RW, Nilsson M, Szilágyi L, Morris GA, Kövér KE. Precise measurement of long-range heteronuclear coupling constants by a novel broadband proton-proton-decoupled CPMG-HSQMBC method. Chemistry 2015; 21:3472-9. [PMID: 25573660 PMCID: PMC4338765 DOI: 10.1002/chem.201405535] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2014] [Indexed: 11/17/2022]
Abstract
A broadband proton–proton-decoupled CPMG-HSQMBC method for the precise and direct measurement of long-range heteronuclear coupling constants is presented. The Zangger–Sterk-based homodecoupling scheme reported herein efficiently removes unwanted proton–proton splittings from the heteronuclear multiplets, so that the desired heteronuclear couplings can be determined simply by measuring frequency differences between singlet maxima in the resulting spectra. The proposed pseudo-1D/2D pulse sequences were tested on nucleotides, a metal complex incorporating P heterocycles, and diglycosyl (di)selenides, as well as on other carbohydrate derivatives, for the extraction of nJ(1H,31P), nJ(1H,77Se), and nJ(1H,13C) values, respectively.
Collapse
Affiliation(s)
- István Timári
- Department of Inorganic and Analytical Chemistry, University of Debrecen, Egyetem tér 1, 4032 Debrecen (Hungary)
| | | | | | | | | | | | | |
Collapse
|
22
|
Glanzer S, Zangger K. Directly decoupled diffusion-ordered NMR spectroscopy for the analysis of compound mixtures. Chemistry 2014; 20:11171-5. [PMID: 25059845 PMCID: PMC4497316 DOI: 10.1002/chem.201402920] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2014] [Indexed: 11/06/2022]
Abstract
For the analysis of compound mixtures by NMR spectroscopy, it is important to assign the different peaks to the individual constituents. Diffusion-ordered spectroscopy (DOSY) is often used for the separation of signals based on their self-diffusion coefficient. However, this method often fails in the case of signal overlap, which is a particular problem for (1)H-detected DOSY spectra. Herein, an approach that allows the acquisition of homonuclear broadband-decoupled DOSY spectra without the introduction of an additional decoupling dimension, by instant decoupling during acquisition, is presented. It was demonstrated on a mixture of six alcohols, and the investigation of the binding of a dodecapeptide to membrane mimetics.
Collapse
Affiliation(s)
- Simon Glanzer
- Institute of Chemistry/Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, A-8010 Graz (Austria)
| | - Klaus Zangger
- Institute of Chemistry/Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, A-8010 Graz (Austria)
| |
Collapse
|
23
|
Foroozandeh M, Adams RW, Meharry NJ, Jeannerat D, Nilsson M, Morris GA. Ultrahigh-resolution NMR spectroscopy. Angew Chem Int Ed Engl 2014; 53:6990-2. [PMID: 24861024 PMCID: PMC4320760 DOI: 10.1002/anie.201404111] [Citation(s) in RCA: 231] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Indexed: 11/26/2022]
Affiliation(s)
- Mohammadali Foroozandeh
- School of Chemistry, University of ManchesterOxford Road, Manchester M13 9PL (UK)Homepage: http://nmr.chemistry.manchester.ac.uk
| | - Ralph W Adams
- School of Chemistry, University of ManchesterOxford Road, Manchester M13 9PL (UK)Homepage: http://nmr.chemistry.manchester.ac.uk
| | - Nicola J Meharry
- School of Chemistry, University of ManchesterOxford Road, Manchester M13 9PL (UK)Homepage: http://nmr.chemistry.manchester.ac.uk
| | - Damien Jeannerat
- Department of Organic Chemistry, University of Geneva30 Quai E. Ansermet, 1211 Geneva 4 (Switzerland)
| | - Mathias Nilsson
- Department of Food Science, University of CopenhagenRolighedsvej 30, 1958 Frederiksberg C (Denmark)
| | - Gareth A Morris
- School of Chemistry, University of ManchesterOxford Road, Manchester M13 9PL (UK)Homepage: http://nmr.chemistry.manchester.ac.uk
| |
Collapse
|
24
|
Foroozandeh M, Adams RW, Meharry NJ, Jeannerat D, Nilsson M, Morris GA. Ultrahigh-Resolution NMR Spectroscopy. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201404111] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
25
|
Castañar L, Pérez-Trujillo M, Nolis P, Monteagudo E, Virgili A, Parella T. Enantiodifferentiation through Frequency-Selective Pure-Shift1H Nuclear Magnetic Resonance Spectroscopy. Chemphyschem 2014; 15:854-7. [DOI: 10.1002/cphc.201301130] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2013] [Revised: 01/02/2014] [Indexed: 11/10/2022]
|
26
|
Castañar L, Nolis P, Virgili A, Parella T. Full sensitivity and enhanced resolution in homodecoupled band-selective NMR experiments. Chemistry 2013; 19:17283-6. [PMID: 24218341 DOI: 10.1002/chem.201303235] [Citation(s) in RCA: 104] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Indexed: 11/11/2022]
Affiliation(s)
- Laura Castañar
- Servei Ressonància Magnètica Nuclear, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona (Spain); Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona (Spain)
| | | | | | | |
Collapse
|
27
|
Paudel L, Adams RW, Király P, Aguilar JA, Foroozandeh M, Cliff MJ, Nilsson M, Sándor P, Waltho JP, Morris GA. Simultaneously enhancing spectral resolution and sensitivity in heteronuclear correlation NMR spectroscopy. Angew Chem Int Ed Engl 2013; 52:11616-9. [PMID: 24014213 PMCID: PMC4065349 DOI: 10.1002/anie.201305709] [Citation(s) in RCA: 145] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2013] [Indexed: 11/26/2022]
Abstract
BIRD's eye view: Adding periodic BIRD J-refocusing (BIRD=bilinear rotation decoupling) to data acquisition in an HSQC experiment causes broadband homonuclear decoupling, giving a single signal for each proton chemical shift. This pure shift method improves both resolution and signal-to-noise ratio, without the need for special data processing.
Collapse
Affiliation(s)
- Liladhar Paudel
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
| | - Ralph W Adams
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
| | - Péter Király
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
- Institute of Organic Chemistry, Hungarian Academy of SciencesPusztaszeri út 59–67, 1025 Budapest (Hungary)
| | - Juan A Aguilar
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
- Department of Chemistry, Durham UniversitySouth Road, Durham, DH1 3LE (UK)
| | | | - Matthew J Cliff
- Manchester Institute of Biotechnology131 Princess Street, Manchester, M1 7DN (UK)
| | - Mathias Nilsson
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
- Department of Food Science, University of CopenhagenRolighedsvej 30, 1958 Frederiksberg C (Denmark)
| | - Péter Sándor
- Agilent Technologies R & D a. Marketing GmbH & Co. KGHewlett–Packard Strasse 8, 76337 Waldbronn (Germany)
| | - Jonathan P Waltho
- Manchester Institute of Biotechnology131 Princess Street, Manchester, M1 7DN (UK)
| | - Gareth A Morris
- School of Chemistry, University of ManchesterOxford Road, Manchester, M13 9PL (UK)
| |
Collapse
|
28
|
Castañar L, Nolis P, Virgili A, Parella T. Simultaneous multi-slice excitation in spatially encoded NMR experiments. Chemistry 2013; 19:15472-5. [PMID: 24123372 DOI: 10.1002/chem.201303272] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2013] [Indexed: 11/08/2022]
Abstract
Improved sensitivity: A novel strategy to enhance the experimental sensitivity in spatially encoded NMR experiments has been developed. The use of a multiple-frequency modulated pulse applied simultaneously to an encoding gradient can afford a substantial sensitivity gain with respect to single-slice selected experiments.
Collapse
Affiliation(s)
- Laura Castañar
- Servei Ressonància Magnètica Nuclear and Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona (Spain)
| | | | | | | |
Collapse
|
29
|
Paudel L, Adams RW, Király P, Aguilar JA, Foroozandeh M, Cliff MJ, Nilsson M, Sándor P, Waltho JP, Morris GA. Simultaneously Enhancing Spectral Resolution and Sensitivity in Heteronuclear Correlation NMR Spectroscopy. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201305709] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|