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Xue A, Fan S. Matrices and Affinity Ligands for Antibody Purification and Corresponding Applications in Radiotherapy. Biomolecules 2022; 12:biom12060821. [PMID: 35740946 PMCID: PMC9221399 DOI: 10.3390/biom12060821] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 06/09/2022] [Accepted: 06/10/2022] [Indexed: 02/05/2023] Open
Abstract
Antibodies have become an important class of biological products in cancer treatments such as radiotherapy. The growing therapeutic applications have driven a demand for high-purity antibodies. Affinity chromatography with a high affinity and specificity has always been utilized to separate antibodies from complex mixtures. Quality chromatographic components (matrices and affinity ligands) have either been found or generated to increase the purity and yield of antibodies. More importantly, some matrices (mainly particles) and affinity ligands (including design protocols) for antibody purification can act as radiosensitizers or carriers for therapeutic radionuclides (or for radiosensitizers) either directly or indirectly to improve the therapeutic efficiency of radiotherapy. This paper provides a brief overview on the matrices and ligands used in affinity chromatography that are involved in antibody purification and emphasizes their applications in radiotherapy to enrich potential approaches for improving the efficacy of radiotherapy.
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2
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Chu W, Sripada SA, Reese HR, Bhandari D, Adams A, Sly J, Crapanzano M, Menegatti S. Purification of polyclonal immunoglobulin G from human serum using peptide‐based adsorbents. AIChE J 2021. [DOI: 10.1002/aic.17482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Wenning Chu
- Department of Chemical and Biomolecular Engineering North Carolina State University Raleigh North Carolina USA
| | - Sobhana A. Sripada
- Department of Chemical and Biomolecular Engineering North Carolina State University Raleigh North Carolina USA
| | - Hannah R. Reese
- Department of Chemical and Biomolecular Engineering North Carolina State University Raleigh North Carolina USA
| | | | - Augustus Adams
- Department of Chemical and Biomolecular Engineering North Carolina State University Raleigh North Carolina USA
| | - Jae Sly
- LigaTrap Technologies LLC Durham North Carolina USA
| | | | - Stefano Menegatti
- Department of Chemical and Biomolecular Engineering North Carolina State University Raleigh North Carolina USA
- LigaTrap Technologies LLC Durham North Carolina USA
- Biomanufacturing Training and Education Center (BTEC) North Carolina State University Raleigh North Carolina USA
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3
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Lavoie RA, Chu W, Lavoie JH, Hetzler Z, Williams TI, Carbonell R, Menegatti S. Removal of host cell proteins from cell culture fluids by weak partitioning chromatography using peptide-based adsorbents. Sep Purif Technol 2021. [DOI: 10.1016/j.seppur.2020.117890] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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4
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Chu W, Prodromou R, Day KN, Schneible JD, Bacon KB, Bowen JD, Kilgore RE, Catella CM, Moore BD, Mabe MD, Alashoor K, Xu Y, Xiao Y, Menegatti S. Peptides and pseudopeptide ligands: a powerful toolbox for the affinity purification of current and next-generation biotherapeutics. J Chromatogr A 2020; 1635:461632. [PMID: 33333349 DOI: 10.1016/j.chroma.2020.461632] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 10/14/2020] [Accepted: 10/15/2020] [Indexed: 02/08/2023]
Abstract
Following the consolidation of therapeutic proteins in the fight against cancer, autoimmune, and neurodegenerative diseases, recent advancements in biochemistry and biotechnology have introduced a host of next-generation biotherapeutics, such as CRISPR-Cas nucleases, stem and car-T cells, and viral vectors for gene therapy. With these drugs entering the clinical pipeline, a new challenge lies ahead: how to manufacture large quantities of high-purity biotherapeutics that meet the growing demand by clinics and biotech companies worldwide. The protein ligands employed by the industry are inadequate to confront this challenge: while featuring high binding affinity and selectivity, these ligands require laborious engineering and expensive manufacturing, are prone to biochemical degradation, and pose safety concerns related to their bacterial origin. Peptides and pseudopeptides make excellent candidates to form a new cohort of ligands for the purification of next-generation biotherapeutics. Peptide-based ligands feature excellent target biorecognition, low or no toxicity and immunogenicity, and can be manufactured affordably at large scale. This work presents a comprehensive and systematic review of the literature on peptide-based ligands and their use in the affinity purification of established and upcoming biological drugs. A comparative analysis is first presented on peptide engineering principles, the development of ligands targeting different biomolecular targets, and the promises and challenges connected to the industrial implementation of peptide ligands. The reviewed literature is organized in (i) conventional (α-)peptides targeting antibodies and other therapeutic proteins, gene therapy products, and therapeutic cells; (ii) cyclic peptides and pseudo-peptides for protein purification and capture of viral and bacterial pathogens; and (iii) the forefront of peptide mimetics, such as β-/γ-peptides, peptoids, foldamers, and stimuli-responsive peptides for advanced processing of biologics.
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Affiliation(s)
- Wenning Chu
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Raphael Prodromou
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Kevin N Day
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - John D Schneible
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Kaitlyn B Bacon
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - John D Bowen
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Ryan E Kilgore
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Carly M Catella
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Brandyn D Moore
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Matthew D Mabe
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606
| | - Kawthar Alashoor
- Department of Biochemistry and Biophysics, University of Rochester, Rochester, NY 14642
| | - Yiman Xu
- College of Material Science and Engineering, Donghua University, 201620 Shanghai, People's Republic of China
| | - Yuanxin Xiao
- College of Textile, Donghua University, Songjiang District, Shanghai, 201620, People's Republic of China
| | - Stefano Menegatti
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way room 2-009, Raleigh, NC 27606.
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5
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Novel peptide ligands for antibody purification provide superior clearance of host cell protein impurities. J Chromatogr A 2020; 1625:461237. [DOI: 10.1016/j.chroma.2020.461237] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Revised: 05/10/2020] [Accepted: 05/12/2020] [Indexed: 11/19/2022]
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6
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Barozzi A, Lavoie RA, Day KN, Prodromou R, Menegatti S. Affibody-Binding Ligands. Int J Mol Sci 2020; 21:ijms21113769. [PMID: 32471034 PMCID: PMC7312911 DOI: 10.3390/ijms21113769] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 05/21/2020] [Accepted: 05/24/2020] [Indexed: 02/03/2023] Open
Abstract
While antibodies remain established therapeutic and diagnostic tools, other protein scaffolds are emerging as effective and safer alternatives. Affibodies in particular are a new class of small proteins marketed as bio-analytic reagents. They feature tailorable binding affinity, low immunogenicity, high tissue permeation, and high expression titer in bacterial hosts. This work presents the development of affibody-binding peptides to be utilized as ligands for their purification from bacterial lysates. Affibody-binding candidates were identified by screening a peptide library simultaneously against two model affibodies (anti-immunoglobulin G (IgG) and anti-albumin) with the aim of selecting peptides targeting the conserved domain of affibodies. An ensemble of homologous sequences identified from screening was synthesized on Toyopearl® resin and evaluated via binding studies to select sequences that afford high product binding and recovery. The affibody-peptide interaction was also evaluated by in silico docking, which corroborated the targeting of the conserved domain. Ligand IGKQRI was validated through purification of an anti-ErbB2 affibody from an Escherichia coli lysate. The values of binding capacity (~5 mg affibody per mL of resin), affinity (KD ~1 μM), recovery and purity (64-71% and 86-91%), and resin lifetime (100 cycles) demonstrate that IGKQRI can be employed as ligand in affibody purification processes.
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Affiliation(s)
- Annalisa Barozzi
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA; (A.B.); (R.A.L.); (K.N.D.); (R.P.)
| | - R. Ashton Lavoie
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA; (A.B.); (R.A.L.); (K.N.D.); (R.P.)
| | - Kevin N. Day
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA; (A.B.); (R.A.L.); (K.N.D.); (R.P.)
| | - Raphael Prodromou
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA; (A.B.); (R.A.L.); (K.N.D.); (R.P.)
| | - Stefano Menegatti
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA; (A.B.); (R.A.L.); (K.N.D.); (R.P.)
- Biomanufacturing Training and Education Center (BTEC), North Carolina State University, Raleigh, NC 27695-7905, USA
- Correspondence: ; Tel.: +1-919-753-3276
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7
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Pourrostam-Ravadanaq P, Safa KD, Abbasi H. Study of imidazole performance as pseudo-affinity ligand in the purification of IgG from bovine milk. Anal Biochem 2020; 597:113693. [PMID: 32201137 DOI: 10.1016/j.ab.2020.113693] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 03/13/2020] [Accepted: 03/18/2020] [Indexed: 11/17/2022]
Abstract
The spherical sepharose CL-6B beads were activated by epichlorohydrin in different epoxy contents (80, 120 and 160 μmolepoxide/mLgel) and, l-histidine and imidazole as pseudo-affinity ligands were covalently immobilized to them. Some linkers with different length, (1,2-ethanediol diglycidyl ether and 1,4-butanediol diglycidyl ether) were synthesized for activation of sepharose and the activated sepharose beads modified with imidazole and the performance of these adsorbents in the purification of immunoglobulin G from bovine milk were evaluated. Among the l-histidine bearing adsorbents, higher adsorption of IgG (0.28 mg/mL) was obtained by adsorbent with the lower concentration of l-histidine. The highest amount of IgG adsorption (0.53 mg/mL) was obtained by imidazole bearing adsorbent with the highest amount of imidazole and Among the adsorbents with synthesized linkers, the adsorbent with 1,2-ethanediol diglycidyl ether showed better performance and was able to purify 0.25 mg/mL IgG with high purity. The synthesized pseudo-affinity adsorbents represented the abbility to purify immunoglobulin G in one-step process with high purity and efficiency.
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Affiliation(s)
| | - Kazem D Safa
- Department of Organic Chemistry and Biochemistry, Faculty of Chemistry, University of Tabriz, Tabriz, Iran.
| | - Hassan Abbasi
- Department of Organic Chemistry and Biochemistry, Faculty of Chemistry, University of Tabriz, Tabriz, Iran
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8
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Reese H, Bordelon T, Odeh F, Broussard A, Kormos C, Murphy A, Shanahan C, Menegatti S. Purification of animal immunoglobulin G (IgG) using peptoid affinity ligands. Biotechnol Prog 2020; 36:e2994. [DOI: 10.1002/btpr.2994] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 02/07/2020] [Accepted: 03/02/2020] [Indexed: 01/19/2023]
Affiliation(s)
- Hannah Reese
- Department of Chemical and Biomolecular EngineeringNorth Carolina State University Raleigh North Carolina USA
| | | | - Fuad Odeh
- LigaTrap LLC Raleigh North Carolina USA
| | | | | | | | - Calvin Shanahan
- Department of Chemical and Biomolecular EngineeringNorth Carolina State University Raleigh North Carolina USA
| | - Stefano Menegatti
- Department of Chemical and Biomolecular EngineeringNorth Carolina State University Raleigh North Carolina USA
- Biomanufacturing Training and Education Center (BTEC)North Carolina State University Raleigh North Carolina USA
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9
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Chromatographic assay to probe the binding energy and mechanisms of homologous proteins to surface-bound ligands. J Chromatogr B Analyt Technol Biomed Life Sci 2020; 1136:121927. [DOI: 10.1016/j.jchromb.2019.121927] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 10/08/2019] [Accepted: 12/03/2019] [Indexed: 01/01/2023]
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10
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Reese H, Bordelon T, Shanahan C, Crapanzano M, Sly J, Menegatti S. Novel peptoid-based adsorbents for purifying IgM and IgG from polyclonal and recombinant sources. J Chromatogr B Analyt Technol Biomed Life Sci 2020; 1137:121909. [DOI: 10.1016/j.jchromb.2019.121909] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Revised: 11/24/2019] [Accepted: 11/27/2019] [Indexed: 12/27/2022]
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11
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Bordelon T, Bobay B, Murphy A, Reese H, Shanahan C, Odeh F, Broussard A, Kormos C, Menegatti S. Translating antibody-binding peptides into peptoid ligands with improved affinity and stability. J Chromatogr A 2019; 1602:284-299. [DOI: 10.1016/j.chroma.2019.05.047] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Revised: 05/03/2019] [Accepted: 05/24/2019] [Indexed: 12/18/2022]
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12
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Razdan S, Wang JC, Barua S. PolyBall: A new adsorbent for the efficient removal of endotoxin from biopharmaceuticals. Sci Rep 2019; 9:8867. [PMID: 31222053 PMCID: PMC6586805 DOI: 10.1038/s41598-019-45402-w] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Accepted: 06/06/2019] [Indexed: 01/20/2023] Open
Abstract
The presence of endotoxin, also known as lipopolysaccharides (LPS), as a side product appears to be a major drawback for the production of certain biomolecules that are essential for research, pharmaceutical, and industrial applications. In the biotechnology industry, gram-negative bacteria (e.g., Escherichia coli) are widely used to produce recombinant products such as proteins, plasmid DNAs and vaccines. These products are contaminated with LPS, which may cause side effects when administered to animals or humans. Purification of LPS often suffers from product loss. For this reason, special attention must be paid when purifying proteins aiming a product as free as possible of LPS with high product recovery. Although there are a number of methods for removing LPS, the question about how LPS removal can be carried out in an efficient and economical way is still one of the most intriguing issues and has no satisfactory solution yet. In this work, polymeric poly-ε-caprolactone (PCL) nanoparticles (NPs) (dP = 780 ± 285 nm) were synthesized at a relatively low cost and demonstrated to possess sufficient binding sites for LPS adsorption and removal with ~100% protein recovery. The PCL NPs removed greater than 90% LPS from protein solutions suspended in water using only one milligram (mg) of NPs, which was equivalent to ~1.5 × 106 endotoxin units (EU) per mg of particle. The LPS removal efficacy increased to a higher level (~100%) when phosphate buffered saline (PBS containing 137 mM NaCl) was used as a protein suspending medium in place of water, reflecting positive effects of increasing ionic strength on LPS binding interactions and adsorption. The results further showed that the PCL NPs not only achieved 100% LPS removal but also ~100% protein recovery for a wide concentration range from 20-1000 μg/ml of protein solutions. The NPs were highly effective in different buffers and pHs. To scale up the process further, PCL NPs were incorporated into a supporting cellulose membrane which promoted LPS adsorption further up to ~100% just by running the LPS-containing water through the membrane under gravity. Its adsorption capacity was 2.8 × 106 mg of PCL NPs, approximately 2 -fold higher than that of NPs alone. This is the first demonstration of endotoxin separation with high protein recovery using polymer NPs and the NP-based portable filters, which provide strong adsorptive interactions for LPS removal from protein solutions. Additional features of these NPs and membranes are biocompatible (environment friendly) recyclable after repeated elution and adsorption with no significant changes in LPS removal efficiencies. The results indicate that PCL NPs are an effective LPS adsorbent in powder and membrane forms, which have great potential to be employed in large-scale applications.
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Affiliation(s)
- Sidharth Razdan
- Department of Chemical and Biochemical Engineering Missouri University of Science and Technology, Rolla, MO, 65409, USA
| | - Jee-Ching Wang
- Department of Chemical and Biochemical Engineering Missouri University of Science and Technology, Rolla, MO, 65409, USA
| | - Sutapa Barua
- Department of Chemical and Biochemical Engineering Missouri University of Science and Technology, Rolla, MO, 65409, USA.
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13
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Silica resins and peptide ligands to develop disposable affinity adsorbents for antibody purification. Biochem Eng J 2019. [DOI: 10.1016/j.bej.2018.07.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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14
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Islam N, Gurgel PV, Rojas OJ, Carbonell RG. Use of a Branched Linker for Enhanced Biosensing Properties in IgG Detection from Mixed Chinese Hamster Ovary Cell Cultures. Bioconjug Chem 2019; 30:815-825. [PMID: 30653289 DOI: 10.1021/acs.bioconjchem.8b00918] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Tris(2-aminoethyl)-amine (TREN), a branched amine, was coupled to planar surfaces of alkanethiol self-assembled monolayers (SAMs) to increase the grafting density of IgG-binding peptide (HWRGWV or HWRGWVG) on gold surfaces. One of the three primary amine pendant groups of TREN anchors onto the SAM, while the other two are available for grafting with the C-termini of the peptide. The ellipsometric peptide density on the SAM-branched amine was 1.24 molecules nm-2. The surfaces carrying the peptides were investigated via surface plasmon resonance (SPR) to quantify the adsorption of IgG and showed maximum binding capacity, Qm of 4.45 mg m-2, and dissociation constant, Kd of 8.7 × 10-7 M. Real-time dynamic adsorption data was used to determine adsorption rate constants, ka values, and the values were dependent on IgG concentration. IgG binding from complex mixtures of Chinese hamster ovary supernatant (CHO) was investigated and regeneration studies were carried out. Compared to the unbranched amine-based surfaces, the branched amines increased the overall sensitivity and selectivity for IgG adsorption from complex mixtures. Regeneration of the branched amine-based surfaces was achieved with 0.1 M NaOH, with less than 10% decline in peptide activity after 12 cycles of regeneration-binding.
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Affiliation(s)
- Nafisa Islam
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695-7905 , United States.,Department of Chemical Engineering , Bangladesh University of Engineering and Technology , Dhaka 1000 , Bangladesh
| | - Patrick V Gurgel
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695-7905 , United States.,Prometic Bioseparations , Cambridgeshire , CB23 7AJ , United Kingdom
| | - Orlando J Rojas
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695-7905 , United States.,Department of Bioproducts and Biosystems, School of Chemical Engineering , Aalto University , Espoo , 00076 , Finland
| | - Ruben G Carbonell
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695-7905 , United States.,Biomanufacturing Training and Education (BTEC) , North Carolina State University , Raleigh , North Carolina 27606 , United States
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15
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Islam T, Naik AD, Hashimoto Y, Menegatti S, Carbonell RG. Optimization of Sequence, Display, and Mode of Operation of IgG-Binding Peptide Ligands to Develop Robust, High-Capacity Affinity Adsorbents That Afford High IgG Product Quality. Int J Mol Sci 2019; 20:E161. [PMID: 30621158 PMCID: PMC6337475 DOI: 10.3390/ijms20010161] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2018] [Revised: 12/20/2018] [Accepted: 12/26/2018] [Indexed: 11/16/2022] Open
Abstract
This work presents the use of peptide ligand HWRGWV and its cognate sequences to develop affinity adsorbents that compete with Protein A in terms of binding capacity and quality of the eluted product. First, the peptide ligand was conjugated to crosslinked agarose resins (WorkBeads) at different densities and using different spacer arms. The optimization of ligand density and display resulted in values of static and dynamic binding capacity of 85 mg/mL and 65 mg/mL, respectively. A selected peptide-WorkBeads adsorbent was utilized for purifying Mabs from Chinese Hamster Ovary (CHO) cell culture supernatants. The peptide-WorkBeads adsorbent was found able to withstand sanitization with strong alkaline solutions (0.5 M NaOH). The purity of the eluted product was consistently higher than 95%, with logarithmic removal value (LRV) of 1.5 for host cell proteins (HCPs) and 4.0 for DNA. HCP clearance was significantly improved by adding a post-load washing step with either 0.1 M Tris HCl pH 9 or 1 M NaCl. The cognate peptide of HWRGWV, constructed by replacing arginine (R) with citrulline, further increased the HCP LRV to 2.15. The peptide-based adsorbent also showed a remarkable performance in terms of removal of Mab aggregates; unlike Protein A, in fact, HWRGWV was found to bind only monomeric IgG. Collectively, these results demonstrate the potential of peptide-based adsorbents as alternative to Protein A for the purification of therapeutic antibodies.
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Affiliation(s)
- Tuhidul Islam
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA.
- Biomanufacturing Training and Education Center (BTEC), North Carolina State University, Raleigh, NC 27695-7928, USA.
| | - Amith D Naik
- Biomanufacturing Training and Education Center (BTEC), North Carolina State University, Raleigh, NC 27695-7928, USA.
| | - Yasuhiro Hashimoto
- Department of Research and Development, Fuji Silysia Chemical LTD, Kasugai Aichi 487-0013, Japan.
| | - Stefano Menegatti
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA.
- Biomanufacturing Training and Education Center (BTEC), North Carolina State University, Raleigh, NC 27695-7928, USA.
| | - Ruben G Carbonell
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695-7905, USA.
- Biomanufacturing Training and Education Center (BTEC), North Carolina State University, Raleigh, NC 27695-7928, USA.
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16
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Perret G, Boschetti E. Aptamer affinity ligands in protein chromatography. Biochimie 2017; 145:98-112. [PMID: 29054800 DOI: 10.1016/j.biochi.2017.10.008] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2017] [Accepted: 10/12/2017] [Indexed: 02/07/2023]
Abstract
The present review deals with the place of single chain oligonucleotide ligands (aptamers) in affinity chromatography applied to proteins. Aptamers are not the only affinity ligands available but they represent an emerging and highly promising route that advantageously competes with antibodies in immunopurification processes. A historical background of affinity chromatography from the beginning of the discipline to the most recent outcomes is first presented. Then the focus is centered on aptamers which represent the last step so far to the long quest for affinity ligands associating very high specificity, availability and strong stability against most harsh cleaning agents required in chromatography. Then technologies of ligand selection from large libraries followed by the most appropriate chemical grafting approaches are described and supported by a number of bibliographic references. Experimental results assembled from relevant published paper are reported; they are selected by their practical applicability and potential use at large scale. The review concludes with specific remarks and future developments that are expected in the near future to turn this technology into a large acceptance for preparative applications.
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17
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Arora S, Saxena V, Ayyar BV. Affinity chromatography: A versatile technique for antibody purification. Methods 2016; 116:84-94. [PMID: 28012937 DOI: 10.1016/j.ymeth.2016.12.010] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Revised: 12/16/2016] [Accepted: 12/17/2016] [Indexed: 12/19/2022] Open
Abstract
Antibodies continue to be extremely utilized entities in myriad applications including basic research, imaging, targeted delivery, chromatography, diagnostics, and therapeutics. At production stage, antibodies are generally present in complex matrices and most of their intended applications necessitate purification. Antibody purification has always been a major bottleneck in downstream processing of antibodies, due to the need of high quality products and associated high costs. Over the years, extensive research has focused on finding better purification methodologies to overcome this holdup. Among a plethora of different techniques, affinity chromatography is one of the most selective, rapid and easy method for antibody purification. This review aims to provide a detailed overview on affinity chromatography and the components involved in purification. An array of support matrices along with various classes of affinity ligands detailing their underlying working principles, together with the advantages and limitations of each system in purifying different types of antibodies, accompanying recent developments and important practical methodological considerations to optimize purification procedure are discussed.
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Affiliation(s)
- Sushrut Arora
- Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Vikas Saxena
- Center for Vascular and Inflammatory Diseases, School of Medicine, University of Maryland, Baltimore, MD 21201, USA
| | - B Vijayalakshmi Ayyar
- Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
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18
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Kang HJ, Choe W, Min JK, Lee YM, Kim BM, Chung SJ. Cyclic peptide ligand with high binding capacity for affinity purification of immunoglobulin G. J Chromatogr A 2016; 1466:105-12. [DOI: 10.1016/j.chroma.2016.09.007] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2016] [Revised: 08/30/2016] [Accepted: 09/02/2016] [Indexed: 11/16/2022]
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19
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Perret G, Santambien P, Boschetti E. The quest for affinity chromatography ligands: are the molecular libraries the right source? J Sep Sci 2015; 38:2559-72. [DOI: 10.1002/jssc.201500285] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Revised: 04/26/2015] [Accepted: 05/10/2015] [Indexed: 12/15/2022]
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Tu Z, Xu Y, Fu J, Huang Z, Wang Y, Liu B, Tao Y. Preparation and characterization of novel IgG affinity resin coupling anti-Fc camelid single-domain antibodies. J Chromatogr B Analyt Technol Biomed Life Sci 2015; 983-984:26-31. [DOI: 10.1016/j.jchromb.2014.12.031] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2014] [Revised: 12/25/2014] [Accepted: 12/30/2014] [Indexed: 11/26/2022]
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21
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Islam T, Fernández-Lahore M. A modular approach to multifunctional polypeptide/ceramic fluorapatite-based self-assembled system in affinity chromatography for the purification of human Immunoglobulin G. J Mol Recognit 2015; 28:191-200. [DOI: 10.1002/jmr.2414] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2013] [Revised: 07/17/2014] [Accepted: 07/30/2014] [Indexed: 01/13/2023]
Affiliation(s)
- Tuhidul Islam
- Department of Biochemical Engineering, School of Engineering and Science; Jacobs University Bremen; Campus Ring 1 28759 Bremen Germany
| | - Marcelo Fernández-Lahore
- Department of Biochemical Engineering, School of Engineering and Science; Jacobs University Bremen; Campus Ring 1 28759 Bremen Germany
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22
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Dimartino S, Boi C, Sarti GC. Scale-up of affinity membrane modules: comparison between lumped and physical models. J Mol Recognit 2015; 28:180-90. [DOI: 10.1002/jmr.2406] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Revised: 02/18/2014] [Accepted: 06/21/2014] [Indexed: 11/06/2022]
Affiliation(s)
- Simone Dimartino
- Department of Chemical and Process Engineering and Biomolecular Interaction Centre (BIC); University of Canterbury; Christchurch New Zealand
| | - Cristiana Boi
- DICAM-Dipartimento di Ingegneria Civile, Chimica, Ambientale e dei Materiali; Alma Mater Studiorum-Università di Bologna; via Terracini 28 40131 Bologna Italy
| | - Giulio C. Sarti
- DICAM-Dipartimento di Ingegneria Civile, Chimica, Ambientale e dei Materiali; Alma Mater Studiorum-Università di Bologna; via Terracini 28 40131 Bologna Italy
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23
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Boschetti E, Righetti PG. Mixed-bed affinity chromatography: principles and methods. Methods Mol Biol 2015; 1286:131-158. [PMID: 25749952 DOI: 10.1007/978-1-4939-2447-9_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Mixed-bed chromatography is far from being a well-established technology within the panoply of bioseparation tools. Composed of an assembly of distinct sorbents that are mixed in a single bed, they have been mostly developed in the last decade for the reduction of dynamic concentration range where they allowed discovering many low-copy proteins within very complex proteomes. Other interesting preparative applications of mixed-bed chromatography have since been developed. In this chapter the basic concepts first and then detailed application recipes are described for (1) the reduction of protein dynamic concentration range, (2) the removal of impurity traces at the last stage of a biopurification process, and (3) the selection and use of sorbents as mixed bed in protein purification.
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Affiliation(s)
- Egisto Boschetti
- JAM-Conseil, 9-11 rue Boutard, 92200, Neuilly sur Seine, France,
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24
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Application of peptide chromatography for the isolation of antibodies from bovine skim milk, acid whey and colostrum. FOOD AND BIOPRODUCTS PROCESSING 2014. [DOI: 10.1016/j.fbp.2014.01.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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25
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Wu Q, Lin DQ, Zhang QL, Gao D, Yao SJ. Evaluation of a PEG/hydroxypropyl starch aqueous two-phase system for the separation of monoclonal antibodies from cell culture supernatant. J Sep Sci 2014; 37:447-53. [DOI: 10.1002/jssc.201300894] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2013] [Revised: 11/24/2013] [Accepted: 12/01/2013] [Indexed: 11/07/2022]
Affiliation(s)
- Qiang Wu
- State Key Laboratory of Chemical Engineering; Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou China
| | - Dong-Qiang Lin
- State Key Laboratory of Chemical Engineering; Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou China
| | - Qi-Lei Zhang
- State Key Laboratory of Chemical Engineering; Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou China
| | - Dong Gao
- Key Laboratory of Synthetic and Natural Functional Molecular Chemistry of Ministry of Education; Institute of Modern Separation Science; Northwest University; Shaanxi Key Laboratory of Modern Separation Science; Xi'an China
| | - Shan-Jing Yao
- State Key Laboratory of Chemical Engineering; Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou China
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26
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Maltezos A, Platis D, Vlachakis D, Kossida S, Marinou M, Labrou NE. Design, synthesis and application of benzyl-sulfonate biomimetic affinity adsorbents for monoclonal antibody purification from transgenic corn. J Mol Recognit 2013; 27:19-31. [DOI: 10.1002/jmr.2327] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2013] [Revised: 08/08/2013] [Accepted: 09/09/2013] [Indexed: 01/12/2023]
Affiliation(s)
- Anastasios Maltezos
- Laboratory of Enzyme Technology; Department of Biotechnology; School of Food, Biotechnology and Development, Agricultural University of Athens; 75 Iera Odos GR 118 55 Athens Greece
| | - Dimitris Platis
- Laboratory of Enzyme Technology; Department of Biotechnology; School of Food, Biotechnology and Development, Agricultural University of Athens; 75 Iera Odos GR 118 55 Athens Greece
| | - Dimitrios Vlachakis
- Bioinformatics & Medical Informatics Laboratory; Biomedical Research Foundation of the Academy of Athens; 11527 Athens Greece
| | - Sophia Kossida
- Bioinformatics & Medical Informatics Laboratory; Biomedical Research Foundation of the Academy of Athens; 11527 Athens Greece
| | - Marigianna Marinou
- Laboratory of Enzyme Technology; Department of Biotechnology; School of Food, Biotechnology and Development, Agricultural University of Athens; 75 Iera Odos GR 118 55 Athens Greece
| | - Nikolaos E. Labrou
- Laboratory of Enzyme Technology; Department of Biotechnology; School of Food, Biotechnology and Development, Agricultural University of Athens; 75 Iera Odos GR 118 55 Athens Greece
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27
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Screening of peptide ligands that bind to the Fc region of IgG using peptide array and its application to affinity purification of antibody. Biochem Eng J 2013. [DOI: 10.1016/j.bej.2013.06.017] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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28
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Dong S, Chen L, Dai B, Johnson W, Ye J, Shen S, Yun J, Yao K, Lin DQ, Yao SJ. Isolation of immunoglobulin G from bovine milk whey by poly(hydroxyethyl methacrylate)-based anion-exchange cryogel. J Sep Sci 2013; 36:2387-93. [DOI: 10.1002/jssc.201300306] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2013] [Revised: 05/14/2013] [Accepted: 05/14/2013] [Indexed: 11/09/2022]
Affiliation(s)
- Shasha Dong
- Key Laboratory for Green Processing of Chemical Engineering of the Xinjiang Bingtuan; School of Chemistry and Chemical Engineering; Shihezi University; Shihezi P. R. China
| | - Liang Chen
- Key Laboratory for Green Processing of Chemical Engineering of the Xinjiang Bingtuan; School of Chemistry and Chemical Engineering; Shihezi University; Shihezi P. R. China
| | - Bin Dai
- Key Laboratory for Green Processing of Chemical Engineering of the Xinjiang Bingtuan; School of Chemistry and Chemical Engineering; Shihezi University; Shihezi P. R. China
| | | | - Jialei Ye
- State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology; College of Chemical Engineering and Materials Science; Zhejiang University of Technology; Hangzhou P. R. China
| | - Shaochuan Shen
- State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology; College of Chemical Engineering and Materials Science; Zhejiang University of Technology; Hangzhou P. R. China
| | - Junxian Yun
- State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology; College of Chemical Engineering and Materials Science; Zhejiang University of Technology; Hangzhou P. R. China
| | - Kejian Yao
- State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology; College of Chemical Engineering and Materials Science; Zhejiang University of Technology; Hangzhou P. R. China
| | - Dong-Qiang Lin
- Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou P. R. China
| | - Shan-Jing Yao
- Department of Chemical and Biological Engineering; Zhejiang University; Hangzhou P. R. China
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29
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Wu Q, Lin DQ, Yao SJ. Evaluation of poly(ethylene glycol)/hydroxypropyl starch aqueous two-phase system for immunoglobulin G extraction. J Chromatogr B Analyt Technol Biomed Life Sci 2013; 928:106-12. [DOI: 10.1016/j.jchromb.2013.03.020] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2013] [Revised: 03/17/2013] [Accepted: 03/20/2013] [Indexed: 10/27/2022]
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