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Klimenko K, Carrera GVSM. QSPR modeling of selectivity at infinite dilution of ionic liquids. J Cheminform 2021; 13:83. [PMID: 34702358 PMCID: PMC8549394 DOI: 10.1186/s13321-021-00562-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 10/16/2021] [Indexed: 11/25/2022] Open
Abstract
The intelligent choice of extractants and entrainers can improve current mixture separation techniques allowing better efficiency and sustainability of chemical processes that are both used in industry and laboratory practice. The most promising approach is a straightforward comparison of selectivity at infinite dilution between potential candidates. However, selectivity at infinite dilution values are rarely available for most compounds so a theoretical estimation is highly desired. In this study, we suggest a Quantitative Structure–Property Relationship (QSPR) approach to the modelling of the selectivity at infinite dilution of ionic liquids. Additionally, auxiliary models were developed to overcome the potential bias from big activity coefficient at infinite dilution from the solute. Data from SelinfDB database was used as training and internal validation sets in QSPR model development. External validation was done with the data from literature. The selection of the best models was done using decision functions that aim to diminish bias in prediction of the data points associated with the underrepresented ionic liquids or extreme temperatures. The best models were used for the virtual screening for potential azeotrope breakers of aniline + n-dodecane mixture. The subject of screening was a combinatorial library of ionic liquids, created based on the previously unused combinations of cations and anions from SelinfDB and the test set extractants. Both selectivity at infinite dilution and auxiliary models show good performance in the validation. Our models’ predictions were compared to the ones of the COSMO-RS, where applicable, displaying smaller prediction error. The best ionic liquid to extract aniline from n-dodecane was suggested.
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Affiliation(s)
- Kyrylo Klimenko
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências E Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516, Caparica, Portugal.
| | - Gonçalo V S M Carrera
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências E Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516, Caparica, Portugal
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Klimenko KO, Inês JM, Esperança JMSS, Rebelo LPN, Aires-de-Sousa J, Carrera GVSM. QSPR Modeling of Liquid-liquid Equilibria in Two-phase Systems of Water and Ionic Liquid. Mol Inform 2020; 39:e2000001. [PMID: 32469147 DOI: 10.1002/minf.202000001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Accepted: 05/11/2020] [Indexed: 11/06/2022]
Abstract
The increasing application of new ionic liquids (IL) creates the need of liquid-liquid equilibria data for both miscible and quasi-immiscible systems. In this study, equilibrium concentrations at different temperatures for ionic liquid+water two-phase systems were modeled using a Quantitative-Structure-Property Relationship (QSPR) method. Data on equilibrium concentrations were taken from the ILThermo Ionic Liquids database, curated and used to make models that predict the weight fraction of water in ionic liquid rich phase and ionic liquid in the aqueous phase as two separate properties. The major modeling challenge stems from the fact that each single IL is characterized by several data points, since equilibrium concentrations are temperature dependent. Thus, new approaches for the detection of potential data point outliers, testing set selection, and quality prediction have been developed. Training set comprised equilibrium concentration data for 67 and 68 ILs in case of water in IL and IL in water modeling, respectively. SiRMS, MOLMAPS, Rcdk and Chemaxon descriptors were used to build Random Forest models for both properties. Models were subjected to the Y-scrambling test for robustness assessment. The best models have also been validated using an external test set that is not part of the ILThermo database. A two-phase equilibrium diagram for one of the external test set IL is presented for better visualization of the results and potential derivation of tie lines.
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Affiliation(s)
- Kyrylo Oleksandrovych Klimenko
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516 Caparica, Portugal
| | - João Miguel Inês
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516 Caparica, Portugal
| | - José Manuel Silva Simões Esperança
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516 Caparica, Portugal
| | - Luís Paulo Nieto Rebelo
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516 Caparica, Portugal
| | - João Aires-de-Sousa
- LAQV/REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, 2829-516 Caparica, Portugal
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In silico identification of endogenous and exogenous agonists of Estrogen-related receptor α. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/j.comtox.2019.01.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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