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For: Nathoo FS, Kong L, Zhu H. A Review of Statistical Methods in Imaging Genetics. CAN J STAT 2019;47:108-131. [PMID: 31274952 PMCID: PMC6605768 DOI: 10.1002/cjs.11487] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Accepted: 10/08/2018] [Indexed: 12/24/2022]
Number Cited by Other Article(s)
1
Wu Q, Zhang Y, Huang X, Ma T, Hong LE, Kochunov P, Chen S. A multivariate to multivariate approach for voxel-wise genome-wide association analysis. Stat Med 2024;43:3862-3880. [PMID: 38922949 PMCID: PMC11986643 DOI: 10.1002/sim.10101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 03/02/2024] [Accepted: 04/24/2024] [Indexed: 06/28/2024]
2
Wajid B, Jamil M, Awan FG, Anwar F, Anwar A. aXonica: A support package for MRI based Neuroimaging. BIOTECHNOLOGY NOTES (AMSTERDAM, NETHERLANDS) 2024;5:120-136. [PMID: 39416698 PMCID: PMC11446389 DOI: 10.1016/j.biotno.2024.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Revised: 08/04/2024] [Accepted: 08/08/2024] [Indexed: 10/19/2024]
3
Cheek CL, Lindner P, Grigorenko EL. Statistical and Machine Learning Analysis in Brain-Imaging Genetics: A Review of Methods. Behav Genet 2024;54:233-251. [PMID: 38336922 DOI: 10.1007/s10519-024-10177-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 01/24/2024] [Indexed: 02/12/2024]
4
Liu Y, Chakraborty N, Qin ZS, Kundu S, The Alzheimer’s Disease Neuroimaging Initiative. Integrative Bayesian tensor regression for imaging genetics applications. Front Neurosci 2023;17:1212218. [PMID: 37680967 PMCID: PMC10481528 DOI: 10.3389/fnins.2023.1212218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Accepted: 07/17/2023] [Indexed: 09/09/2023]  Open
5
Zhu H, Li T, Zhao B. Statistical Learning Methods for Neuroimaging Data Analysis with Applications. Annu Rev Biomed Data Sci 2023;6:73-104. [PMID: 37127052 PMCID: PMC11962820 DOI: 10.1146/annurev-biodatasci-020722-100353] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
6
Beaulac C, Wu S, Gibson E, Miranda MF, Cao J, Rocha L, Beg MF, Nathoo FS. Neuroimaging feature extraction using a neural network classifier for imaging genetics. BMC Bioinformatics 2023;24:271. [PMID: 37391692 DOI: 10.1186/s12859-023-05394-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 06/21/2023] [Indexed: 07/02/2023]  Open
7
Moon SW, Zhao L, Matloff W, Hobel S, Berger R, Kwon D, Kim J, Toga AW, Dinov ID, for the Alzheimer's Disease Neuroimaging Initiative. Brain structure and allelic associations in Alzheimer's disease. CNS Neurosci Ther 2023;29:1034-1048. [PMID: 36575854 PMCID: PMC10018103 DOI: 10.1111/cns.14073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 12/06/2022] [Accepted: 12/11/2022] [Indexed: 12/29/2022]  Open
8
Zhao Y, Chang C, Zhang J, Zhang Z. Genetic underpinnings of brain structural connectome for young adults. J Am Stat Assoc 2023;118:1473-1487. [PMID: 37982009 PMCID: PMC10655950 DOI: 10.1080/01621459.2022.2156349] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 11/29/2022] [Indexed: 12/13/2022]
9
Huang W, Tan K, Zhang Z, Hu J, Dong S. A Review of Fusion Methods for Omics and Imaging Data. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2023;20:74-93. [PMID: 35044920 DOI: 10.1109/tcbb.2022.3143900] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
10
Chen H, Caffo B, Stein-O’Brien G, Liu J, Langmead B, Colantuoni C, Xiao L. Two-stage linked component analysis for joint decomposition of multiple biologically related data sets. Biostatistics 2022;23:1200-1217. [PMID: 35358296 PMCID: PMC9566367 DOI: 10.1093/biostatistics/kxac005] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Revised: 01/13/2022] [Accepted: 01/24/2022] [Indexed: 02/03/2023]  Open
11
Image Genetic Analysis and Application Research Based on QRFPR and Other Neural Network-Related SNP Loci. BIOMED RESEARCH INTERNATIONAL 2022;2022:5861928. [PMID: 36017394 PMCID: PMC9398771 DOI: 10.1155/2022/5861928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Revised: 07/13/2022] [Accepted: 07/20/2022] [Indexed: 11/18/2022]
12
Zhao Y, Li L, Alzheimer's Disease Neuroimaging Initiative. Multimodal data integration via mediation analysis with high-dimensional exposures and mediators. Hum Brain Mapp 2022;43:2519-2533. [PMID: 35129252 PMCID: PMC9057105 DOI: 10.1002/hbm.25800] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 01/06/2022] [Accepted: 01/23/2022] [Indexed: 12/28/2022]  Open
13
Schalkamp AK, Rahman N, Monzón-Sandoval J, Sandor C. Deep phenotyping for precision medicine in Parkinson's disease. Dis Model Mech 2022;15:dmm049376. [PMID: 35647913 PMCID: PMC9178512 DOI: 10.1242/dmm.049376] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
14
Multi-omics approach in tea polyphenol research regarding tea plant growth, development and tea processing: current technologies and perspectives. FOOD SCIENCE AND HUMAN WELLNESS 2022. [DOI: 10.1016/j.fshw.2021.12.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
15
Chen T, Mandal A, Zhu H, Liu R. Imaging Genetic Based Mediation Analysis for Human Cognition. Front Neurosci 2022;16:824069. [PMID: 35573299 PMCID: PMC9097855 DOI: 10.3389/fnins.2022.824069] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2021] [Accepted: 03/23/2022] [Indexed: 11/30/2022]  Open
16
Gauran II, Xue G, Chen C, Ombao H, Yu Z. Ridge Penalization in High-Dimensional Testing With Applications to Imaging Genetics. Front Neurosci 2022;16:836100. [PMID: 35401090 PMCID: PMC8987922 DOI: 10.3389/fnins.2022.836100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 02/24/2022] [Indexed: 11/13/2022]  Open
17
Dai X, Li L. Orthogonalized Kernel Debiased Machine Learning for Multimodal Data Analysis. J Am Stat Assoc 2022;118:1796-1810. [PMID: 37771509 PMCID: PMC10530774 DOI: 10.1080/01621459.2021.2013851] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Accepted: 11/23/2021] [Indexed: 10/19/2022]
18
Vilor-Tejedor N, Garrido-Martín D, Rodriguez-Fernandez B, Lamballais S, Guigó R, Gispert JD. Multivariate Analysis and Modelling of multiple Brain endOphenotypes: Let's MAMBO! Comput Struct Biotechnol J 2021;19:5800-5810. [PMID: 34765095 PMCID: PMC8567328 DOI: 10.1016/j.csbj.2021.10.019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Revised: 10/08/2021] [Accepted: 10/12/2021] [Indexed: 12/01/2022]  Open
19
Zhang A, Fang J, Hu W, Calhoun VD, Wang YP. A Latent Gaussian Copula Model for Mixed Data Analysis in Brain Imaging Genetics. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2021;18:1350-1360. [PMID: 31689199 PMCID: PMC7756188 DOI: 10.1109/tcbb.2019.2950904] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
20
A generative-discriminative framework that integrates imaging, genetic, and diagnosis into coupled low dimensional space. Neuroimage 2021;238:118200. [PMID: 34118398 DOI: 10.1016/j.neuroimage.2021.118200] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 04/08/2021] [Accepted: 05/22/2021] [Indexed: 11/21/2022]  Open
21
Song Y, Ge S, Cao J, Wang L, Nathoo FS. A Bayesian spatial model for imaging genetics. Biometrics 2021;78:742-753. [PMID: 33765325 DOI: 10.1111/biom.13460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 02/08/2021] [Accepted: 02/24/2021] [Indexed: 11/29/2022]
22
Zhou J, Hu L, Jiang Y, Liu L. A Correlation Analysis between SNPs and ROIs of Alzheimer's Disease Based on Deep Learning. BIOMED RESEARCH INTERNATIONAL 2021;2021:8890513. [PMID: 33628827 PMCID: PMC7886593 DOI: 10.1155/2021/8890513] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2020] [Revised: 12/23/2020] [Accepted: 01/27/2021] [Indexed: 12/31/2022]
23
Nie Y, Opoku E, Yasmin L, Song Y, Wang J, Wu S, Scarapicchia V, Gawryluk J, Wang L, Cao J, Nathoo FS. Spectral dynamic causal modelling of resting-state fMRI: an exploratory study relating effective brain connectivity in the default mode network to genetics. Stat Appl Genet Mol Biol 2020;19:/j/sagmb.ahead-of-print/sagmb-2019-0058/sagmb-2019-0058.xml. [PMID: 32866136 DOI: 10.1515/sagmb-2019-0058] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2019] [Accepted: 07/27/2020] [Indexed: 11/15/2022]
24
Capitoli G, Piga I, Galimberti S, Leni D, Pincelli AI, Garancini M, Clerici F, Mahajneh A, Brambilla V, Smith A, Magni F, Pagni F. MALDI-MSI as a Complementary Diagnostic Tool in Cytopathology: A Pilot Study for the Characterization of Thyroid Nodules. Cancers (Basel) 2019;11:cancers11091377. [PMID: 31527543 PMCID: PMC6769566 DOI: 10.3390/cancers11091377] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Revised: 09/12/2019] [Accepted: 09/13/2019] [Indexed: 12/12/2022]  Open
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