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Tang S, Wan M, Zhang Y, Li J, Tao L, Li W. Method for Selecting the Down-Sampling Factor of Photoacoustic Image by Using Cumulative Power Difference in Frequency Domain. JOURNAL OF BIOPHOTONICS 2025:e70013. [PMID: 40103335 DOI: 10.1002/jbio.70013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2025] [Revised: 03/04/2025] [Accepted: 03/10/2025] [Indexed: 03/20/2025]
Abstract
As a novel non-invasive imaging technology, a constraint of photoacoustic microscopy (PAM) is its imaging speed. Often, PAM utilizes sparse spatial sampling, which necessitates extensive prior experimentation to accurately select the down-sampling factors. To overcome this limitation, this study proposes a frequency-domain evaluation index, cumulative power difference (CPD), for rapid selection of the optimal down-sampling factor. We apply the proposed CPD to photoacoustic images of the ear and brain of the mouse. The result shows that as the down-sampling factor increases, there is a similar decreasing trend in the quality of the 20 images. CPD was significantly correlated with PCC/MSE/SSIM (p < 0.001). The findings suggest that CPD, with its ability to evaluate the quality of photoacoustic images and quickly quantify the quality loss of down-sampled images without prior inspection. This study contributes to expanding the application range of PAM and supporting its clinical prospects.
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Affiliation(s)
- Shihao Tang
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
| | - Min Wan
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
| | - Yameng Zhang
- Nanjing Institute of Technology, Nanjing, Jiangsu, China
| | - Jiani Li
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
| | - Ling Tao
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
| | - Weitao Li
- Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
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Demina PA, Grishin OV, Malakhov SN, Timaeva OI, Kulikova ES, Pylaev TE, Saveleva MS, Goryacheva IY. Effect of photoconversion conditions on the spectral and cytotoxic properties of photoconvertible fluorescent polymer markers. Phys Chem Chem Phys 2024; 26:13078-13086. [PMID: 38628110 DOI: 10.1039/d3cp04606k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
Fluorescence labeling of cells is a versatile tool used to study cell behavior, which is of significant importance in biomedical sciences. Fluorescent photoconvertible markers based on polymer microcapsules have been recently considered as efficient and perspective ones for long-term tracking of individual cells. However, the dependence of photoconversion conditions on the polymeric capsule structure is still not sufficiently clear. Here, we have studied the structural and spectral properties of fluorescent photoconvertible polymeric microcapsules doped with Rhodamine B and irradiated using a pulsed laser in various regimes, and shown the dependence between the photoconversion degree and laser irradiation intensity. The effect of microcapsule composition on the photoconversion process was studied by monitoring structural changes in the initial and photoconverted microcapsules using X-ray diffraction analysis with synchrotron radiation source, and Fourier transform infrared, Raman and fluorescence spectroscopy. We demonstrated good biocompatibility of free-administered initial and photoconverted microcapsules through long-term monitoring of the RAW 264.7 monocyte/macrophage cells with unchanged viability. These data open new perspectives for using the developed markers as safe and precise cell labels with switchable fluorescent properties.
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Affiliation(s)
| | | | - Sergey N Malakhov
- National Research Centre "Kurchatov Institute", Moscow, 123182, Russia
| | - Olesya I Timaeva
- National Research Centre "Kurchatov Institute", Moscow, 123182, Russia
| | | | - Timofey E Pylaev
- Saratov State University, Saratov 410012, Russia.
- Institute of Biochemistry and Physiology of Plants and Microorganisms - Subdivision of the Federal State Budgetary Research Institution Saratov Federal Scientific Centre of the Russian Academy of Sciences, Saratov, 410049, Russia
- Saratov Medical State University n.a. V.I. Razumovsky, Saratov, 410012, Russia
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Yu Y, Feng T, Qiu H, Gu Y, Chen Q, Zuo C, Ma H. Simultaneous photoacoustic and ultrasound imaging: A review. ULTRASONICS 2024; 139:107277. [PMID: 38460216 DOI: 10.1016/j.ultras.2024.107277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 01/09/2024] [Accepted: 02/26/2024] [Indexed: 03/11/2024]
Abstract
Photoacoustic imaging (PAI) is an emerging biomedical imaging technique that combines the advantages of optical and ultrasound imaging, enabling the generation of images with both optical resolution and acoustic penetration depth. By leveraging similar signal acquisition and processing methods, the integration of photoacoustic and ultrasound imaging has introduced a novel hybrid imaging modality suitable for clinical applications. Photoacoustic-ultrasound imaging allows for non-invasive, high-resolution, and deep-penetrating imaging, providing a wealth of image information. In recent years, with the deepening research and the expanding biomedical application scenarios of photoacoustic-ultrasound bimodal systems, the immense potential of photoacoustic-ultrasound bimodal imaging in basic research and clinical applications has been demonstrated, with some research achievements already commercialized. In this review, we introduce the principles, technical advantages, and biomedical applications of photoacoustic-ultrasound bimodal imaging techniques, specifically focusing on tomographic, microscopic, and endoscopic imaging modalities. Furthermore, we discuss the future directions of photoacoustic-ultrasound bimodal imaging technology.
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Affiliation(s)
- Yinshi Yu
- Smart Computational Imaging Laboratory (SCILab), School of Electronic and Optical Engineering, Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210094, China; Smart Computational Imaging Research Institute (SCIRI) of Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210019, China; Jiangsu Key Laboratory of Spectral Imaging & Intelligent Sense, Nanjing, Jiangsu Province 210094, China
| | - Ting Feng
- Academy for Engineering & Technology, Fudan University, Shanghai 200433,China.
| | - Haixia Qiu
- First Medical Center of PLA General Hospital, Beijing, China
| | - Ying Gu
- First Medical Center of PLA General Hospital, Beijing, China
| | - Qian Chen
- Smart Computational Imaging Laboratory (SCILab), School of Electronic and Optical Engineering, Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210094, China; Smart Computational Imaging Research Institute (SCIRI) of Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210019, China; Jiangsu Key Laboratory of Spectral Imaging & Intelligent Sense, Nanjing, Jiangsu Province 210094, China
| | - Chao Zuo
- Smart Computational Imaging Laboratory (SCILab), School of Electronic and Optical Engineering, Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210094, China; Smart Computational Imaging Research Institute (SCIRI) of Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210019, China; Jiangsu Key Laboratory of Spectral Imaging & Intelligent Sense, Nanjing, Jiangsu Province 210094, China.
| | - Haigang Ma
- Smart Computational Imaging Laboratory (SCILab), School of Electronic and Optical Engineering, Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210094, China; Smart Computational Imaging Research Institute (SCIRI) of Nanjing University of Science and Technology, Nanjing, Jiangsu Province 210019, China; Jiangsu Key Laboratory of Spectral Imaging & Intelligent Sense, Nanjing, Jiangsu Province 210094, China.
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Gadallah MT, Mohamed AEA, Hefnawy A, Zidan H, El-banby G, Badawy SM. A Mathematical Model for Simulating Photoacoustic Signal Generation Process in Biological Tissues.. [DOI: 10.21203/rs.3.rs-2928563/v2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Abstract
Background: Biomedical photoacoustic imaging (PAI) is a hybrid imaging modality based on the laser-generated ultrasound waves due to the photoacoustic (PA) effect physical phenomenon that has been reported firstly by A. G. Bell in 1880. Numerical modeling-based simulation for the PA signal generation process in biological tissues helps researchers for decreasing error trials in-vitro and hence decreasing error rates for in-vivo experiments. Numerical modeling methods help in obtaining a rapid modeling procedure comparable to pure mathematics. However, if a proper simplified mathematical model can be founded before applying numerical modeling techniques, it will be a great advantage for the overall numerical model. Most scientific theories, equations, and assumptions, been proposed to mathematically model the complete PA signal generation and propagation process in biological tissues, are so complicated. Hence, the researchers, especially the beginners, will find a hard difficulty to explore and obtain a proper simplified mathematical model describing the process. That’s why this paper is introduced.
Methods: In this paper we have tried to simplify understanding for the biomedical PA wave’s generation and propagation process, deducing a simplified mathematical model for the whole process. The proposed deduced model is based on three steps: a- pulsed laser irradiance, b- diffusion of light through biological tissue, and c- acoustic pressure wave generation and propagation from the target tissue to the ultrasound transducer surface. COMSOL Multiphysics, which is founded due to the finite element method (FEM) numerical modeling principle, has been utilized to validate the proposed deduced mathematical model on a simulated biological tissue including a tumor inside.
Results and Conclusion: The time-dependent study been applied by COMSOL has assured that the proposed deduced mathematical model may be considered as a simplified, easy, and fast startup base for scientific researchers to numerically model and simulate biomedical PA signals’ generation and propagation process utilizing any proper software like COMSOL.
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Gadallah MT, Mohamed AEA, Hefnawy A, Zidan H, El-banby G, Badawy SM. A Mathematical Model for Simulating Photoacoustic Signal Generation Process in Biological Tissues.. [DOI: 10.21203/rs.3.rs-2928563/v1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Abstract
Background
Biomedical photoacoustic imaging (PAI) is a hybrid imaging modality based on the laser-generated ultrasound waves due to the photoacoustic (PA) effect physical phenomenon that has been reported firstly by A. G. Bell in 1880. Numerical modeling based simulation for PA signal generation process in biological tissues helps researchers for decreasing error trials in-vitro and hence decreasing error rates for in-vivo experiments. Numerical modeling methods help in obtaining a rapid modeling procedure comparable to pure mathematics. However, if a proper simplified mathematical model can be founded before applying numerical modeling techniques, it will be a great advantage for the overall numerical model. More scientific theories, equations, and assumptions through the biomedical PA imaging research literature have been proposed trying to mathematically model the complete PA signal generation and propagation process in biological tissues. However, most of them have so complicated details. Hence, the researchers, especially the beginners, will find a hard difficulty to explore and obtain a proper simplified mathematical model describing the process. That’s why this paper is introduced.
Methods
In this paper we have tried to simplify understanding for the biomedical PA wave’s generation and propagation process, deducing a simplified mathematical model for the whole process. The proposed deduced model is based on three steps: a- pulsed laser irradiance, b- diffusion of light through biological tissue, and c- acoustic pressure wave generation and propagation from the target tissue to the ultrasound transducer surface.
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