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Zheng Y, Chen J, Duan C, Zhang X, Xu X, Gou Q. Accurate Geometry and Non-Covalent Interactions in 1-Phenylethanol and Its Monohydrate: A Rotational Study. Chemphyschem 2022; 24:e202200804. [PMID: 36537871 DOI: 10.1002/cphc.202200804] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 12/15/2022] [Accepted: 12/16/2022] [Indexed: 12/24/2022]
Abstract
The pure rotational spectra of 1-phenylethanol and its monohydrate were measured by using a pulsed jet Fourier transform microwave spectrometer. One conformer of the 1-phenylethanol monomer with the trans form was observed in the pulsed jet. The experimental values of rotational constants of ten isotopologues, including eight mono-substituted 13 C and one D isotopologues, allow an accurate structure determination of the skeleton of 1-phenylethanol. For its monohydrate, only one isomer has been observed, of which 1-phenylethanol adopts the trans form and binds with water through an O-H⋅⋅⋅Ow and an Ow -H⋅⋅⋅π hydrogen bond. Each rotational transition displays a doublet with a relative intensity ratio of 1 : 3, due to a hindered internal rotation of water around its C2 axis. This study provides the information on accurate geometry of 1-phenylethanol (PE) and large amplitude motion of water in the PE monohydrate.
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Affiliation(s)
- Yang Zheng
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Daxuecheng South Rd. 55, 401331, Chongqing, China.,Sinopec Maoming Petrochemical Company, 525000, Maoming, Guangdong, China
| | - Junhua Chen
- School of Pharmacy, Guizhou Medical University, 550025, Guiyang, Guizhou, China
| | - Chunguo Duan
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Daxuecheng South Rd. 55, 401331, Chongqing, China
| | - Xinyue Zhang
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Daxuecheng South Rd. 55, 401331, Chongqing, China
| | - Xuefang Xu
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Daxuecheng South Rd. 55, 401331, Chongqing, China
| | - Qian Gou
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Daxuecheng South Rd. 55, 401331, Chongqing, China.,Congqing Key Laboratory of Theoretical and Computational Chemistry, Daxuecheng South Rd. 55, 401331, Chongqing, China
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2
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Xie F, Fusè M, Hazrah AS, Jäger W, Barone V, Xu Y. Discovering the Elusive Global Minimum in a Ternary Chiral Cluster: Rotational Spectra of Propylene Oxide Trimer. Angew Chem Int Ed Engl 2020; 59:22427-22430. [PMID: 32896062 PMCID: PMC7984290 DOI: 10.1002/anie.202010055] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Indexed: 12/31/2022]
Abstract
The chirality controlled conformational landscape of the trimer of propylene oxide (PO), a prototypical chiral molecule, was investigated using rotational spectroscopy and a range of theoretical tools for conformational searches and for evaluating vibrational contributions to effective structures. Two sets of homochiral (PO)3 rotational transitions were assigned and the associated conformers identified with theoretical support. One set of heterochiral (PO)3 transitions was assigned, but no structures generated by one of the latest, advanced conformational search codes could account for them. With the aid of a Python program, the carbon atom backbone and then the heterochiral (PO)3 structure were generated using 13 C isotopic data. Excellent agreement between theoretical and experimental rotational constants and relative dipole moment components of all three conformers was achieved, especially after applying vibrational corrections to the rotational constants.
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Affiliation(s)
- Fan Xie
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
| | - Marco Fusè
- Scuola Normale SuperiorePiazza dei Cavalieri 756126PisaItaly
| | - Arsh S. Hazrah
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
| | - Wolfgang Jäger
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
| | - Vincenzo Barone
- Scuola Normale SuperiorePiazza dei Cavalieri 756126PisaItaly
| | - Yunjie Xu
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
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3
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Xie F, Fusè M, Hazrah AS, Jäger W, Barone V, Xu Y. Discovering the Elusive Global Minimum in a Ternary Chiral Cluster: Rotational Spectra of Propylene Oxide Trimer. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202010055] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Fan Xie
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Marco Fusè
- Scuola Normale Superiore Piazza dei Cavalieri 7 56126 Pisa Italy
| | - Arsh S. Hazrah
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Wolfgang Jäger
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Vincenzo Barone
- Scuola Normale Superiore Piazza dei Cavalieri 7 56126 Pisa Italy
| | - Yunjie Xu
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
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4
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Juanes M, Saragi RT, Caminati W, Lesarri A. The Hydrogen Bond and Beyond: Perspectives for Rotational Investigations of Non‐Covalent Interactions. Chemistry 2019; 25:11402-11411. [DOI: 10.1002/chem.201901113] [Citation(s) in RCA: 63] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2019] [Revised: 04/15/2019] [Indexed: 12/22/2022]
Affiliation(s)
- Marcos Juanes
- Departamento de Química Física y Química Inorgánica—IU CINQUIMAFacultad de CienciasUniversidad de Valladolid 47011 Valladolid Spain
| | - Rizalina T. Saragi
- Departamento de Química Física y Química Inorgánica—IU CINQUIMAFacultad de CienciasUniversidad de Valladolid 47011 Valladolid Spain
| | - Walther Caminati
- Dipartimento di Chimica “G. Ciamician”Università di Bologna Via Selmi 2 40126 Bologna Italy
| | - Alberto Lesarri
- Departamento de Química Física y Química Inorgánica—IU CINQUIMAFacultad de CienciasUniversidad de Valladolid 47011 Valladolid Spain
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5
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Thomas J, Mariona E, Xu Y. Rotational spectra of two six-membered heterocyclic N-methyl-piperidinol compounds: Conformations by OH rotation, N-methyl inversion, and ring puckering. J Chem Phys 2017; 146:104303. [DOI: 10.1063/1.4977895] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- Javix Thomas
- Department of Chemistry, University of Alberta, Edmonton T6G 2G2, Canada
| | - Eric Mariona
- Department of Chemistry, University of Alberta, Edmonton T6G 2G2, Canada
| | - Yunjie Xu
- Department of Chemistry, University of Alberta, Edmonton T6G 2G2, Canada
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6
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Thomas J, Seifert NA, Jäger W, Xu Y. A Direct Link from the Gas to the Condensed Phase: A Rotational Spectroscopic Study of 2,2,2-Trifluoroethanol Trimers. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201612161] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Javix Thomas
- Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G2 Canada
| | - Nathan A. Seifert
- Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G2 Canada
| | - Wolfgang Jäger
- Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G2 Canada
| | - Yunjie Xu
- Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G2 Canada
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7
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Thomas J, Seifert NA, Jäger W, Xu Y. A Direct Link from the Gas to the Condensed Phase: A Rotational Spectroscopic Study of 2,2,2-Trifluoroethanol Trimers. Angew Chem Int Ed Engl 2017; 56:6289-6293. [PMID: 28229516 DOI: 10.1002/anie.201612161] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Indexed: 11/07/2022]
Abstract
Rotational spectra of the three most stable conformers (I, II, III) of the ternary 2,2,2-trifluoroethanol (TFE) cluster were measured using Fourier transform microwave spectrometers, and unambiguously assigned with the aid of ab initio calculations. The most stable conformer, I, contains one trans-TFE subunit which is unstable in its isolated gas phase form. The study offers new insights into how the trans conformation is stabilized in TFE clusters of increasing size, and eventually becomes a dominant conformation in the liquid phase. A detailed analysis shows that while O-H⋅⋅⋅O-H and O-H⋅⋅⋅F-C hydrogen bonds are the most significant attractive interactions which stabilize all three conformers, the main driving force for the stability of I over III, which has all gauche-TFE subunits, is the attractive interaction of C-F⋅⋅⋅F-C contact pairs. A new type of three-point F⋅⋅⋅F⋅⋅⋅F attractive contact interaction is also identified.
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Affiliation(s)
- Javix Thomas
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - Nathan A Seifert
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - Wolfgang Jäger
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - Yunjie Xu
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
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Daly S, Tia M, Garcia GA, Nahon L, Powis I. The Interplay Between Conformation and Absolute Configuration in Chiral Electron Dynamics of Small Diols. Angew Chem Int Ed Engl 2016; 55:11054-8. [PMID: 27445202 DOI: 10.1002/anie.201603771] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Revised: 05/21/2016] [Indexed: 11/07/2022]
Abstract
A competition between chiral characteristics alternatively attributable to either conformation or to absolute configuration is identified. Circular dichroism associated with photoexcitation of the outer orbital of configurational enantiomers of 1,3- and 2,3-butanediols has been examined with a focus on the large changes in electron chiral asymmetry produced by different molecular conformations. Experimental gas-phase measurements offer support for the theoretical modeling of this chiroptical effect. A surprising prediction is that a conformationally produced pseudo-enantiomerism in 1,3-butanediol generates a chiral response in the frontier electron dynamics that outweighs the influence of the permanent configurational handedness established at the asymmetrically substituted carbon. Induced conformation, and specifically induced conformational chirality, may thus be a dominating factor in chiral molecular recognition in such systems.
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Affiliation(s)
- Steven Daly
- School of Chemistry, University Park, University of Nottingham, Nottingham, NG7 2RD, UK.,Synchrotron SOLEIL, l'Orme des Merisiers, Saint Aubin BP 48, 91192, Gif sur Yvette Cedex, France.,Institut Lumiere Matière, UMR5306, CNRS, Université Lyon 1, 69622, Villeurbanne, France
| | - Maurice Tia
- Synchrotron SOLEIL, l'Orme des Merisiers, Saint Aubin BP 48, 91192, Gif sur Yvette Cedex, France.,Institut für Kernphysik, Johann Wolfgang Goethe Universität, Max-von-Laue-Strasse 1, 60438, Frankfurt am Main, Germany
| | - Gustavo A Garcia
- Synchrotron SOLEIL, l'Orme des Merisiers, Saint Aubin BP 48, 91192, Gif sur Yvette Cedex, France
| | - Laurent Nahon
- Synchrotron SOLEIL, l'Orme des Merisiers, Saint Aubin BP 48, 91192, Gif sur Yvette Cedex, France
| | - Ivan Powis
- School of Chemistry, University Park, University of Nottingham, Nottingham, NG7 2RD, UK.
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Daly S, Tia M, Garcia GA, Nahon L, Powis I. The Interplay Between Conformation and Absolute Configuration in Chiral Electron Dynamics of Small Diols. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201603771] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Steven Daly
- School of Chemistry; University Park, University of Nottingham; Nottingham NG7 2RD UK
- Synchrotron SOLEIL, l'Orme des Merisiers; Saint Aubin BP 48 91192 Gif sur Yvette Cedex France
- Institut Lumiere Matière, UMR5306, CNRS, Université Lyon 1; 69622 Villeurbanne France
| | - Maurice Tia
- Synchrotron SOLEIL, l'Orme des Merisiers; Saint Aubin BP 48 91192 Gif sur Yvette Cedex France
- Institut für Kernphysik; Johann Wolfgang Goethe Universität; Max-von-Laue-Strasse 1 60438 Frankfurt am Main Germany
| | - Gustavo A. Garcia
- Synchrotron SOLEIL, l'Orme des Merisiers; Saint Aubin BP 48 91192 Gif sur Yvette Cedex France
| | - Laurent Nahon
- Synchrotron SOLEIL, l'Orme des Merisiers; Saint Aubin BP 48 91192 Gif sur Yvette Cedex France
| | - Ivan Powis
- School of Chemistry; University Park, University of Nottingham; Nottingham NG7 2RD UK
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10
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Thomas J, Liu X, Jäger W, Xu Y. Unusual H-Bond Topology and Bifurcated H-bonds in the 2-Fluoroethanol Trimer. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201505934] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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11
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Thomas J, Liu X, Jäger W, Xu Y. Unusual H-Bond Topology and Bifurcated H-bonds in the 2-Fluoroethanol Trimer. Angew Chem Int Ed Engl 2015; 54:11711-5. [PMID: 26276699 DOI: 10.1002/anie.201505934] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2015] [Indexed: 11/06/2022]
Abstract
By using a combination of rotational spectroscopy and ab initio calculations, an unusual H-bond topology was revealed for the 2-fluoroethanol trimer. The trimer exhibits a strong heterochiral preference and adopts an open OH⋅⋅⋅OH H-bond topology while utilizing two types of bifurcated H-bonds involving organic fluorine. This is in stark contrast to the cyclic OH⋅⋅⋅OH H-bond topology adopted by trimers of water and other simple alcohols. The strengths of different H-bonds in the trimer were analyzed by using the quantum theory of atoms in molecules. The study showcases a remarkable example of a chirality-induced switch in H-bond topology in a simple transient chiral fluoroalcohol. It provides important insight into the H-bond topologies of small fluoroalcohol aggregates, which are proposed to play a key role in protein folding and in enantioselective reactions and separations where fluoroalcohols serve as a (co)solvent.
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Affiliation(s)
- Javix Thomas
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2 (Canada)
| | - Xunchen Liu
- School of Mechanical Engineering, Shanghai Jiao Tong University, No.800 Dong Chuan Road, Shanghai, 200240 (P.R. China)
| | - Wolfgang Jäger
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2 (Canada)
| | - Yunjie Xu
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2 (Canada).
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12
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Seifert NA, Pérez C, Neill JL, Pate BH, Vallejo-López M, Lesarri A, Cocinero EJ, Castaño F. Chiral recognition and atropisomerism in the sevoflurane dimer. Phys Chem Chem Phys 2015; 17:18282-7. [DOI: 10.1039/c5cp01025j] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Transient chirality in the anesthetic sevoflurane results in two different homo- and heterochiral clusters on formation of the dimer, as observed by rotational spectroscopy.
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Affiliation(s)
| | - Cristóbal Pérez
- Department of Chemistry
- University of Virginia
- Charlottesville
- USA
| | - Justin L. Neill
- Department of Chemistry
- University of Virginia
- Charlottesville
- USA
| | - Brooks H. Pate
- Department of Chemistry
- University of Virginia
- Charlottesville
- USA
| | - Montserrat Vallejo-López
- Departamento de Química Física y Química Inorgánica
- Facultad de Ciencias
- Universidad de Valladolid
- 47011 Valladolid
- Spain
| | - Alberto Lesarri
- Departamento de Química Física y Química Inorgánica
- Facultad de Ciencias
- Universidad de Valladolid
- 47011 Valladolid
- Spain
| | - Emilio J. Cocinero
- Departamento de Química Física
- Facultad de Ciencia y Tecnología
- Universidad del País Vasco (UPV-EHU)
- 48080 Bilbao
- Spain
| | - Fernando Castaño
- Departamento de Química Física
- Facultad de Ciencia y Tecnología
- Universidad del País Vasco (UPV-EHU)
- 48080 Bilbao
- Spain
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