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Chen Y, Renson S, Monbaliu JM. On Demand Flow Platform for the Generation of Anhydrous Dinitrogen Trioxide and Its Further Use in N-Nitrosative Reactions. Angew Chem Int Ed Engl 2022; 61:e202210146. [PMID: 35971898 PMCID: PMC9825874 DOI: 10.1002/anie.202210146] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Indexed: 01/11/2023]
Abstract
Dinitrogen trioxide (N2 O3 ) is a powerful and efficient nitrosating agent that comes with an unprecedented atom economy. However, the synthetic application of N2 O3 is still underdeveloped mostly due to its inherent instability and the lack of reliable protocols for its preparation. This paper presents an open-source setup and procedure for the on-demand generation of anhydrous N2 O3 solution (up to 1 M), which can be further used for reactions under batch and flow conditions. The accuracy and stability of N2 O3 concentration are guaranteed with the absence of head-space in the setup and with the synchronization of the gas flows. The reliability of this protocol is demonstrated by >30 worked examples in the nitrosative synthesis of heterocycles-a library of structurally diverse benzotriazoles and sydnones. Kinetic and mechanistic aspects of the N-nitrosative steps are also explored.
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Affiliation(s)
- Yuesu Chen
- Center for Integrated Technology and Organic Synthesis (CiTOS)MolSys Research Unit, University of LiègeB6a, Room 3/19, Allée du Six Août 134000LiègeSart TilmanBelgium
| | - Sébastien Renson
- Center for Integrated Technology and Organic Synthesis (CiTOS)MolSys Research Unit, University of LiègeB6a, Room 3/19, Allée du Six Août 134000LiègeSart TilmanBelgium
| | - Jean‐Christophe M. Monbaliu
- Center for Integrated Technology and Organic Synthesis (CiTOS)MolSys Research Unit, University of LiègeB6a, Room 3/19, Allée du Six Août 134000LiègeSart TilmanBelgium
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2
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Chen Y, Renson S, Monbaliu JCM. On Demand Flow Platform for the Generation of Anhydrous Dinitrogen Trioxide and Its Further Use in N‐Nitrosative Reactions. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202210146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yuesu Chen
- University of Liege: Universite de Liege Center for Integrated Technology and Organic Synthesis BELGIUM
| | - Sébastien Renson
- University of Liege: Universite de Liege Center for Integrated Technology and Organic Synthesis BELGIUM
| | - Jean-Christophe M. Monbaliu
- University of Liège Chemistry Center for Integrated Technology and Organic SynthesisAllée du six Aout 13, Sart-Tilman 4000 Liège BELGIUM
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3
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Muramatsu W, Yamamoto H. An economical approach for peptide synthesis via regioselective C-N bond cleavage of lactams. Chem Sci 2022; 13:6309-6315. [PMID: 35733900 PMCID: PMC9159104 DOI: 10.1039/d2sc01466a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/21/2022] [Indexed: 11/21/2022] Open
Abstract
An economical, solvent-free, and metal-free method for peptide synthesis via C-N bond cleavage using lactams has been developed. The method not only eliminates the need for condensation agents and their auxiliaries, which are essential for conventional peptide synthesis, but also exhibits high atom economy. The reaction is versatile because it can tolerate side chains bearing a range of functional groups, affording up to >99% yields of the corresponding peptides without racemisation or polymerisation. Moreover, the developed strategy enables peptide segment coupling, providing access to a hexapeptide that occurs as a repeat sequence in spider silk proteins.
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Affiliation(s)
- Wataru Muramatsu
- Peptide Research Center, Chubu University 1200 Matsumoto-cho Kasugai Aichi 487-8501 Japan
| | - Hisashi Yamamoto
- Peptide Research Center, Chubu University 1200 Matsumoto-cho Kasugai Aichi 487-8501 Japan
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New Chlorinated 2,5-Diketopiperazines from Marine-Derived Bacteria Isolated from Sediments of the Eastern Mediterranean Sea. Molecules 2020; 25:molecules25071509. [PMID: 32225050 PMCID: PMC7181205 DOI: 10.3390/molecules25071509] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 03/21/2020] [Accepted: 03/23/2020] [Indexed: 11/17/2022] Open
Abstract
From the organic extracts of five bacterial strains isolated from marine sediments collected in the East Mediterranean Sea, three new (15, 16, 31) and twenty-nine previously reported (1–14, 17–30, 32) metabolites bearing the 2,5-diketopiperazine skeleton were isolated. The structures of the chlorinated compounds 15, 16, and 31 were elucidated by extensive analysis of their spectroscopic data (NMR, MS, UV, IR). Compounds 15 and 16 were evaluated for their antifungal activity against Candida albicans and Aspergillus niger but were proven inactive. The relevant literature is supplemented with complete NMR assignments and revisions for the 29 previously reported compounds.
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5
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Carro C, Romero I, Boto A. Microwave versus Conventional Light Activation of O-Radical Scission Processes. European J Org Chem 2017. [DOI: 10.1002/ejoc.201601034] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Carmen Carro
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3 38206 La Laguna Tenerife Spain
| | - Iván Romero
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3 38206 La Laguna Tenerife Spain
| | - Alicia Boto
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3 38206 La Laguna Tenerife Spain
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Bérubé C, Barbeau X, Cardinal S, Boudreault PL, Bouchard C, Delcey N, Lagüe P, Voyer N. Interfacial supramolecular biomimetic epoxidation catalysed by cyclic dipeptides. Supramol Chem 2016. [DOI: 10.1080/10610278.2016.1236197] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
| | - Xavier Barbeau
- Département de Biochimie, Microbiologie et Bioinformatique and PROTÉO, Université Laval, Québec, Canada
| | | | | | - Corinne Bouchard
- Département de Chimie and PROTEO, Université Laval, Québec, Canada
| | - Nicolas Delcey
- Département de Chimie and PROTEO, Université Laval, Québec, Canada
| | - Patrick Lagüe
- Département de Biochimie, Microbiologie et Bioinformatique and PROTÉO, Université Laval, Québec, Canada
| | - Normand Voyer
- Département de Chimie and PROTEO, Université Laval, Québec, Canada
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Wauters I, Goossens H, Delbeke E, Muylaert K, Roman BI, Van Hecke K, Van Speybroeck V, Stevens CV. Beyond the Diketopiperazine Family with Alternatively Bridged Brevianamide F Analogues. J Org Chem 2015; 80:8046-54. [PMID: 26193166 DOI: 10.1021/acs.joc.5b01161] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
A method for the preparation of 3,5-bridged piperazin-2-ones from a tryptophan-proline-based diketopiperazine is described using diphosgene to induce the ring closure. Density functional theory calculations were conducted to study the mechanism of this C-C bond formation. Several derivatives of the thus obtained α-chloroamine were synthesized by substitution of the chlorine atom using a range of O-, N-, S-, and C-nucleophiles. This novel class of brevianamide F analogues possess interesting breast cancer resistance protein inhibitory activity.
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Affiliation(s)
- I Wauters
- †Research Group SynBioC, Department of Sustainable Organic Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - H Goossens
- ‡Center for Molecular Modelling, Ghent University, Technologiepark 903, 9000 Ghent, Belgium
| | - E Delbeke
- †Research Group SynBioC, Department of Sustainable Organic Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - K Muylaert
- †Research Group SynBioC, Department of Sustainable Organic Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - B I Roman
- †Research Group SynBioC, Department of Sustainable Organic Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - K Van Hecke
- §XStruct, Department of Inorganic and Physical Chemistry, Ghent University, Krijgslaan 281, S3, 9000 Ghent, Belgium
| | - V Van Speybroeck
- ‡Center for Molecular Modelling, Ghent University, Technologiepark 903, 9000 Ghent, Belgium
| | - C V Stevens
- †Research Group SynBioC, Department of Sustainable Organic Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
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Nsengiyumva O, Hamedzadeh S, McDaniel J, Macho J, Simpson G, Panda SS, Ha K, Lebedyeva I, Faidallah HM, Al-Mohammadi MM, Hall CD, Katritzky AR. A benzotriazole-mediated route to protected marine-derived hetero-2,5-diketopiperazines containing proline. Org Biomol Chem 2015; 13:4399-403. [PMID: 25762208 DOI: 10.1039/c5ob00023h] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A procedure for the cyclization of dipeptidoyl benzotriazolides containing proline derivatives promoted by triethylamine under MW activation is introduced. The reaction is general for a variety of dipeptidoyl benzotriazolides and represents a very practical and convenient method for the preparation of Pro- or Hyp-derived 2,5-diketopiperazines (2,5-DKPs) and bis-DKPs with a disulfide linker. This method can be used for the construction of 2,5-DKP compound libraries and for the synthesis of natural products with diketopiperazine cores.
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Affiliation(s)
- Olivier Nsengiyumva
- Center for Heterocyclic Compounds, Department of Chemistry, University of Florida, Gainesville, FL 32611-7200, USA.
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Panmand DS, Tiwari AD, Panda SS, Monbaliu JCM, Beagle LK, Asiri AM, Stevens CV, Steel PJ, Hall CD, Katritzky AR. New benzotriazole-based reagents for the phosphonylation of various N-, O-, and S-nucleophiles. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.07.057] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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11
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Ha K, Lebedyeva I, Li Z, Martin K, Williams B, Faby E, Nasajpour A, Pillai GG, Al-Youbi AO, Katritzky AR. Conformationally Assisted Lactamizations for the Synthesis of Symmetrical and Unsymmetrical Bis-2,5-diketopiperazines. J Org Chem 2013; 78:8510-23. [DOI: 10.1021/jo401235k] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Khanh Ha
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Iryna Lebedyeva
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Zhiliang Li
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Kristin Martin
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Byron Williams
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Eric Faby
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Amir Nasajpour
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
| | - Girinath G. Pillai
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
- Institute of Chemistry, University of Tartu, Tartu 50411, Estonia
| | - Abdulrahman O. Al-Youbi
- Chemistry Department, Faculty
of Science, King Abdulaziz University,
Jeddah, 21589 Saudi Arabia
| | - Alan R. Katritzky
- Center for Heterocyclic
Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
- Chemistry Department, Faculty
of Science, King Abdulaziz University,
Jeddah, 21589 Saudi Arabia
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Monbaliu JCM, Dive G, Stevens CV, Katritzky AR. Governing Parameters of Long-Range Intramolecular S-to-N Acyl Transfers within (S)-Acyl Isopeptides. J Chem Theory Comput 2013; 9:927-34. [DOI: 10.1021/ct300830k] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Jean-Christophe M. Monbaliu
- Center for Heterocyclic Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
- Department of Sustainable Organic
Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium
| | - Georges Dive
- Center of Protein Engineering,
Institut de Chimie, University of Liège, Bâtiment B.6, B-4000 Sart Tilman, Liège, Belgium
| | - Christian V. Stevens
- Department of Sustainable Organic
Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, B-9000 Ghent, Belgium
| | - Alan R. Katritzky
- Center for Heterocyclic Compounds,
Department of Chemistry, University of Florida, Gainesville, Florida 32611-7200, United States
- Chemistry Department, King Abdulaziz University, Jeddah, 21589 Saudi Arabia
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13
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Monbaliu JCM, Katritzky AR. Recent trends in Cys- and Ser/Thr-based synthetic strategies for the elaboration of peptide constructs. Chem Commun (Camb) 2012; 48:11601-22. [DOI: 10.1039/c2cc34434c] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Ha K, Monbaliu JCM, Williams BC, Pillai GG, Ocampo CE, Zeller M, Stevens CV, Katritzky AR. A convenient synthesis of difficult medium-sized cyclic peptides by Staudinger mediated ring-closure. Org Biomol Chem 2012; 10:8055-8. [DOI: 10.1039/c2ob25996f] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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15
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Monbaliu JCM, Beagle LK, Kovacs J, Zeller M, Stevens CV, Katritzky AR. En route towards α-benzotriazoyl nitroso derivatives. RSC Adv 2012. [DOI: 10.1039/c2ra21311g] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
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