1
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Goldup SM. The End of the Beginning of Mechanical Stereochemistry. Acc Chem Res 2024. [PMID: 38830116 DOI: 10.1021/acs.accounts.4c00195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2024]
Abstract
ConspectusStereochemistry has played a key role in the development of synthetic chemistry for the simple reason that the function and properties of most molecules, from medicine to materials science, depend on their shape and thus the stereoisomer used. However, despite the potential for rotaxanes and catenanes to display unusual forms of stereochemistry being identified as early as 1961, this aspect of the mechanical bond remained underexplored and underexploited; until 2014 it was only possible to access chiral rotaxanes and catenanes whose stereoisomerism is solely attributable to the mechanical bond using chiral stationary phase high performance liquid chromatography, which limited their production on scale and thus inhibited the investigation of their properties and applications. Furthermore, the stereogenic units of such molecules and analogues were often poorly described, which made it hard to fully articulate both what had been achieved in the field and what problems were left to solve. Relatively recently, methods to access rotaxanes and catenanes that display mechanical stereochemistry selectively have been developed, making these intriguing structures available for study in a range of prototypical applications including catalysis, sensing, and as chiral luminophores.In this Account, we briefly discuss the history of mechanical stereochemistry, beginning in 1961 when the potential for mechanical stereoisomerism was first identified, before defining how mechanical stereochemistry arises from a structural point of view. Building on this, using simple stereochemical arguments, we confirm that the complete set of unique stereogenic units of two-component rotaxanes and catenanes have finally been identified and categorized unambiguously, with the last being identified only in 2024. After pausing to discuss some of the stereochemical curiosities that arise when molecules contain both covalent and mechanical stereogenic units, and the potential for stereoisomerism to arise due to co-conformational movement, we use our stereochemical framework to summarize our efforts to develop conceptually general approaches to [2]catenanes and [2]rotaxanes containing all of the possible mechanical stereogenic units. In particular, we highlight how the nature of a mechanical stereogenic unit affects the available strategies for their stereoselective synthesis. We finish by highlighting recent prototypical chemical applications of interlocked molecules that rely on their mechanical stereochemistry, before discussing future directions and challenges.Taken together, we propose that the transition of such molecules from being hard to make and poorly described, to being available in high stereopurity using clearly articulated methodological and stereochemical concepts suggests that the field is finally maturing. Thus, we are now coming to the end of the beginning of mechanical stereochemistry. The stage is now set for such molecules to play a functional role in a range of areas, indeed in any chemical or physical application where control over molecular shape is required.
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Affiliation(s)
- Stephen M Goldup
- School of Chemistry, University of Birmingham, Birmingham B15 2TT, U.K
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2
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Dey S, Aggarwal M, Chakraborty D, Mukherjee PS. Uncovering tetrazoles as building blocks for constructing discrete and polymeric assemblies. Chem Commun (Camb) 2024; 60:5573-5585. [PMID: 38738480 DOI: 10.1039/d4cc01616e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/14/2024]
Abstract
Metal-organic self-assembly with flexible moieties is a budding field of research due to the possibility of the formation of unique architectures. Tetrazole, characterised by four nitrogen atoms in a five-member ring, exhibits immense potential as a component. Tetrazole offers four coordination sites for binding to the metal centre with nine distinct binding modes, leading to various assemblies. This review highlights different polymeric and discrete tetrazole-based assemblies and their functions. The meticulous manipulation of stoichiometry, ligands, and metal ions required for constructing discrete assemblies has also been discussed. The different applications of these architectures in separation, catalysis and detection have also been accentuated. The latter section of the review consolidates tetrazole-based cage composites, highlighting their applications in cell imaging and photocatalytic applications.
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Affiliation(s)
- Soumya Dey
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
| | - Medha Aggarwal
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
| | - Debsena Chakraborty
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
| | - Partha Sarathi Mukherjee
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
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3
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Savoini A, Gallagher PR, Saady A, Goldup SM. The Final Stereogenic Unit of [2]Rotaxanes: Type 2 Geometric Isomers. J Am Chem Soc 2024; 146:8472-8479. [PMID: 38499387 PMCID: PMC10979452 DOI: 10.1021/jacs.3c14594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 02/12/2024] [Accepted: 02/14/2024] [Indexed: 03/20/2024]
Abstract
Mechanical stereochemistry arises when the interlocking of stereochemically trivial covalent subcomponents results in a stereochemically complex object. Although this general concept was identified in 1961, the stereochemical description of these molecules is still under development to the extent that new forms of mechanical stereochemistry are still being identified. Here, we present a simple analysis of rotaxane and catenane stereochemistry that allowed us to identify the final missing simple mechanical stereogenic unit, an overlooked form of rotaxane geometric isomerism, and demonstrate its stereoselective synthesis.
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Affiliation(s)
- Andrea Savoini
- School
of Chemistry, University of Southampton, University Road, Southampton SO17 1BJ, U.K.
- School
of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, U.K.
| | - Peter R. Gallagher
- School
of Chemistry, University of Southampton, University Road, Southampton SO17 1BJ, U.K.
- School
of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, U.K.
| | - Abed Saady
- School
of Chemistry, University of Southampton, University Road, Southampton SO17 1BJ, U.K.
- School
of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, U.K.
| | - Stephen M. Goldup
- School
of Chemistry, University of Southampton, University Road, Southampton SO17 1BJ, U.K.
- School
of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, U.K.
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4
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Li Y, Jiang H, Zhang W, Zhao X, Sun M, Cui Y, Liu Y. Hetero- and Homointerlocked Metal-Organic Cages. J Am Chem Soc 2024; 146:3147-3159. [PMID: 38279915 DOI: 10.1021/jacs.3c10734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2024]
Abstract
Interlocked molecular assemblies constitute a captivating ensemble of chemical topologies, comprising two or more separate components that exhibit remarkably intricate structures. The interlocked molecular assemblies are typically identical, and heterointerlocked systems that comprise structurally distinct assemblies remain unexplored. Here, we demonstrate that metal-templated synthesis can be exploited to afford not only a homointerlocked cage but also a heterointerlocked cage. Treatment of a carboxylated 2,9-dimethyl-1,10-phenanthroline (dmp) or Cu(I) bis-dmp linker with a Ni4-p-tert-butylsulfonylcalix[4]arene cluster affords noninterlocked octahedron and quadruply interlocked double cages consisting of two identical tetragonal pyramids, respectively. In contrast, when a mixture of dmp and Cu(I) bis-dmp linkers is used, a quadruply heterointerlocked cage is produced, consisting of a tetragonal pyramid and an octahedron. With photoredox-active [Cu(dmp)2]+ in the structures, both interlocked cages exhibit remarkable performance as photocatalysts for atom transfer radical addition (ATRA) reactions of trifluoromethanesulfonyl chloride with alkenes or oxo-azidations of vinyl arenes. These interlocked structures serve the dual purpose of stabilizing photocatalytically active components against deactivation and encapsulating substrates within the cavity, resulting in yields comparable to or even surpassing those of their molecular counterparts. This work thus provides a new strategy that combines metal templating and nontemplating approaches to design new types of interlocked assemblies with intriguing architectures and properties.
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Affiliation(s)
- Yingguo Li
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Hong Jiang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Wenqiang Zhang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xiangxiang Zhao
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Meng Sun
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yong Cui
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yan Liu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
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5
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Zhang HN, Jin GX. Controllable Topological Transformations of 8 18 Molecular Metalla-knots by Oxidation of Thiazole-Based Ligands. Angew Chem Int Ed Engl 2023; 62:e202313605. [PMID: 37783666 DOI: 10.1002/anie.202313605] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 10/02/2023] [Accepted: 10/02/2023] [Indexed: 10/04/2023]
Abstract
By exploiting coordination-driven self-assembly, high yields of two 818 molecular metalla-knots could be obtained using a thiazole-moiety-containing asymmetric dipyridyl ligand 2-(pyridin-4-yl)-5-(pyridin-4-ylethynyl)benzo[d]thiazole (L1 ), as confirmed using X-ray crystallographic analysis, electrospray ionization-time-of-flight/mass spectrometry (ESI-TOF/MS), and detailed liquid-state nuclear magnetic resonance (NMR) spectroscopy. To modulate the self-assembled structures, m-chloroperbenzoic acid (m-CPBA) was utilized to oxidize thiazole-based ligand L1 to N-thiazole-oxide-based ligand 2-(pyridin-4-yl)-5-(pyridin-4-ylethynyl)benzo[d]thiazole 3-oxide (L2 ), which enabled the selective construction of the corresponding tetranuclear macrocycles. Notably, two molecular metalla-knots could be topologically transformed from 818 knots to simple monocycles because the L1 alkyne bond was inert toward m-CPBA, as confirmed by liquid-state NMR spectroscopy, ESI-TOF/MS, and elemental analysis.
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Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, 2005 Songhu Rd, 200438, Shanghai, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, 2005 Songhu Rd, 200438, Shanghai, P. R. China
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6
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Han J, Liu Z, Yang R, Yang F, Zhang ZH, Zhang L. A stereoselective protocol for the synthesis of a molecular cinquefoil (5 1) knot. STAR Protoc 2023; 4:102398. [PMID: 37405927 PMCID: PMC10511915 DOI: 10.1016/j.xpro.2023.102398] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 05/10/2023] [Accepted: 05/30/2023] [Indexed: 07/07/2023] Open
Abstract
Here, we present a protocol for the complete stereoselective synthesis of a molecular 51 knot. Enantiopure chiral ligands serve as the starting point, while Zn(OTf)2 acts as the template, facilitating the quantitative formation of pentameric circular helicates with 100% d.e. A subsequent sequence of ring-closing metathesis and demetalation steps transforms the structure into a fully organic 51 knot. This protocol expands the scope of strategies employed for chiral knot preparation and paves the way for more complex molecular topologies. For complete details on the use and execution of this protocol, please refer to Zhang et al.1.
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Affiliation(s)
- Jing Han
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Zekun Liu
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, East China Normal University, Shanghai 200062, P. R. China
| | - Raorao Yang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China
| | - Fan Yang
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, East China Normal University, Shanghai 200062, P. R. China
| | - Zhi-Hui Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China.
| | - Liang Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, P. R. China; Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, East China Normal University, Shanghai 200062, P. R. China.
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7
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The synthesis and near-infrared photothermal conversion of organometallic interdigitated complex and “U” type macrocycles. J SOLID STATE CHEM 2022. [DOI: 10.1016/j.jssc.2022.123521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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8
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Ashbridge Z, Fielden SDP, Leigh DA, Pirvu L, Schaufelberger F, Zhang L. Knotting matters: orderly molecular entanglements. Chem Soc Rev 2022; 51:7779-7809. [PMID: 35979715 PMCID: PMC9486172 DOI: 10.1039/d2cs00323f] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Indexed: 11/29/2022]
Abstract
Entangling strands in a well-ordered manner can produce useful effects, from shoelaces and fishing nets to brown paper packages tied up with strings. At the nanoscale, non-crystalline polymer chains of sufficient length and flexibility randomly form tangled mixtures containing open knots of different sizes, shapes and complexity. However, discrete molecular knots of precise topology can also be obtained by controlling the number, sequence and stereochemistry of strand crossings: orderly molecular entanglements. During the last decade, substantial progress in the nascent field of molecular nanotopology has been made, with general synthetic strategies and new knotting motifs introduced, along with insights into the properties and functions of ordered tangle sequences. Conformational restrictions imparted by knotting can induce allostery, strong and selective anion binding, catalytic activity, lead to effective chiral expression across length scales, binding modes in conformations efficacious for drug delivery, and facilitate mechanical function at the molecular level. As complex molecular topologies become increasingly synthetically accessible they have the potential to play a significant role in molecular and materials design strategies. We highlight particular examples of molecular knots to illustrate why these are a few of our favourite things.
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Affiliation(s)
- Zoe Ashbridge
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - David A Leigh
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
| | - Lucian Pirvu
- Department of Chemistry, The University of Manchester, Manchester, UK
| | | | - Liang Zhang
- Department of Chemistry, The University of Manchester, Manchester, UK
- School of Chemistry and Molecular Engineering, East China Normal University, 3663 N Zhongshan Road, Shanghai, China
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9
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Lei Y, Li Z, Wu G, Zhang L, Tong L, Tong T, Chen Q, Wang L, Ge C, Wei Y, Pan Y, Sue ACH, Wang L, Huang F, Li H. A trefoil knot self-templated through imination in water. Nat Commun 2022; 13:3557. [PMID: 35729153 PMCID: PMC9213439 DOI: 10.1038/s41467-022-31289-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 06/03/2022] [Indexed: 11/24/2022] Open
Abstract
The preparation of topologically nontrivial molecules is often assisted by covalent, supramolecular or coordinative templates that provide spatial pre-organization for all components. Herein, we report a trefoil knot that can be self-assembled efficiently in water without involving additional templates. The direct condensation of three equivalents of a tetraformyl precursor and six equivalents of a chiral diamine produces successfully a [3 + 6] trefoil knot whose intrinsic handedness is dictated by the stereochemical configuration of the diamine linkers. Contrary to the conventional wisdom that imine condensation is not amenable to use in water, the multivalent cooperativity between all the imine bonds within the framework makes this trefoil knot robust in the aqueous environment. Furthermore, the presence of water is proven to be essential for the trefoil knot formation. A topologically trivial macrocycle composed of two tetraformyl and four diamino building blocks is obtained when a similar reaction is performed in organic media, indicating that hydrophobic effect is a major driving force behind the scene.
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Affiliation(s)
- Ye Lei
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Zhaoyong Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310027, PR China
| | - Guangcheng Wu
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Lijie Zhang
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, Hangzhou, 311231, PR China
| | - Lu Tong
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Tianyi Tong
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, PR China
| | - Qiong Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Lingxiang Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Chenqi Ge
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Yuxi Wei
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Yuanjiang Pan
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China
| | - Andrew C-H Sue
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, PR China.
| | - Linjun Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310027, PR China.
| | - Feihe Huang
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, 310027, PR China.
| | - Hao Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, 310027, PR China.
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10
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Au-Yeung HY, Deng Y. Distinctive features and challenges in catenane chemistry. Chem Sci 2022; 13:3315-3334. [PMID: 35432874 PMCID: PMC8943846 DOI: 10.1039/d1sc05391d] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 02/04/2022] [Indexed: 11/21/2022] Open
Abstract
From being an aesthetic molecular object to a building block for the construction of molecular machines, catenanes and related mechanically interlocked molecules (MIMs) continue to attract immense interest in many research areas. Catenane chemistry is closely tied to that of rotaxanes and knots, and involves concepts like mechanical bonds, chemical topology and co-conformation that are unique to these molecules. Yet, because of their different topological structures and mechanical bond properties, there are some fundamental differences between the chemistry of catenanes and that of rotaxanes and knots although the boundary is sometimes blurred. Clearly distinguishing these differences, in aspects of bonding, structure, synthesis and properties, between catenanes and other MIMs is therefore of fundamental importance to understand their chemistry and explore the new opportunities from mechanical bonds.
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Affiliation(s)
- Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
- State Key Laboratory of Synthetic Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
| | - Yulin Deng
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
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11
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Zhang ZH, Andreassen BJ, August DP, Leigh DA, Zhang L. Molecular weaving. NATURE MATERIALS 2022; 21:275-283. [PMID: 35115722 DOI: 10.1038/s41563-021-01179-w] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 11/22/2021] [Indexed: 06/14/2023]
Abstract
Historically, the interlacing of strands at the molecular level has mainly been limited to coordination polymers and DNA. Despite being proposed on a number of occasions, the direct, bottom-up assembly of molecular building blocks into woven organic polymers remained an aspirational, but elusive, target for several decades. However, recent successes in two-dimensional and three-dimensional molecular-level weaving now offer new opportunities and research directions at the interface of polymer science and molecular nanotopology. This Perspective provides an overview of the features and potential of the periodic nanoscale weaving of polymer chains, distinguishing it from randomly entangled polymer networks and rigid crystalline frameworks. We review the background and experimental progress so far, and conclude by considering the potential of molecular weaving and outline some of the current and future challenges in this emerging field.
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Affiliation(s)
- Zhi-Hui Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China
| | | | - David P August
- Department of Chemistry, University of Manchester, Manchester, UK
| | - David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China.
- Department of Chemistry, University of Manchester, Manchester, UK.
| | - Liang Zhang
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China.
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12
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Dang LL, Li TT, Cui Z, Sui D, Ma LF, Jin GX. Selective construction and stability studies of a molecular trefoil knot and Solomon link. Dalton Trans 2021; 50:16984-16989. [PMID: 34612256 DOI: 10.1039/d1dt02755g] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Two novel compounds, a molecular trefoil knot and a Solomon link, were constructed successfully through the cooperation of multiple π-π stacking interactions. A reversible transformation between the trefoil knot and the corresponding [2 + 2] macrocycle could be achieved by solvent- and guest-induced effects. However, the Solomon link maintains its stability in different concentrations, solvents and guest molecules. Single-crystal X-ray crystallographic data, NMR spectroscopic experiments and ESI-MS support the synthesis and structural assignments. These synthesis methods open the door to the further development of smart materials, which will push the advancement of rational design of biomaterials.
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Affiliation(s)
- Li-Long Dang
- College of Chemistry and Chemical Engineering, Henan Province Function-Oriented Porous Materials Key Laboratory, Luoyang Normal University, Luoyang 471934, P. R. China.
| | - Ting-Ting Li
- College of Chemistry and Chemical Engineering, Henan Province Function-Oriented Porous Materials Key Laboratory, Luoyang Normal University, Luoyang 471934, P. R. China. .,College of Chemistry and Bioengineering (Guangxi Key Laboratory of Electrochemical and Magnetochemical Functional Materials), Guilin University of Technology, Guilin 541004, P. R. China
| | - Zheng Cui
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200438, P. R. China.
| | - Dong Sui
- College of Chemistry and Chemical Engineering, Henan Province Function-Oriented Porous Materials Key Laboratory, Luoyang Normal University, Luoyang 471934, P. R. China.
| | - Lu-Fang Ma
- College of Chemistry and Chemical Engineering, Henan Province Function-Oriented Porous Materials Key Laboratory, Luoyang Normal University, Luoyang 471934, P. R. China.
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200438, P. R. China.
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13
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Herasymchuk K, Allain M, MacNeil GA, Carré V, Aubriet F, Leznoff DB, Sallé M, Goeb S, Storr T. Exciton Coupling in Redox-Active Salen based Self-Assembled Metallacycles. Chemistry 2021; 27:16161-16172. [PMID: 34595790 DOI: 10.1002/chem.202102745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Indexed: 11/09/2022]
Abstract
The incorporation of a redox-active nickel salen complex into supramolecular structures was explored via coordination-driven self-assembly with homobimetallic ruthenium complexes (bridged by oxalato or 5,8-dihydroxy-1,4-naphthoquinato ligands). The self-assembly resulted in the formation of a discrete rectangle using the oxalato complex and either a rectangle or a catenane employing the larger naphthoquinonato complex. The formation of the interlocked self-assembly was determined to be solvent and concentration dependent. The electronic structure and stability of the oxidized metallacycles was probed using electrochemical experiments, UV-Vis-NIR absorption, EPR spectroscopy and DFT calculations, confirming ligand radical formation. Exciton coupling of the intense near-infrared (NIR) ligand radical intervalence charge transfer (IVCT) bands provided further confirmation of the geometric and electronic structures in solution.
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Affiliation(s)
| | - Magali Allain
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Gregory A MacNeil
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
| | - Vincent Carré
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Frédéric Aubriet
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Daniel B Leznoff
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
| | - Marc Sallé
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Sébastien Goeb
- Univ Angers, CNRS, MOLTECH-ANJOU, 2 bd Lavoisier, 49000, Angers, France) E-mails: E-mails
| | - Tim Storr
- Department of Chemistry, Simon Fraser University, Burnaby, V5A 1S6, Canada
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14
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Dekhtiarenko M, Pascal S, Elhabiri M, Mazan V, Canevet D, Allain M, Carré V, Aubriet F, Voitenko Z, Sallé M, Siri O, Goeb S. Reversible pH-Controlled Catenation of a Benzobisimidazole-Based Tetranuclear Rectangle. Chemistry 2021; 27:15922-15927. [PMID: 34478209 DOI: 10.1002/chem.202103039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Indexed: 11/09/2022]
Abstract
The development of methodologies to control on demand and reversibly supramolecular transformations from self-assembled metalla-structures requires the rational design of architectures able to answer to an applied stimulus. While solvent or concentration changes, light exposure or addition of a chemical have been largely explored to provide these transformations, the case of pH sensitive materials is less described. Herein, we report the first example of a pH-triggered dissociation of a coordination-driven self-assembled interlocked molecular link. It incorporates a pH sensitive benzobisimidazole-based ligand that can be selectively protonated on its bisimidazole moieties. This generates intermolecular electrostatic repulsions that reduces drastically the stability of the interlocked structure, leading to its dissociation without any sign of protonation of the pyridine moieties involved in the coordination bonds. Importantly, the dissociation process is reversible through addition of a base.
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Affiliation(s)
- Maksym Dekhtiarenko
- Univ Angers, CNRS, MOLTECH-Anjou, 2 bd Lavoisier, 49045, Angers, France.,Taras Shevchenko National University of Kyiv, 64/13 Volodymyrska st., Kyiv, 01033, Ukraine
| | - Simon Pascal
- Aix Marseille Univ, CNRS UMR 7325, Centre Interdisciplinaire de Nanoscience de Marseille (CINaM), Campus de Luminy, 13288, Marseille cedex 09, France
| | - Mourad Elhabiri
- Université de Strasbourg, Université de Haute-Alsace, CNRS, LIMA, UMR 7042, Equipe Chimie Bioorganique et Médicinale, ECPM, 25 Rue Becquerel, 67000, Strasbourg, France
| | - Valerie Mazan
- Université de Strasbourg, Université de Haute-Alsace, CNRS, LIMA, UMR 7042, Equipe Chimie Bioorganique et Médicinale, ECPM, 25 Rue Becquerel, 67000, Strasbourg, France
| | - David Canevet
- Univ Angers, CNRS, MOLTECH-Anjou, 2 bd Lavoisier, 49045, Angers, France
| | - Magali Allain
- Univ Angers, CNRS, MOLTECH-Anjou, 2 bd Lavoisier, 49045, Angers, France
| | - Vincent Carré
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Frédéric Aubriet
- LCP-A2MC, FR 3624, Université de Lorraine, ICPM, 1 Bd Arago, 57078, Metz Cedex 03, France
| | - Zoia Voitenko
- Taras Shevchenko National University of Kyiv, 64/13 Volodymyrska st., Kyiv, 01033, Ukraine
| | - Marc Sallé
- Univ Angers, CNRS, MOLTECH-Anjou, 2 bd Lavoisier, 49045, Angers, France
| | - Olivier Siri
- Aix Marseille Univ, CNRS UMR 7325, Centre Interdisciplinaire de Nanoscience de Marseille (CINaM), Campus de Luminy, 13288, Marseille cedex 09, France
| | - Sébastien Goeb
- Univ Angers, CNRS, MOLTECH-Anjou, 2 bd Lavoisier, 49045, Angers, France
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15
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Gao X, Cui Z, Shen YR, Liu D, Lin YJ, Jin GX. Synthesis and Near-Infrared Photothermal Conversion of Discrete Supramolecular Topologies Featuring Half-Sandwich [Cp*Rh] Units. J Am Chem Soc 2021; 143:17833-17842. [PMID: 34641681 DOI: 10.1021/jacs.1c09333] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Although a large number of novel supramolecular topologies featuring half-sandwich [Cp*Rh] units have been reported, investigations into the properties of these architectures are astoundingly rare. In addition, the bidentate ligands employed to prepare these species have remained relatively homogeneous (i.e., symmetrical bis(pyri-4-dyl) ligands). To address these paucities in the field, the novel unsymmetrical ligand L2 and the rarely reported pyri-3-dyl ligand L3, all bearing aromatic phenazine groups (an N-heterocyclic analog of anthracene), were synthesized in addition to the common symmetrical pyri-4-dyl L1. [3]Catenane, [2]catenane, and Borromean rings assemblies were constructed successfully by the self-assembly of L1 with different building blocks. Afterward, ligand L2 was applied to prepare two novel molecular-tweezer-like compounds. Lastly, a twisted [2]catenane (relative to the [2]catenane constructed using L1) and a sandwiched metallarectangle were obtained using L3. π-π stacking interactions were observed to play a significant role in stabilizing these topologies, which also promoted nonradiative migration and triggered photothermal conversion in both the solution and the solid state. In the solution state, a clear rule of thumb was derived whereby the NIR photothermal conversion efficiency increased as the π-π stacking increased, and a very high photothermal conversion efficiency (35.5-62.4%) was observed. In addition, this family of half-sandwich-based assemblies also exhibited good photothermal conversion properties in the crystalline and noncrystal powder states. This research provides a novel method to synthesize excellent NIR photothermal conversion materials featuring half-sandwich [Cp*Rh] units and points to potential applications in the near future.
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Affiliation(s)
- Xiang Gao
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
| | - Zheng Cui
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
| | - Yue-Rong Shen
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
| | - Dong Liu
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
| | - Yue-Jian Lin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
| | - Guo-Xin Jin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, P. R. China
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16
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Shen Y, Gao X, Cui Z, Jin G. Rational Design and Synthesis of Interlocked [2]Catenanes Featuring
Half‐Sandwich
Cp*Rh/Ir Units and
Pyrene‐Based
Ligands
†. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100546] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Yue‐Rong Shen
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers Fudan University Shanghai 200438 China
| | - Xiang Gao
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers Fudan University Shanghai 200438 China
| | - Zheng Cui
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers Fudan University Shanghai 200438 China
| | - Guo‐Xin Jin
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers Fudan University Shanghai 200438 China
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17
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Redox-active ligands: Recent advances towards their incorporation into coordination polymers and metal-organic frameworks. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.213891] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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18
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Carpenter JP, McTernan CT, Greenfield JL, Lavendomme R, Ronson TK, Nitschke JR. Controlling the shape and chirality of an eight-crossing molecular knot. Chem 2021. [DOI: 10.1016/j.chempr.2021.03.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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19
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Schäfer B, Suryadevara N, Greisch J, Fuhr O, Kappes MM, Ruben M. Ditopic Hexadentate Ligands with a Central Dihydrobenzo‐diimidazole Unit Forming a [2x2] Zn
4
Grid Complex. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100230] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Bernhard Schäfer
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
| | - Nithin Suryadevara
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
| | - Jean‐Francois Greisch
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
| | - Olaf Fuhr
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
- Karlsruhe Nano Micro Facility (KNMF) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
| | - Manfred M. Kappes
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
- Institute of Physical Chemistry (IPC) Karlsruhe Institute of Technology (KIT) Fritz-Haber Weg 2, G 30.44 76131 Karlsruhe Germany
| | - Mario Ruben
- Institute of Nanotechnology (INT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
- Institute of Quantum Materials and Technologies (IQMT) Karlsruhe Institute of Technology (KIT) Hermann-von-Helmholtz-Platz 1 76344 Eggenstein-Leopoldshafen Germany
- Centre Européen de Sciences Quantiques (CESQ) in the Institut de Science et d'Ingénierie Supramoléculaires (ISIS) 8 allée Gaspard Monge, BP 70028, 67083 Strasbourg Cedex France
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20
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Leigh DA, Danon JJ, Fielden SDP, Lemonnier JF, Whitehead GFS, Woltering SL. A molecular endless (7 4) knot. Nat Chem 2021; 13:117-122. [PMID: 33318672 DOI: 10.1038/s41557-020-00594-x] [Citation(s) in RCA: 59] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 10/23/2020] [Indexed: 01/30/2023]
Abstract
Current strategies for the synthesis of molecular knots focus on twisting, folding and/or threading molecular building blocks. Here we report that Zn(II) or Fe(II) ions can be used to weave ligand strands to form a woven 3 × 3 molecular grid. We found that the process requires tetrafluoroborate anions to template the assembly of the interwoven grid by binding within the square cavities formed between the metal-coordinated criss-crossed ligands. The strand ends of the grid can subsequently be joined through within-grid alkene metathesis reactions to form a topologically trivial macrocycle (unknot), a doubly interlocked [2]catenane (Solomon link) and a knot with seven crossings in a 258-atom-long closed loop. This 74 knot topology corresponds to that of an endless knot, which is a basic motif of Celtic interlace, the smallest Chinese knot and one of the eight auspicious symbols of Buddhism and Hinduism. The weaving of molecular strands within a discrete layer by anion-template metal-ion coordination opens the way for the synthesis of other molecular knot topologies and to woven polymer materials.
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Affiliation(s)
- David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China. .,Department of Chemistry, University of Manchester, Manchester, UK.
| | - Jonathan J Danon
- Department of Chemistry, University of Manchester, Manchester, UK
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21
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Non‐Covalent Interaction‐Directed Coordination‐Driven Self‐Assembly of Non‐Trivial Supramolecular Topologies. CHEM REC 2021; 21:574-593. [DOI: 10.1002/tcr.202000155] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Revised: 12/22/2020] [Accepted: 01/11/2021] [Indexed: 11/07/2022]
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22
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August DP, Jaramillo-Garcia J, Leigh DA, Valero A, Vitorica-Yrezabal IJ. A Chiral Cyclometalated Iridium Star of David [2]Catenane. J Am Chem Soc 2021; 143:1154-1161. [DOI: 10.1021/jacs.0c12038] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- David P. August
- Department of Chemistry, University of Manchester, Manchester M13 9PL, United Kingdom
| | | | - David A. Leigh
- Department of Chemistry, University of Manchester, Manchester M13 9PL, United Kingdom
| | - Alberto Valero
- Department of Chemistry, University of Manchester, Manchester M13 9PL, United Kingdom
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23
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Hähsler M, Mastalerz M. A Giant [8+12] Boronic Ester Cage with 48 Terminal Alkene Units in the Periphery for Postsynthetic Alkene Metathesis. Chemistry 2021; 27:233-237. [PMID: 32840913 PMCID: PMC7839526 DOI: 10.1002/chem.202003675] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Revised: 08/24/2020] [Indexed: 11/21/2022]
Abstract
Dynamic covalent chemistry (DCC) is a powerful synthetic tool to construct large defined molecules in one step from rather simple precursors. The advantage of the intrinsic dynamics of the applied reversible reaction steps is a self‐correction under the chosen conditions, to achieve high yields of the target compound. To date, only a few examples are known, in which DCC was used to build up a molecular defined but larger product that was chemically transferred to a more stable congener in a second (irreversible) step. Here, we present a nanometer‐sized [8+12] boronic ester cage containing 48 peripheral terminal alkene units which allows to put a hydrocarbon exoskeleton around the cage via alkene metathesis.
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Affiliation(s)
- Martin Hähsler
- Institute of Organic Chemistry, Heidelberg University, Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Michael Mastalerz
- Institute of Organic Chemistry, Heidelberg University, Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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24
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Gao X, Cui Z, Lin YJ, Jin GX. Construction of organometallic trefoil knots and one-dimensional chains featuring half-sandwich Cp*Rh corner units and an abnormal zwitterion ligand. Org Chem Front 2021. [DOI: 10.1039/d0qo01279c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
An abnormal flexible O-coordinated zwitterion ligand L shows self-adaptive conformation behaviour in chemical self-assembly. Two trefoil knots were obtained with C-shaped ligand L and two novel 1D chains were obtained with Z-shaped ligand L.
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Affiliation(s)
- Xiang Gao
- Department of Chemistry
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Fudan University
- Shanghai 200438
| | - Zheng Cui
- Department of Chemistry
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Fudan University
- Shanghai 200438
| | - Yue-Jian Lin
- Department of Chemistry
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Fudan University
- Shanghai 200438
| | - Guo-Xin Jin
- Department of Chemistry
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- State Key Laboratory of Molecular Engineering of Polymers
- Fudan University
- Shanghai 200438
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25
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26
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Cui Z, Lu Y, Gao X, Feng HJ, Jin GX. Stereoselective Synthesis of a Topologically Chiral Solomon Link. J Am Chem Soc 2020; 142:13667-13671. [DOI: 10.1021/jacs.0c05366] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Zheng Cui
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200433, People’s Republic of China
| | - Ye Lu
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200433, People’s Republic of China
| | - Xiang Gao
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200433, People’s Republic of China
| | - Hui-Jun Feng
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200433, People’s Republic of China
| | - Guo-Xin Jin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200433, People’s Republic of China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, People’s Republic of China
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27
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Wang J, Zhao H, Chen M, Jiang Z, Wang F, Liu D, Jiang Z, Xie TZ, Zhang Z, Wang P. A parallelogram metallomacrocycle bearing self-catenation and its derivative supramolecular isomerism. Chem Commun (Camb) 2020; 56:8444-8447. [PMID: 32583836 DOI: 10.1039/d0cc02877k] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Macrocycle-based architectures are of importance in synthetic chemistry. Here, a novel parallelogram metallomacrocycle Fe2(LA)2 with reversible structural transformation was designed and synthesized. The template-free metalla[2]catenane [Fe2(LA)2]2 could be obtained by changing the concentration and has been monitored on the basis of NMR analysis. By redesigning the metallo-ligand, a catenane-like intersected parallelogram assembly with two shape-persistent supramolecular isomers was achieved. This work develops the field of terpyridine-based macrocycle system research and is valuable for obtaining other types of supramolecular isomerism.
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Affiliation(s)
- Jun Wang
- Department of Organic and Polymer Chemistry, Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China.
| | - He Zhao
- Department of Organic and Polymer Chemistry, Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China.
| | - Mingzhao Chen
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
| | - Zhiyuan Jiang
- Department of Organic and Polymer Chemistry, Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China.
| | - Feng Wang
- Department of Organic and Polymer Chemistry, Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China.
| | - Die Liu
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
| | - Zhilong Jiang
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
| | - Ting-Zheng Xie
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
| | - Zhe Zhang
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
| | - Pingshan Wang
- Department of Organic and Polymer Chemistry, Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China. and Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education, Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China.
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28
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Gao WX, Feng HJ, Guo BB, Lu Y, Jin GX. Coordination-Directed Construction of Molecular Links. Chem Rev 2020; 120:6288-6325. [PMID: 32558562 DOI: 10.1021/acs.chemrev.0c00321] [Citation(s) in RCA: 165] [Impact Index Per Article: 41.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Since the emergence of the concept of chemical topology, interlocked molecular assemblies have graduated from academic curiosities and poorly defined species to become synthetic realities. Coordination-directed synthesis provides powerful, diverse, and increasingly sophisticated protocols for accessing interlocked molecules. Originally, metal ions were employed solely as templates to gather and position building blocks in entwined or threaded arrangements. Recently, metal centers have increasingly featured within the backbones of the integral structural elements, which in turn use noncovalent interactions to self-assemble into intricate topologies. By outlining ingenious recent examples as well as seminal classic cases, this Review focuses on the role of metal-ligand paradigms in assembling molecular links. In addition, the ever-evolving approaches to efficient assembly, the structural features of the resulting architectures, and their prospects for the future are also presented.
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Affiliation(s)
- Wen-Xi Gao
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Hui-Jun Feng
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Bei-Bei Guo
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Ye Lu
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
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29
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Gao X, Guo BB, Dang LL, Jin GX. A template-free strategy for the synthesis of highly stable trefoil knots. J Organomet Chem 2020. [DOI: 10.1016/j.jorganchem.2020.121172] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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30
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Development of functional molecular assemblies based on programmable construction of face-to-face assemblies of metallo-porphyrinoids. J INCL PHENOM MACRO 2020. [DOI: 10.1007/s10847-019-00969-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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31
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Feng H, Gao W, Lin Y, Jin G. Dynamic Interconversion between Solomon Link and Trapezoidal Metallacycle Ensembles Accompanying Conformational Change of the Linker. Chemistry 2019; 25:15687-15693. [DOI: 10.1002/chem.201904196] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Revised: 09/25/2019] [Indexed: 12/14/2022]
Affiliation(s)
- Hui‐Jun Feng
- State Key Laboratory of Molecular Engineering of PolymersDepartment of ChemistryFudan University Shanghai 200433 P. R. China
| | - Wen‐Xi Gao
- State Key Laboratory of Molecular Engineering of PolymersDepartment of ChemistryFudan University Shanghai 200433 P. R. China
| | - Yue‐Jian Lin
- State Key Laboratory of Molecular Engineering of PolymersDepartment of ChemistryFudan University Shanghai 200433 P. R. China
| | - Guo‐Xin Jin
- State Key Laboratory of Molecular Engineering of PolymersDepartment of ChemistryFudan University Shanghai 200433 P. R. China
- State Key Laboratory of Organometallic ChemistryShanghai Institute of Organic ChemistryChinese Academy of Science Shanghai 200032 P. R. China
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32
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Evaluation of the stereoselectivity for titanium(IV)-based coordination entities induced by the enantiopure diphenylethene-1,2-diamine ligand. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.119119] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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33
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Celaya CA, Salcedo R, Sansores LE. Molecular knot with nine crossings: Structure and electronic properties from density functional theory computation. J Mol Graph Model 2019; 94:107481. [PMID: 31671365 DOI: 10.1016/j.jmgm.2019.107481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Revised: 10/17/2019] [Accepted: 10/17/2019] [Indexed: 11/27/2022]
Abstract
The electronic structure of a molecule with nine-crossing composite knots 973 link denoted by the Alexander-Briggs notation (complex-1) are studied by means of theoretical methods (DFT). The most interesting feature of this kind of molecules is their capability to capture anion spices inside the cage. Stability and chemical reactivity were evaluated taking advantage of the criteria chemical hardness and chemical potential. The simulation of the infrared spectra is also included and shows the characteristic signal of the molecule in a range 1000-1600 cm-1. The frontier molecular orbitals were also analyzed. Whereas the capability to capture chlorine ion into the cavity of the complex-1 is explored by means the analysis of bond energy. Also, the electron density distribution of the chlorine complex was studied by means the quantum theory of atoms in molecules (QTAIM) formalism in order to stablish its bonding properties as well as the electron transfer between chlorine ion and complex-1 which was approached by the natural bonding orbital (NBO) and Hirshfeld charge. Ours results revels semiconductor behaviors for both compounds.
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Affiliation(s)
- Christian A Celaya
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico.
| | - Roberto Salcedo
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico
| | - Luis Enrique Sansores
- Departamento de Materiales de Baja Dimensionalidad, Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Circuito Exterior S/n, Ciudad Universitaria, CP 04510, Coyoacán, Ciudad de México, Mexico
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34
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Zhang HN, Gao WX, Lin YJ, Jin GX. Reversible Structural Transformation between a Molecular Solomon Link and an Unusual Unsymmetrical Trefoil Knot. J Am Chem Soc 2019; 141:16057-16063. [DOI: 10.1021/jacs.9b08254] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Wen-Xi Gao
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
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35
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Zhong J, Zhang L, August DP, Whitehead GFS, Leigh DA. Self-Sorting Assembly of Molecular Trefoil Knots of Single Handedness. J Am Chem Soc 2019; 141:14249-14256. [PMID: 31389229 DOI: 10.1021/jacs.9b06127] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We report on the stereoselective synthesis of trefoil knots of single topological handedness in up to 90% yield (over two steps) through the formation of trimeric circular helicates from ligand strands containing either imine or, unexpectedly, amide chelating units and metal ion templates of the appropriate coordination character (zinc(II) for imines; cobalt(III) for amides). The coordination stereochemistry of the octahedral metal complexes is determined by asymmetric carbon centers in the strands, ultimately translating into trefoil knots that are a single enantiomer, both physically and in terms of their fundamental topology. Both the imine-zinc and amide-cobalt systems display self-sorting behavior, with racemic ligands forming knots that individually contain only building blocks of the same chirality. The knots and the corresponding trimeric circular helicate intermediates (Zn(II)3 complex for the imine ligands; Co(III)3 complex for the amide ligands) were characterized by nuclear magnetic resonance spectroscopy, mass spectrometry, and X-ray crystallography. The latter confirms the trefoil knots as 84-membered macrocycles, with each of the metal ions sited at a crossing point for three regions of the strand. The stereochemistry of the octahedral coordination centers imparts alternating crossings of the same handedness within each circular helicate. The expression of chirality of the knotted molecules was probed by circular dichroism: The topological handedness of the demetalated knots was found to have a greater effect on the CD response than the Euclidean chirality of an individual chiral center.
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Affiliation(s)
- Jiankang Zhong
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - Liang Zhang
- School of Chemistry and Molecular Engineering , East China Normal University , 200062 Shanghai , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - David P August
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - George F S Whitehead
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - David A Leigh
- School of Chemistry and Molecular Engineering , East China Normal University , 200062 Shanghai , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
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36
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Lu J, Montigaud V, Cador O, Wu J, Zhao L, Li XL, Guo M, Le Guennic B, Tang J. Lanthanide(III) Hexanuclear Circular Helicates: Slow Magnetic Relaxation, Toroidal Arrangement of Magnetic Moments, and Magnetocaloric Effects. Inorg Chem 2019; 58:11903-11911. [DOI: 10.1021/acs.inorgchem.9b01068] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Jingjing Lu
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
- School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei 230026, P. R. China
| | - Vincent Montigaud
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000 Rennes, France
| | - Olivier Cador
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000 Rennes, France
| | - Jianfeng Wu
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
| | - Lang Zhao
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
| | - Xiao-Lei Li
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
| | - Mei Guo
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
| | - Boris Le Guennic
- Univ Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes) - UMR 6226, F-35000 Rennes, France
| | - Jinkui Tang
- State Key Laboratory of Rare Earth Resource Utilization, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun 130022, P. R. China
- School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei 230026, P. R. China
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37
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Leigh DA, Pirvu L, Schaufelberger F. Stereoselective Synthesis of Molecular Square and Granny Knots. J Am Chem Soc 2019; 141:6054-6059. [PMID: 30892025 PMCID: PMC6492950 DOI: 10.1021/jacs.9b01819] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
![]()
We
report on the stereoselective synthesis of both molecular granny
and square knots through the use of lanthanide-complexed overhand
knots of specific handedness as three-crossing “entanglement
synthons”. The composite knots are assembled by combining two
entanglement synthons (of the same chirality for a granny knot; of
opposite handedness for a square knot) in three synthetic steps: first,
a CuAAC reaction joins together one end of each overhand knot. Ring-closing
olefin metathesis (RCM) then affords the closed-loop knot, locking
the topology. This allows the lanthanide ions necessary for stabilizing
the entangled conformation of the synthons to subsequently be removed.
The composite knots were characterized by 1H and 13C NMR spectroscopy and mass spectrometry and the chirality of the
knot stereoisomers compared by circular dichroism. The synthetic strategy
of combining building blocks of defined stereochemistry (here overhand
knots of Λ- or Δ-handed entanglement) is reminiscent of
the chiron approach of using minimalist chiral synthons in the stereoselective
synthesis of molecules with multiple asymmetric centers.
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Affiliation(s)
- David A Leigh
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
| | - Lucian Pirvu
- School of Chemistry , University of Manchester , Oxford Road , Manchester M13 9PL , U.K
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38
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Huang J, Liu D, Wang SC, Chen M, Zhao H, Li K, Chan YT, Wang P. Molecular Lemniscates from Organic-Metal Terpyridine-Based Self-Assembly and Host-Guest Recognition. Inorg Chem 2019; 58:5051-5057. [PMID: 30920813 DOI: 10.1021/acs.inorgchem.9b00119] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The intricate discrete supramolecular architectures via two or more noncovalent interactions are very attractive for chemists. In this paper, a series of homomeric metallo-supramolecular lemniscates were prepared in nearly quantitative yields by assembling either dialkylammonium salt- or benzo-21-crown-7 (B21C7)-containing terpyridyl metallo-organic ligands with Zn2+. Furthermore, the heteromeric analogue could be obtained through two ways: (1) the cooperative interaction of coordination-driven self-assembly and host-guest recognition and (2) the transformation from homodimers to heterodimers driven by host-guest interaction. These supramolecules were characterized by nuclear magnetic resonance (NMR), diffusion-ordered NMR spectroscopy, electrospray ionization mass spectrometry, and two-dimensional (2D) ion-mobility mass spectrometry.
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Affiliation(s)
- Jian Huang
- Department of Organic and Polymer Chemistry, College of Chemistry and Chemical Engineering , Central South University , Changsha , Hunan 410083 , China
| | - Die Liu
- Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education , Guangzhou University , Guangzhou 510006 , China
| | - Shi-Cheng Wang
- Department of Chemistry , National Taiwan University , Number 1, Section 4, Roosevelt Road , Taipei 10617 , Taiwan
| | - Mingzhao Chen
- Department of Organic and Polymer Chemistry, College of Chemistry and Chemical Engineering , Central South University , Changsha , Hunan 410083 , China
| | - He Zhao
- Department of Organic and Polymer Chemistry, College of Chemistry and Chemical Engineering , Central South University , Changsha , Hunan 410083 , China
| | - Kaixiu Li
- Department of Organic and Polymer Chemistry, College of Chemistry and Chemical Engineering , Central South University , Changsha , Hunan 410083 , China
| | - Yi-Tsu Chan
- Department of Chemistry , National Taiwan University , Number 1, Section 4, Roosevelt Road , Taipei 10617 , Taiwan
| | - Pingshan Wang
- Department of Organic and Polymer Chemistry, College of Chemistry and Chemical Engineering , Central South University , Changsha , Hunan 410083 , China.,Institute of Environmental Research at Greater Bay Area, Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education , Guangzhou University , Guangzhou 510006 , China
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39
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Zhang L, Stephens AJ, Lemonnier JF, Pirvu L, Vitorica-Yrezabal IJ, Robinson CJ, Leigh DA. Coordination Chemistry of a Molecular Pentafoil Knot. J Am Chem Soc 2019; 141:3952-3958. [PMID: 30742430 PMCID: PMC6438588 DOI: 10.1021/jacs.8b12548] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
The binding of Zn(II) cations to
a pentafoil (51) knotted
ligand allows the synthesis of otherwise inaccessible metalated molecular
pentafoil knots via transmetalation, affording the corresponding “first-sphere”
coordination Co(II), Ni(II), and Cu(II) pentanuclear knots in good
yields (≥85%). Each of the knot complexes was characterized
by mass spectrometry, the diamagnetic (zinc) knot complex was characterized
by 1H and 13C NMR spectroscopy, and the zinc,
cobalt, and nickel pentafoil knots afforded single crystals whose
structures were determined by X-ray crystallography. Lehn-type circular
helicates generally only form with tris-bipy ligand strands and Fe(II)
(and, in some cases, Ni(II) and Zn(II)) salts, so such architectures
become accessible for other metal cations only through the use of
knotted ligands. The different metalated knots all exhibit “second-sphere”
coordination of a single chloride ion within the central cavity of
the knot through CH···Cl– hydrogen
bonding and electrostatic interactions. The chloride binding affinities
were determined in MeCN by isothermal titration calorimetry, and the
strength of binding was shown to vary over 3 orders of magnitude for
the different metal-ion–knotted-ligand second-sphere coordination
complexes.
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Affiliation(s)
- Liang Zhang
- School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | - Alexander J Stephens
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | | | - Lucian Pirvu
- School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
| | | | - Christopher J Robinson
- SYNBIOCHEM, Manchester Institute of Biotechnology , University of Manchester , Manchester M1 7DN , United Kingdom
| | - David A Leigh
- School of Chemistry and Molecular Engineering , East China Normal University , Shanghai 200062 , China.,School of Chemistry , University of Manchester , Manchester M13 9PL , United Kingdom
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40
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Yee CC, Ng AWH, Au-Yeung HY. Control over the macrocyclisation pathway and product topology in a copper-templated catenane synthesis. Chem Commun (Camb) 2019; 55:6169-6172. [DOI: 10.1039/c9cc02263e] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Strategies to control building block intertwining and the efficient assembly of a linear [4]catenane are presented.
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Affiliation(s)
- Chi-Chung Yee
- Department of Chemistry
- The University of Hong Kong
- P. R. China
| | | | - Ho Yu Au-Yeung
- Department of Chemistry
- The University of Hong Kong
- P. R. China
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41
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Jinks MA, de Juan A, Denis M, Fletcher CJ, Galli M, Jamieson EMG, Modicom F, Zhang Z, Goldup SM. Stereoselective Synthesis of Mechanically Planar Chiral Rotaxanes. Angew Chem Int Ed Engl 2018; 57:14806-14810. [PMID: 30253008 PMCID: PMC6220991 DOI: 10.1002/anie.201808990] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2018] [Indexed: 01/14/2023]
Abstract
Chiral interlocked molecules in which the mechanical bond provides the sole stereogenic unit are typically produced with no control over the mechanical stereochemistry. Here we report a stereoselective approach to mechanically planar chiral rotaxanes in up to 98:2 d.r. using a readily available α-amino acid-derived azide. Symmetrization of the covalent stereocenter yields a rotaxane in which the mechanical bond provides the only stereogenic element.
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Affiliation(s)
- Michael A. Jinks
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | - Alberto de Juan
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | - Mathieu Denis
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | | | - Marzia Galli
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | | | - Florian Modicom
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
| | - Zhihui Zhang
- ChemistryUniversity of Southampton, HighfieldSouthamptonSO17 1BJUK
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42
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Jinks MA, de Juan A, Denis M, Fletcher CJ, Galli M, Jamieson EMG, Modicom F, Zhang Z, Goldup SM. Stereoselective Synthesis of Mechanically Planar Chiral Rotaxanes. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201808990] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Michael A. Jinks
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | - Alberto de Juan
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | - Mathieu Denis
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | | | - Marzia Galli
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | | | - Florian Modicom
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | - Zhihui Zhang
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
| | - Stephen M. Goldup
- Chemistry; University of Southampton, Highfield; Southampton SO17 1BJ UK
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43
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Danon JJ, Leigh DA, Pisano S, Valero A, Vitorica‐Yrezabal IJ. A Six-Crossing Doubly Interlocked [2]Catenane with Twisted Rings, and a Molecular Granny Knot. Angew Chem Int Ed Engl 2018; 57:13833-13837. [PMID: 30152565 PMCID: PMC6221036 DOI: 10.1002/anie.201807135] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2018] [Revised: 08/13/2018] [Indexed: 11/17/2022]
Abstract
A molecular 6 2 3 link (a six crossing, doubly interlocked, [2]catenane with twisted rings) and a 31 #31 granny knot (a composite knot made up of two trefoil tangles of the same handedness) were constructed by ring-closing olefin metathesis of an iron(II)-coordinated 2×2 interwoven grid. The connections were directed by pendant phenyl groups to be between proximal ligand ends on the same faces of the grid. The 6 2 3 link was separated from the topoisomeric granny knot by recycling size-exclusion chromatography. The identity of each topoisomer was determined by tandem mass spectrometry and the structure of the 6 2 3 link confirmed by X-ray crystallography, which revealed two 82-membered macrocycles, each in figure-of-eight conformations, linked through both pairs of loops.
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Affiliation(s)
- Jonathan J. Danon
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | - David A. Leigh
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | - Simone Pisano
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
| | - Alberto Valero
- School of ChemistryUniversity of ManchesterOxford RoadManchesterM13 9PLUK
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44
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Danon JJ, Leigh DA, Pisano S, Valero A, Vitorica‐Yrezabal IJ. A Six‐Crossing Doubly Interlocked [2]Catenane with Twisted Rings, and a Molecular Granny Knot. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201807135] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Jonathan J. Danon
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | - David A. Leigh
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | - Simone Pisano
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
| | - Alberto Valero
- School of ChemistryUniversity of Manchester Oxford Road Manchester M13 9PL UK
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45
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Zhang L, Stephens AJ, Nussbaumer AL, Lemonnier JF, Jurček P, Vitorica-Yrezabal IJ, Leigh DA. Stereoselective synthesis of a composite knot with nine crossings. Nat Chem 2018; 10:1083-1088. [DOI: 10.1038/s41557-018-0124-6] [Citation(s) in RCA: 90] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2018] [Accepted: 07/20/2018] [Indexed: 01/10/2023]
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46
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Dehkordi ME, Luxami V, Pantoş GD. High-Yielding Synthesis of Chiral Donor–Acceptor Catenanes. J Org Chem 2018; 83:11654-11660. [DOI: 10.1021/acs.joc.8b01629] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
| | - Vijay Luxami
- Department of Chemistry, University of Bath, Calverton Down, Bath BA27AY, U.K
| | - G. Dan Pantoş
- Department of Chemistry, University of Bath, Calverton Down, Bath BA27AY, U.K
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47
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Marenda M, Orlandini E, Micheletti C. Discovering privileged topologies of molecular knots with self-assembling models. Nat Commun 2018; 9:3051. [PMID: 30076306 PMCID: PMC6076300 DOI: 10.1038/s41467-018-05413-z] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 07/03/2018] [Indexed: 11/09/2022] Open
Abstract
Despite the several available strategies to build complex supramolecular constructs, only a handful of different molecular knots have been synthesised so far. Here, in response to the quest for further designable topologies, we use Monte Carlo sampling and molecular dynamics simulations, informed by general principles of supramolecular assembly, as a discovery tool for thermodynamically and kinetically accessible knot types made of helical templates. By combining this approach with the exhaustive enumeration of molecular braiding patterns applicable to more general template geometries, we find that only few selected shapes have the closed, symmetric and quasi-planar character typical of synthetic knots. The corresponding collection of admissible topologies is extremely restricted. It covers all known molecular knots but it especially includes a limited set of novel complex ones that have not yet been obtained experimentally, such as 10124 and 15n41185, making them privileged targets for future self-assembling experiments.
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Affiliation(s)
- Mattia Marenda
- SISSA, International School for Advanced Studies, via Bonomea 265, I-34136, Trieste, Italy
| | - Enzo Orlandini
- Dipartimento di Fisica e Astronomia "Galileo Galilei", sezione INFN, Università degli Studi di Padova, via Marzolo 8, I-35131, Padova, Italy
| | - Cristian Micheletti
- SISSA, International School for Advanced Studies, via Bonomea 265, I-34136, Trieste, Italy.
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48
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Jamieson EMG, Modicom F, Goldup SM. Chirality in rotaxanes and catenanes. Chem Soc Rev 2018; 47:5266-5311. [PMID: 29796501 PMCID: PMC6049620 DOI: 10.1039/c8cs00097b] [Citation(s) in RCA: 183] [Impact Index Per Article: 30.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Indexed: 12/20/2022]
Abstract
Although chiral mechanically interlocked molecules (MIMs) have been synthesised and studied, enantiopure examples are relatively under-represented in the pantheon of reported catenanes and rotaxanes and the underlying chirality of the system is often even overlooked. This is changing with the advent of new applications of MIMs in catalysis, sensing and materials and the appearance of new methods to access unusual stereogenic units unique to the mechanical bond. Here we discuss the different stereogenic units that have been investigated in catenanes and rotaxanes, examples of their application, methods for assigning absolute stereochemistry and provide a perspective on future developments.
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Affiliation(s)
- E. M. G. Jamieson
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
| | - F. Modicom
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
| | - S. M. Goldup
- Chemistry
, University of Southampton
,
University Road, Highfield
, Southampton
, SO17 1BJ
, UK
.
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49
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Shiga T, Newton GN, Oshio H. Pre-programmed self-assembly of polynuclear clusters. Dalton Trans 2018; 47:7384-7394. [PMID: 29667675 DOI: 10.1039/c8dt00822a] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
This perspective reviews our recent efforts towards the self-assembly of polynuclear clusters with ditopic and tritopic multidentate ligands HL1 (2-phenyl-4,5-bis{6-(3,5-dimethylpyrazol-1-yl)pyrid-2-yl}-1H-imidazole) and H2L2 (2,6-bis-[5-(2-pyridinyl)-1H-pyrazole-3-yl]pyridine), both of which are planar and rigid molecules. HL1 was found to be an excellent support for tetranuclear [Fe4] complexes, [FeII4(L1)4](BF4)4 ([FeII4]) and [FeIII2FeII2(L1)4](BF4)6 ([FeIII2FeII2]). The homovalent system was found to exhibit multistep spin crossover (SCO), while the mixed-valence [FeIII2FeII2] complex shows wavelength-dependent tuneable light-induced excited spin state trapping (LIESST). For H2L2, a variety of polynuclear complexes were obtained through complexation with different transition metal ions, allowing the isolation of rings, grids, and helix structures. The rigidity of the ligand, difference in its coordination sites, and affinity for different metal ions dictates its coordination behaviour. In this paper, we summarise these ligand pre-programmed self-assembled clusters and their diverse physical properties.
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Affiliation(s)
- Takuya Shiga
- Department of Chemistry, Graduate School of Pure and Applied Sciences, University of Tsukuba, Tennodai 1-1-1, Tsukuba 305-8571, Japan.
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50
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Liu Y, Yaghi OM. Metal coordination as a template strategy to make resilient woven materials. ACTA ACUST UNITED AC 2018. [DOI: 10.4019/bjscc.71.12] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Affiliation(s)
- Yuzhong Liu
- Department of Chemistry, University of California-Berkeley
| | - Omar M. Yaghi
- Department of Chemistry, University of California-Berkeley
- King Abdulaziz City for Science and Technology
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