1
|
Zhang S, De Leon Rodriguez LM, Li FF, Brimble MA. Recent developments in the cleavage, functionalization, and conjugation of proteins and peptides at tyrosine residues. Chem Sci 2023; 14:7782-7817. [PMID: 37502317 PMCID: PMC10370606 DOI: 10.1039/d3sc02543h] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 06/26/2023] [Indexed: 07/29/2023] Open
Abstract
Peptide and protein selective modification at tyrosine residues has become an exploding field of research as tyrosine constitutes a robust alternative to lysine and cysteine-targeted traditional peptide/protein modification protocols. This review offers a comprehensive summary of the latest advances in tyrosine-selective cleavage, functionalization, and conjugation of peptides and proteins from the past three years. This updated overview complements the extensive body of work on site-selective modification of peptides and proteins, which holds significant relevance across various disciplines, including chemical, biological, medical, and material sciences.
Collapse
Affiliation(s)
- Shengping Zhang
- Center for Translational Medicine, Shenzhen Bay Laboratory New Zealand
- School of Chemical Sciences, The University of Auckland 23 Symonds St Auckland 1010 New Zealand
- School of Biological Sciences, The University of Auckland 3A Symonds St Auckland 1010 New Zealand
| | | | - Freda F Li
- School of Chemical Sciences, The University of Auckland 23 Symonds St Auckland 1010 New Zealand
- Maurice Wilkins Centre for Molecular Biodiscovery, The University of Auckland 1142 New Zealand
| | - Margaret A Brimble
- School of Chemical Sciences, The University of Auckland 23 Symonds St Auckland 1010 New Zealand
- School of Biological Sciences, The University of Auckland 3A Symonds St Auckland 1010 New Zealand
- Maurice Wilkins Centre for Molecular Biodiscovery, The University of Auckland 1142 New Zealand
| |
Collapse
|
2
|
Davis GJ, Townsend JA, Morrow MG, Hamie M, Shepard AJ, Hsieh CC, Marty MT, Jewett JC. Protein Modification via Mild Photochemical Isomerization of Triazenes to Release Aryl Diazonium Ions. Bioconjug Chem 2021; 32:2432-2438. [PMID: 34730351 DOI: 10.1021/acs.bioconjchem.1c00459] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
This work describes the development of phenyl diazenyl piperidine triazene derivatives that can be activated to release aryl diazonium ions for labeling of proteins using light. These probes show marked bench stability at room temperature and can be photoisomerized via low-intensity UVA irradiation at physiological pH. Upon isomerization, the triazenes are rendered more basic and readily protonate to release reactive aryl diazonium ions. It was discovered that the intensity and duration of the UV light was essential to the observed diazonium ion reactivity in competition with the traditionally observed photolytic radical pathways. The combination of their synthetic efficiency coupled with their overall stability makes triazenes an attractive candidate for use in bioconjugation applications. Bioorthogonal handles on the triazenes are used to demonstrate the ease by which proteins can be modified.
Collapse
Affiliation(s)
- Garrett J Davis
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Julia A Townsend
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Madeline G Morrow
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Mohamed Hamie
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Abigail J Shepard
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Chih-Chieh Hsieh
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - Michael T Marty
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| | - John C Jewett
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 East University Boulevard, Tucson, Arizona 85721, United States
| |
Collapse
|
3
|
Alvarez Dorta D, Deniaud D, Mével M, Gouin SG. Tyrosine Conjugation Methods for Protein Labelling. Chemistry 2020; 26:14257-14269. [DOI: 10.1002/chem.202001992] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 06/09/2020] [Indexed: 12/23/2022]
Affiliation(s)
| | - David Deniaud
- CNRS, CEISAM UMR, 6230 Université de Nantes 44000 Nantes France
| | - Mathieu Mével
- CHU de Nantes, INSERM UMR 1089 Université de Nantes 44200 Nantes France
| | | |
Collapse
|
4
|
Barragan E, Noonikara‐Poyil A, Bugarin A. π‐Conjugated Triazenes and Nitriles: Simple Photoinduced Synthesis of Anilides Using Mild and Metal‐Free Conditions. ASIAN J ORG CHEM 2020. [DOI: 10.1002/ajoc.201900721] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Enrique Barragan
- Department of Chemistry and BiochemistryUniversity of Texas at Arlington Arlington TX 76019 USA
| | - Anurag Noonikara‐Poyil
- Department of Chemistry and BiochemistryUniversity of Texas at Arlington Arlington TX 76019 USA
| | - Alejandro Bugarin
- Department of Chemistry and PhysicsFlorida Gulf Coast University Fort Myers FL 33965 USA
| |
Collapse
|
5
|
Boom DHA, Jupp AR, Nieger M, Ehlers AW, Slootweg JC. New Insights in Frustrated Lewis Pair Chemistry with Azides. Chemistry 2019; 25:13299-13308. [PMID: 31497899 PMCID: PMC6851766 DOI: 10.1002/chem.201902710] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Indexed: 12/16/2022]
Abstract
The geminal frustrated Lewis pair (FLP) tBu2 PCH2 BPh2 (1) reacts with phenyl-, mesityl-, and tert-butyl azide affording, respectively, six, five, and four-membered rings as isolable products. DFT calculations revealed that the formation of all products proceeds via the six-membered ring structure, which is thermally stable with an N-phenyl group, but rearranges when sterically more encumbered Mes-N3 and tBu-N3 are used. The reaction of 1 with Me3 Si-N3 is believed to follow the same course, yet subsequent N2 elimination occurs to afford a four-membered heterocycle (5), which can be considered as a formal FLP-trimethylsilylnitrene adduct. Compound 5 reacts with hydrochloric acid or tetramethylammonium fluoride and showed frustrated Lewis pair reactivity towards phenylisocyanate.
Collapse
Affiliation(s)
- Devin H. A. Boom
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041090 GDAmsterdamThe Netherlands
| | - Andrew R. Jupp
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041090 GDAmsterdamThe Netherlands
| | - Martin Nieger
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio 1, PO Box 5500014HelsinkiFinland
| | - Andreas W. Ehlers
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041090 GDAmsterdamThe Netherlands
- Department of Chemistry, Science FacultyUniversity of JohannesburgPO Box 254Auckland Park, JohannesburgSouth Africa
| | - J. Chris Slootweg
- Van't Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041090 GDAmsterdamThe Netherlands
| |
Collapse
|
6
|
Shadmehr M, Davis GJ, Mehari BT, Jensen SM, Jewett JC. Coumarin Triazabutadienes for Fluorescent Labeling of Proteins. Chembiochem 2018; 19:2550-2552. [PMID: 30341988 DOI: 10.1002/cbic.201800599] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2018] [Indexed: 11/06/2022]
Abstract
The use of small-molecule fluorophores to label proteins with minimal perturbation in response to an external stimulus is a powerful tool to probe chemical and biochemical environments. Herein, we describe the use of a coumarin-modified triazabutadiene that can deliver aryl diazonium ions to fluorescently label proteins by tyrosine-selective modification. The labeling can be triggered by low-pH-induced liberation of the diazonium species, thus making the fluorophore especially useful in labeling biochemical surroundings such as those found within the late endosome. Additionally, we show that a variety of coumarin triazabutadienes might also be prone to releasing their diazonium cargo after irradiation with UV light.
Collapse
Affiliation(s)
- Mehrdad Shadmehr
- Chemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA
| | - Garrett J Davis
- Chemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA
| | - Bereketab T Mehari
- Chemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA
| | - Stephanie M Jensen
- Chemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA
| | - John C Jewett
- Chemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA
| |
Collapse
|
7
|
Samuel PP, Kundu S, Mohapatra C, George A, De S, Parameswaran P, Roesky HW. One‐Pot Catalytic Synthesis of
gem
‐Diazides and Their Direct Conversion into Safe Materials. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700433] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Prinson P. Samuel
- Universität Göttingen Institut für Anorganische Chemie Tammannstr. 4 37077 Göttingen Germany
| | - Subrata Kundu
- Universität Göttingen Institut für Anorganische Chemie Tammannstr. 4 37077 Göttingen Germany
| | - Chandrajeet Mohapatra
- Universität Göttingen Institut für Anorganische Chemie Tammannstr. 4 37077 Göttingen Germany
| | - Anjana George
- Department of Chemistry National Institute of Technology Calicut NIT campus P. O. 673601 Kozhikodu Kerala India
| | - Susmita De
- Department of Chemistry National Institute of Technology Calicut NIT campus P. O. 673601 Kozhikodu Kerala India
| | - Pattiyil Parameswaran
- Department of Chemistry National Institute of Technology Calicut NIT campus P. O. 673601 Kozhikodu Kerala India
| | - Herbert W. Roesky
- Universität Göttingen Institut für Anorganische Chemie Tammannstr. 4 37077 Göttingen Germany
| |
Collapse
|
8
|
Jensen SM, Kimani FW, Jewett JC. Light-Activated Triazabutadienes for the Modification of a Viral Surface. Chembiochem 2016; 17:2216-2219. [PMID: 27647786 PMCID: PMC5170875 DOI: 10.1002/cbic.201600508] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2016] [Indexed: 11/10/2022]
Abstract
Chemical crosslinking is a versatile tool for the examination of biochemical interactions, in particular host-pathogen interactions. We report the critical first step toward the goal of probing these interactions by the synthesis and use of a new heterobifunctional crosslinker containing a triazabutadiene scaffold. The triazabutadiene is stable to protein conjugation and liberates a reactive aryl diazonium species upon irradiation with 350 nm light. We highlight the use of this technology by modifying the surface of several proteins, including the dengue virus envelope protein.
Collapse
Affiliation(s)
- Stephanie M Jensen
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| | - Flora W Kimani
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| | - John C Jewett
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| |
Collapse
|
9
|
Guzman LE, Kimani FW, Jewett JC. Protecting Triazabutadienes To Afford Acid Resistance. Chembiochem 2016; 17:2220-2222. [PMID: 27662242 DOI: 10.1002/cbic.201600517] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Indexed: 11/10/2022]
Abstract
Recent work on triazabutadienes has shown that they have the ability to release aryl diazonium ions under exceptionally mild acidic conditions. There are instances that require that this release be prevented or minimized. Accordingly, a base-labile protection strategy for the triazabutadiene is presented. It affords enhanced synthetic and practical utility of the triazabutadiene. The effects of steric and electronic factors in the rate of removal are discussed, and the triazabutadiene protection is shown to be compatible with the traditional acid-labile protection strategy used in solid phase peptide synthesis.
Collapse
Affiliation(s)
- Lindsay E Guzman
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| | - Flora W Kimani
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| | - John C Jewett
- Department of Chemistry and Biochemistry, University of Arizona, Building 41, Room 104, 1306 E University Boulevard, Tucson, AZ, 85721, USA
| |
Collapse
|