Multisource noninvasive genetics of brown bears (Ursus arctos) in Greece reveals a highly structured population and a new matrilineal contact zone in southern Europe

Range-wide whole-genome resequencing of the brown bear reveals drivers of intraspecies divergence

Population-genomic studies can shed new light on the effect of past demographic processes on contemporary population structure. We reassessed phylogeographical patterns of a classic model species of postglacial recolonisation, the brown bear (Ursus arctos), using a range-wide resequencing dataset of 128 nuclear genomes. In sharp contrast to the erratic geographical distribution of mtDNA and Y-chromosomal haplotypes, autosomal and X-chromosomal multi-locus datasets indicate that brown bear population structure is largely explained by recent population connectivity. Multispecies coalescent based analyses reveal cases where mtDNA haplotype sharing between distant populations, such as between Iberian and southern Scandinavian bears, likely results from incomplete lineage sorting, not from ancestral population structure (i.e., postglacial recolonisation). However, we also argue, using forward-in-time simulations, that gene flow and recombination can rapidly erase genomic evidence of former population structure (such as an ancestral population in Beringia), while this signal is retained by Y-chromosomal and mtDNA, albeit likely distorted. We further suggest that if gene flow is male-mediated, the information loss proceeds faster in autosomes than in X chromosomes. Our findings emphasise that contemporary autosomal genetic structure may reflect recent population dynamics rather than postglacial recolonisation routes, which could contribute to mtDNA and Y-chromosomal discordances.

Genetic Analysis and Status of Brown Bear Sub-Populations in Three National Parks of Greece Functioning as Strongholds for the Species’ Conservation

In order to optimize the appropriate conservation actions for the brown bear (Ursus arctos L.) population in Greece, we estimated the census (Nc) and effective (Ne) population size as well as the genetic status of brown bear sub-populations in three National Parks (NP): Prespa (MBPNP), Pindos (PINDNP), and Rhodopi (RMNP). The Prespa and Pindos sub-populations are located in western Greece and the Rhodopi population is located in eastern Greece. We extracted DNA from 472 hair samples and amplified through PCR 10 microsatellite loci. In total, 257 of 472 samples (54.5%) were genotyped for 6–10 microsatellite loci. Genetic analysis revealed that the Ne was 35, 118, and 61 individuals in MBPNP, PINDNP, and RMNP, respectively, while high levels of inbreeding were found in Prespa and Rhodopi but not in Pindos. Moreover, analysis of genetic structure showed that the Pindos population is genetically distinct, whereas Prespa and Rhodopi show mutual overlaps. Finally, we found a notable gene flow from Prespa to Rhodopi (10.19%) and from Rhodopi to Prespa (14.96%). Therefore, targeted actions for the conservation of the bears that live in the abovementioned areas must be undertaken, in order to ensure the species’ viability and to preserve the corridors that allow connectivity between the bear sub-populations in Greece.

Exploring 15 years of brown bear (Ursus arctos)-vehicle collisions in northwestern Greece

Road networks provide several benefits to human societies; however, they are also one of the major drivers of fragmentation and habitat degradation. Their negative effects include wildlife-vehicle collisions which are associated with increased barrier effects, restricted gene flow, and increased local extinction risk. Large carnivores, such as the brown bear (Ursus arctos), are vulnerable to road mortality while they also put human safety at risk in every collision. We recorded approximately 100 bear-vehicle collisions during the last 15 years (2005–2020) in northwestern Greece and identified common aspects for collisions, i.e., spatial, or temporal segregation of collision events, road features, and age or sex of the involved animals. We recorded collisions in both the core distribution area of brown bears, as well as at the periphery, where few individuals, mostly males, disperse. According to our findings, there are four collision hotspots which include ca. 60% of total collisions. Bear-vehicle collisions occurred mostly in periods of increased animal mobility, under poor light conditions and low visibility. In most cases, we deem that a collision was unavoidable at the time of animal detection, because the driver could not have reacted in time to avoid it. Appropriate fencing, in combination with the retention of safe passages for the animals, can minimize collisions. Therefore, such mitigation measures, wildlife warning signs and other collision prevention systems, such as animal detection systems, should be adopted to decrease the number of bear-vehicle collisions and improve road safety.