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Car C, Quevarec L, Gilles A, Réale D, Bonzom JM. Evolutionary approach for pollution study: The case of ionizing radiation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 349:123692. [PMID: 38462194 DOI: 10.1016/j.envpol.2024.123692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 02/28/2024] [Accepted: 02/29/2024] [Indexed: 03/12/2024]
Abstract
Estimating the consequences of environmental changes, specifically in a global change context, is essential for conservation issues. In the case of pollutants, the interest in using an evolutionary approach to investigate their consequences has been emphasized since the 2000s, but these studies remain rare compared to the characterization of direct effects on individual features. We focused on the study case of anthropogenic ionizing radiation because, despite its potential strong impact on evolution, the scarcity of evolutionary approaches to study the biological consequences of this stressor is particularly true. In this study, by investigating some particular features of the biological effects of this stressor, and by reviewing existing studies on evolution under ionizing radiation, we suggest that evolutionary approach may help provide an integrative view on the biological consequences of ionizing radiation. We focused on three topics: (i) the mutagenic properties of ionizing radiation and its disruption of evolutionary processes, (ii) exposures at different time scales, leading to an interaction between past and contemporary evolution, and (iii) the special features of contaminated areas called exclusion zones and how evolution could match field and laboratory observed effects. This approach can contribute to answering several key issues in radioecology: to explain species differences in the sensitivity to ionizing radiation, to improve our estimation of the impacts of ionizing radiation on populations, and to help identify the environmental features impacting organisms (e.g., interaction with other pollution, migration of populations, anthropogenic environmental changes). Evolutionary approach would benefit from being integrated to the ecological risk assessment process.
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Affiliation(s)
- Clément Car
- Laboratoire de Recherche sur Les Effets des Radionucléides sur L'écosystème (LECO), Institut de Radioprotection et de Sûreté Nucléaire (IRSN), Saint-Paul Lèz Durance, France
| | - Loïc Quevarec
- Laboratoire de Recherche sur Les Effets des Radionucléides sur L'écosystème (LECO), Institut de Radioprotection et de Sûreté Nucléaire (IRSN), Saint-Paul Lèz Durance, France.
| | - André Gilles
- UMR Risques, ECOsystèmes, Vulnérabilité, Environnement, Résilience (RECOVER), Aix-Marseille Université (AMU), Marseille, France
| | - Denis Réale
- Département des Sciences Biologiques, Université Du Québec à Montréal, (UQAM), Montréal, Canada
| | - Jean-Marc Bonzom
- Laboratoire de Recherche sur Les Effets des Radionucléides sur L'écosystème (LECO), Institut de Radioprotection et de Sûreté Nucléaire (IRSN), Saint-Paul Lèz Durance, France
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Hood ME, Nelson S, Cho J, Launi M, Antonovics J, Bruns EL. Quantitative disease resistance in wild Silene vulgaris to its endemic pathogen Microbotryum silenes-inflatae. Ecol Evol 2023; 13:e10797. [PMID: 38125956 PMCID: PMC10731388 DOI: 10.1002/ece3.10797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 11/15/2023] [Accepted: 11/17/2023] [Indexed: 12/23/2023] Open
Abstract
The evolution of disease resistances is an expected feature of plant-pathogen systems, but whether the genetics of this trait most often produces qualitative or quantitative phenotypic variation is a significant gap in our understanding of natural populations. These two forms of resistance variation are often associated with differences in number of underlying loci, the specificities of host-pathogen coevolution, as well as contrasting mechanisms of preventing or slowing the infection process. Anther-smut disease is a commonly studied model for disease of wild species, where infection has severe fitness impacts, and prior studies have suggested resistance variation in several host species. However, because the outcome of exposing the individual host to this pathogen is binary (healthy or diseased), resistance has been previously measured at the family level, as the proportion of siblings that become diseased. This leaves uncertain whether among-family variation reflects contrasting ratios of segregating discrete phenotypes or continuous trait variation among individuals. In the host Silene vulgaris, plants were replicated by vegetative propagation in order to quantify the infection rates of the individual genotype with the endemic anther-smut pathogen, Microbotryum silenes-inflatae. The variance among field-collected families for disease resistance was significant, while there was unimodal continuous variation in resistance among genotypes. Using crosses between genotypes within ranked resistance quartiles, the offspring infection rate was predicted by the parental resistance values. While the potential remains in this system for resistance genes having major effects, as there were suggestions of such qualitative resistance in a prior study, here the quantitative disease resistance to the endemic anther-smut pathogen is indicated for S. vulgaris. The variation in natural populations and strong heritability of the trait, combined with severe fitness consequences of anther-smut disease, suggests that resistance in these host populations is highly capable of responding to disease-induced selection.
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Affiliation(s)
| | - Sydney Nelson
- Department of BiologyAmherst CollegeAmherstMassachusettsUSA
| | - Jae‐Hoon Cho
- Department of BiologyAmherst CollegeAmherstMassachusettsUSA
| | - Michelle Launi
- Department of BiologyAmherst CollegeAmherstMassachusettsUSA
| | - Janis Antonovics
- Department of BiologyUniversity of VirginiaCharlottesvilleVirginiaUSA
| | - Emily L. Bruns
- Department of BiologyUniversity of Maryland at College ParkCollege ParkMarylandUSA
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Car C, Gilles A, Goujon E, Muller MLD, Camoin L, Frelon S, Burraco P, Granjeaud S, Baudelet E, Audebert S, Orizaola G, Armengaud J, Tenenhaus A, Garali I, Bonzom JM, Armant O. Population transcriptogenomics highlights impaired metabolism and small population sizes in tree frogs living in the Chernobyl Exclusion Zone. BMC Biol 2023; 21:164. [PMID: 37525144 PMCID: PMC10391870 DOI: 10.1186/s12915-023-01659-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Accepted: 07/03/2023] [Indexed: 08/02/2023] Open
Abstract
BACKGROUND Individual functional modifications shape the ability of wildlife populations to cope with anthropogenic environmental changes. But instead of adaptive response, human-altered environments can generate a succession of deleterious functional changes leading to the extinction of the population. To study how persistent anthropogenic changes impacted local species' population status, we characterised population structure, genetic diversity and individual response of gene expression in the tree frog Hyla orientalis along a gradient of radioactive contamination around the Chernobyl nuclear power plant. RESULTS We detected lower effective population size in populations most exposed to ionizing radiation in the Chernobyl Exclusion Zone that is not compensated by migrations from surrounding areas. We also highlighted a decreased body condition of frogs living in the most contaminated area, a distinctive transcriptomics signature and stop-gained mutations in genes involved in energy metabolism. While the association with dose will remain correlational until further experiments, a body of evidence suggests the direct or indirect involvement of radiation exposure in these changes. CONCLUSIONS Despite ongoing migration and lower total dose rates absorbed than at the time of the accident, our results demonstrate that Hyla orientalis specimens living in the Chernobyl Exclusion Zone are still undergoing deleterious changes, emphasizing the long-term impacts of the nuclear disaster.
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Affiliation(s)
- Clément Car
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France
| | - André Gilles
- UMR 1467 RECOVER, Aix-Marseille Université, INRAE, Centre Saint-Charles, Marseille, France.
| | - Elen Goujon
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France
- Laboratoire Des Signaux Et Systèmes, Université Paris-Saclay, CNRS, CentraleSupélec, 91190, Gif-Sur-Yvette, France
| | - Marie-Laure Delignette Muller
- Laboratoire de Biométrie Et Biologie Evolutive, UMR 5558, Université de Lyon, Université Lyon 1, CNRS, VetAgro Sup, Villeurbanne, France
| | - Luc Camoin
- Aix-Marseille University, Inserm, CNRS, Institut Paoli-Calmettes, CRCM, Marseille Proteomics, Marseille, France
| | - Sandrine Frelon
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France
| | - Pablo Burraco
- Animal Ecology, Department of Ecology and Genetics, Evolutionary Centre, Uppsala University, 75236, Uppsala, Sweden
- Doñana Biological Station (CSIC), Seville, Spain
| | - Samuel Granjeaud
- Aix-Marseille University, Inserm, CNRS, Institut Paoli-Calmettes, CRCM, Marseille Proteomics, Marseille, France
| | - Emilie Baudelet
- Aix-Marseille University, Inserm, CNRS, Institut Paoli-Calmettes, CRCM, Marseille Proteomics, Marseille, France
| | - Stéphane Audebert
- Aix-Marseille University, Inserm, CNRS, Institut Paoli-Calmettes, CRCM, Marseille Proteomics, Marseille, France
| | - Germán Orizaola
- Animal Ecology, Department of Ecology and Genetics, Evolutionary Centre, Uppsala University, 75236, Uppsala, Sweden
- IMIB-Biodiversity Research Institute, University of Oviedo, 33600, Mieres-Asturias, Spain
- Zoology Unit, Department of Biology of Organisms and Systems, University of Oviedo, 33071, Oviedo-Asturias, Spain
| | - Jean Armengaud
- Département Médicaments Et Technologies Pour La Santé (DMTS), Université Paris-Saclay, CEA, INRAE, SPI, Bagnols-Sur-Cèze, France
| | - Arthur Tenenhaus
- Laboratoire Des Signaux Et Systèmes, Université Paris-Saclay, CNRS, CentraleSupélec, 91190, Gif-Sur-Yvette, France
| | - Imène Garali
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France
| | - Jean-Marc Bonzom
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France
| | - Olivier Armant
- Institut de Radioprotection Et de Sûreté Nucléaire (IRSN), PSE-ENV/SRTE/LECO, Cadarache, France.
- PSE-SANTE/SESANE/LRTox, Fontenay Aux Roses, France.
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Car C, Gilles A, Armant O, Burraco P, Beaugelin‐Seiller K, Gashchak S, Camilleri V, Cavalié I, Laloi P, Adam‐Guillermin C, Orizaola G, Bonzom J. Unusual evolution of tree frog populations in the Chernobyl exclusion zone. Evol Appl 2022; 15:203-219. [PMID: 35233243 PMCID: PMC8867709 DOI: 10.1111/eva.13282] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 06/25/2021] [Accepted: 06/29/2021] [Indexed: 12/03/2022] Open
Abstract
Despite the ubiquity of pollutants in the environment, their long-term ecological consequences are not always clear and still poorly studied. This is the case concerning the radioactive contamination of the environment following the major nuclear accident at the Chernobyl nuclear power plant. Notwithstanding the implications of evolutionary processes on the population status, few studies concern the evolution of organisms chronically exposed to ionizing radiation in the Chernobyl exclusion zone. Here, we examined genetic markers for 19 populations of Eastern tree frog (Hyla orientalis) sampled in the Chernobyl region about thirty years after the nuclear power plant accident to investigate microevolutionary processes ongoing in local populations. Genetic diversity estimated from nuclear and mitochondrial markers showed an absence of genetic erosion and higher mitochondrial diversity in tree frogs from the Chernobyl exclusion zone compared to other European populations. Moreover, the study of haplotype network permitted us to decipher the presence of an independent recent evolutionary history of Chernobyl exclusion zone's Eastern tree frogs caused by an elevated mutation rate compared to other European populations. By fitting to our data a model of haplotype network evolution, we suspected that Eastern tree frog populations in the Chernobyl exclusion zone have a high mitochondrial mutation rate and small effective population sizes. These data suggest that Eastern tree frog populations might offset the impact of deleterious mutations because of their large clutch size, but also question the long-term impact of ionizing radiation on the status of other species living in the Chernobyl exclusion zone.
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Affiliation(s)
- Clément Car
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
| | - André Gilles
- UMR RECOVERINRAEAix‐Marseille Université, Centre Saint‐CharlesMarseilleFrance
| | - Olivier Armant
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
| | - Pablo Burraco
- Animal EcologyDepartment of Ecology and GeneticsEvolutionary Biology CentreUppsala UniversityUppsalaSweden
- Institute of Biodiversity, Animal Health and Comparative MedicineCollege of Medical, Veterinary and Life SciencesUniversity of GlasgowGlasgowUK
| | | | - Sergey Gashchak
- Chornobyl Center for Nuclear SafetyRadioactive Waste and RadioecologySlavutychUkraine
| | - Virginie Camilleri
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
| | - Isabelle Cavalié
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
| | - Patrick Laloi
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
| | | | - Germán Orizaola
- IMIB‐Biodiversity Research Institute (Univ. Oviedo‐CSIC‐Princip. Asturias)Universidad de OviedoMieres‐AsturiasSpain
- Department Biology Organisms and SystemsZoology UnitUniversity of OviedoOviedo‐AsturiasSpain
| | - Jean‐Marc Bonzom
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN)PSE‐ENV/SRTE/LECOCadaracheFrance
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