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Marsot M, Bernard C, Payne A, Rossi S, Ruette S, Desvaux S, Richomme C, Bouchez-Zacria M, Durand B. "BACACIX", a spatial index combining proxies of bovine and badger space use associated with extended Mycobacterium bovis circulation in France. Prev Vet Med 2023; 211:105817. [PMID: 36543069 DOI: 10.1016/j.prevetmed.2022.105817] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 10/17/2022] [Accepted: 12/11/2022] [Indexed: 12/15/2022]
Abstract
To better prevent and control multi-host pathogen circulation over large areas, it is essential to identify patterns of disease persistence within host communities involved in pathogen circulation at a macroscale. The aim of this study was to design and calculate "BACACIX", a spatial index of indirect contacts between cattle and badgers, two species involved in the circulation of Mycobacterium bovis, one of the main causative agents of bovine tuberculosis (bTB), in some areas of France. The index combined spatial models of land use distribution (the probable distribution defining animal use of space) based on pasture location for cattle, and based on land cover for badgers, with proxies for animal density for both species. For badgers, we used two series of census data of badger setts in two regions of France to evaluate our model of badger space use distribution (also known as utilization distribution), and analyzed the relationship between BACACIX and the upsurge of bovine tuberculosis observed in several regions of France during the decade after the country obtained the officially bTB-free status in 2001. We observed high values of BACACIX from the southwest to the northeast of France and from Brittany to the Channel coast. Conversely, in two areas (north-central area and Mediterranean coast), index values were low, suggesting that indirect cattle-badger contacts were unlikely. In the two series of census data of badger setts that we analyzed, 96.5% and 87% of the global positioning system (GPS) locations of badger setts, respectively were located in the calculated badger space use distribution. A logistic regression model showed that after controlling bTB over the previous decade, the value of the index was positively associated with the risk of cattle outbreaks between 2001 and 2010 (OR = 1.57). In addition, the risk of bTB occurrence in cattle decreased when the pasture area outside the badger space use distribution increased. In the future, the spatial index of indirect cattle-badger contacts we propose could help to better target bTB surveillance and control in France.
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Affiliation(s)
- Maud Marsot
- French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Laboratory for Animal Health, Epidemiology Unit, University Paris-Est, Maisons-Alfort, France.
| | - Célia Bernard
- French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Laboratory for Animal Health, Epidemiology Unit, University Paris-Est, Maisons-Alfort, France
| | - Ariane Payne
- French Office for Biodiversity, Research and Scientific Support Division, Vincennes, France
| | - Sophie Rossi
- French Office for Biodiversity, Research and Scientific Support Division, Vincennes, France
| | - Sandrine Ruette
- French Office for Biodiversity, Research and Scientific Support Division, Vincennes, France
| | - Stéphanie Desvaux
- French Office for Biodiversity, Research and Scientific Support Division, Vincennes, France
| | - Céline Richomme
- Nancy Laboratory for Rabies and Wildlife, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Malzéville, France
| | - Malika Bouchez-Zacria
- French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Laboratory for Animal Health, Epidemiology Unit, University Paris-Est, Maisons-Alfort, France; Independent researcher, Audincthun, France
| | - Benoit Durand
- French Agency for Food, Environmental and Occupational Health and Safety (ANSES), Laboratory for Animal Health, Epidemiology Unit, University Paris-Est, Maisons-Alfort, France
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Mori E, Carbone R, Viviano A, Calosi M, Fattorini N. Factors affecting spatiotemporal behaviour in the European brown hare
Lepus europaeus
: a meta‐analysis. Mamm Rev 2022. [DOI: 10.1111/mam.12290] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Emiliano Mori
- Consiglio Nazionale delle Ricerche Istituto di Ricerca sugli Ecosistemi Terrestri Via Madonna del Piano 10 Sesto Fiorentino (FI)50019Italia
| | - Roberto Carbone
- Università degli Studi di Parma Parco Area delle Scienze 11a Parma43124Italia
| | - Andrea Viviano
- Consiglio Nazionale delle Ricerche Istituto di Ricerca sugli Ecosistemi Terrestri Via Madonna del Piano 10 Sesto Fiorentino (FI)50019Italia
- Dipartimento di Scienze Agrarie Alimentari e Agro‐ambientali Produzioni Agroalimentari e Gestione degli Agroecosistemi Università degli Studi di Pisa Via del Borghetto 80 Pisa56124Italia
| | - Martina Calosi
- Dipartimento di Scienze della Vita Università degli Studi di Siena Via P.A. Mattioli 4 Siena53100Italia
| | - Niccolò Fattorini
- Dipartimento di Scienze della Vita Università degli Studi di Siena Via P.A. Mattioli 4 Siena53100Italia
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Weterings MJ, Meister N, Fey K, Jansen PA, van Langevelde F, Kuipers HJ. Context-dependent responses of naïve ungulates to wolf-sound playback in a human-dominated landscape. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2021.12.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
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Woodgate Z, Distiller G, O’Riain MJ. Hare today, gone tomorrow: the role of interspecific competition in shaping riverine rabbit occurrence. ENDANGER SPECIES RES 2021. [DOI: 10.3354/esr01106] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Effective conservation, particularly of threatened species, requires an understanding of both abiotic and biotic drivers of distribution. In the case of one of Africa’s most endangered mammals, the riverine rabbit Bunolagus monticularis, only environmental covariates of presence have been used to provide coarse predictions of their distribution. Two potential competitors, namely scrub hare Lepus saxatilis and cape hare L. capensis, have significant (>90%) range overlap with the riverine rabbit, yet little is known about how these species interact. We used multi-species occupancy models, which model co-occurrence as a function of environmental variables, to assess the spatial response of riverine rabbits to both species of hare in Sanbona Wildlife Reserve, South Africa. We also examined temporal overlap between riverine rabbits and hares. Camera trapping data were collected from 150 camera traps distributed in clusters of 5 cameras at 30 independent sites, covering 223.24 km2. Contrary to prior studies, we found that riverine rabbits were not restricted to riparian habitat, and that their occurrence was conditional on hare absence and was negatively affected by terrain ruggedness. Whilst hare occurrence was independent of terrain ruggedness, it was negatively affected by rabbit presence. Activity patterns revealed high temporal overlap between hares and rabbits (Δ = 0.828, CI = 0.745-0.940); however, neither species co-occurred at any given site. Our results suggest that conservation management has greatly underestimated the importance of competition with other lagomorphs in understanding riverine rabbit occurrence.
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Affiliation(s)
- Z Woodgate
- Institute for Communities and Wildlife in Africa, Department of Biological Sciences, University of Cape Town, Cape Town 7701, South Africa
| | - G Distiller
- Statistics in Ecology, Environment and Conservation, Department of Statistical Science, University of Cape Town, Cape Town 7701, South Africa
| | - MJ O’Riain
- Institute for Communities and Wildlife in Africa, Department of Biological Sciences, University of Cape Town, Cape Town 7701, South Africa
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Viviano A, Mori E, Fattorini N, Mazza G, Lazzeri L, Panichi A, Strianese L, Mohamed WF. Spatiotemporal Overlap between the European Brown Hare and Its Potential Predators and Competitors. Animals (Basel) 2021; 11:562. [PMID: 33669965 PMCID: PMC7924828 DOI: 10.3390/ani11020562] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Revised: 02/15/2021] [Accepted: 02/18/2021] [Indexed: 12/16/2022] Open
Abstract
Analysis of spatiotemporal partitioning is pivotal to shed light on interspecific coexistence. Most research effort has involved large-sized carnivores and their prey, whereas little attention has been devoted to lagomorphs. We assessed spatiotemporal overlap among the European brown hare Lepus europaeus and its potential competitors and predators through camera-trapping in an area in Central Italy. We estimated the interspecific patterns of the spatiotemporal activity rhythms of brown hares, its potential predators (the red fox Vulpes vulpes, the pine marten Martes martes, the domestic cat Felis catus, and the domestic dog Canis familiaris), and a competitor, the roe deer Capreolus capreolus. Brown hare activity was studied in natural conditions as well as in a fenced area that excluded terrestrial predators and competitors. Free-ranging hares developed a more nocturnal behavior to avoid diurnal predators (i.e., domestic carnivores and martens). Although high temporal overlap was observed between free-ranging brown hares and both red foxes (82%) and roe deer (81%), hares avoided fox by being more active on darkest nights, as well as avoided roe deer through spatial partitioning. We suggest that hares may adapt their spatiotemporal behavior to avoid potential predators and competitors.
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Affiliation(s)
- Andrea Viviano
- Dipartimento di Scienze Agrarie, Università degli Studi di Pisa, 56124 Pisa, Italy;
| | - Emiliano Mori
- Consiglio Nazionale delle Ricerche, Istituto di Ricerca sugli Ecosistemi Terrestri, Via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
| | - Niccolò Fattorini
- Dipartimento di Scienze Ambientali e Politiche–ESP, Università di Milano, 20133 Milano, Italy;
| | - Giuseppe Mazza
- CREA Research Centre for Plant Protection and Certification, Cascine del Riccio, 50125 Firenze, Italy;
| | - Lorenzo Lazzeri
- Dipartimento di Scienze della Vita, Università di Siena, 53100 Siena, Italy;
| | - Alessandra Panichi
- Dipartimento di Biologia, dell’Università di Firenze, 50019 Sesto Fiorentino, Italy;
| | - Luigi Strianese
- Associazione Nazionale Libera Caccia, 58100 Grosseto, Italy;
| | - Walid Fathy Mohamed
- Department of Biological and Geological Sciences, Faculty of Education, Ain Shams University, Roxy, Cairo 11566, Egypt;
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Wagnon CJ, Schooley RL, Cosentino BJ. Shrub encroachment creates a dynamic landscape of fear for desert lagomorphs via multiple pathways. Ecosphere 2020. [DOI: 10.1002/ecs2.3240] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Affiliation(s)
- Casey J. Wagnon
- Department of Natural Resources and Environmental Sciences University of Illinois 1102 South Goodwin Avenue Urbana Illinois61801USA
| | - Robert L. Schooley
- Department of Natural Resources and Environmental Sciences University of Illinois 1102 South Goodwin Avenue Urbana Illinois61801USA
| | - Bradley J. Cosentino
- Department of Biology Hobart and William Smith Colleges 300 Pulteney Street Geneva New York14456USA
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Smith JA, Suraci JP, Hunter JS, Gaynor KM, Keller CB, Palmer MS, Atkins JL, Castañeda I, Cherry MJ, Garvey PM, Huebner SE, Morin DJ, Teckentrup L, Weterings MJA, Beaudrot L. Zooming in on mechanistic predator-prey ecology: Integrating camera traps with experimental methods to reveal the drivers of ecological interactions. J Anim Ecol 2020; 89:1997-2012. [PMID: 32441766 DOI: 10.1111/1365-2656.13264] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Accepted: 03/10/2020] [Indexed: 11/27/2022]
Abstract
Camera trap technology has galvanized the study of predator-prey ecology in wild animal communities by expanding the scale and diversity of predator-prey interactions that can be analysed. While observational data from systematic camera arrays have informed inferences on the spatiotemporal outcomes of predator-prey interactions, the capacity for observational studies to identify mechanistic drivers of species interactions is limited. Experimental study designs that utilize camera traps uniquely allow for testing hypothesized mechanisms that drive predator and prey behaviour, incorporating environmental realism not possible in the laboratory while benefiting from the distinct capacity of camera traps to generate large datasets from multiple species with minimal observer interference. However, such pairings of camera traps with experimental methods remain underutilized. We review recent advances in the experimental application of camera traps to investigate fundamental mechanisms underlying predator-prey ecology and present a conceptual guide for designing experimental camera trap studies. Only 9% of camera trap studies on predator-prey ecology in our review use experimental methods, but the application of experimental approaches is increasing. To illustrate the utility of camera trap-based experiments using a case study, we propose a study design that integrates observational and experimental techniques to test a perennial question in predator-prey ecology: how prey balance foraging and safety, as formalized by the risk allocation hypothesis. We discuss applications of camera trap-based experiments to evaluate the diversity of anthropogenic influences on wildlife communities globally. Finally, we review challenges to conducting experimental camera trap studies. Experimental camera trap studies have already begun to play an important role in understanding the predator-prey ecology of free-living animals, and such methods will become increasingly critical to quantifying drivers of community interactions in a rapidly changing world. We recommend increased application of experimental methods in the study of predator and prey responses to humans, synanthropic and invasive species, and other anthropogenic disturbances.
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Affiliation(s)
- Justine A Smith
- Department of Wildlife, Fish, and Conservation Biology, University of California, Davis, CA, USA
| | - Justin P Suraci
- Environmental Studies Department, Center for Integrated Spatial Research, University of California, Santa Cruz, CA, USA
| | - Jennifer S Hunter
- Hastings Natural History Reservation, University of California, Berkeley, CA, USA
| | - Kaitlyn M Gaynor
- National Center for Ecological Analysis and Synthesis, Santa Barbara, CA, USA
| | - Carson B Keller
- Department of Biology, California State University, Northridge, CA, USA
| | - Meredith S Palmer
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
| | - Justine L Atkins
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
| | - Irene Castañeda
- Centre d'Ecologie et des Sciences de la Conservation (CESCO UMR 7204), Sorbonne Universités, MNHN, CNRS, UPMC, Paris, France.,Ecologie, Systématique et Evolution, UMR CNRS 8079, Université Paris-Sud, Orsay Cedex, France
| | - Michael J Cherry
- Caesar Kleberg Wildlife Research Institute, Texas A&M University - Kingsville, Kingsville, TX, USA
| | | | - Sarah E Huebner
- College of Biological Sciences, University of Minnesota, St. Paul, MN, USA
| | - Dana J Morin
- Department of Wildlife, Fisheries, & Aquaculture, Mississippi State University, Starkville, MS, USA
| | - Lisa Teckentrup
- BioMove Research Training Group, University of Potsdam, Potsdam, Germany
| | - Martijn J A Weterings
- Wildlife Ecology and Conservation Group, Wageningen University, Wageningen, The Netherlands.,Department of Wildlife Management, Van Hall Larenstein University of Applied Sciences, Leeuwarden, The Netherlands
| | - Lydia Beaudrot
- Department of BioSciences, Program in Ecology and Evolutionary Biology, Rice University, Houston, TX, USA
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