1
|
Variations of the spontaneous electrical activities of the neuronal networks imposed by the exposure of electromagnetic radiations using computational map-based modeling. J Comput Neurosci 2023; 51:187-200. [PMID: 36539556 DOI: 10.1007/s10827-022-00842-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 12/01/2022] [Accepted: 12/04/2022] [Indexed: 01/15/2023]
Abstract
The interaction between neurons in a neuronal network develops spontaneous electrical activities. But the effects of electromagnetic radiation on these activities have not yet been well explored. In this study, a ring of three coupled 1-dimensional Rulkov neurons and the generated electromagnetic field (EMF) are considered to investigate how the spontaneous activities might change regarding the EMF exposure. By employing the bifurcation analysis and time series, a comprehensive view of neuronal behavioral changes due to electromagnetic inductions is provided. The main findings of this study are as follows: 1) When a neuronal network is showing a spontaneous chaotic firing manner (without any external stimuli), a generated magnetic field inhibits this type of behavior. In fact, EMF completely eliminated the chaotic intrinsic behaviors of the neuronal loop. 2) When the network is exhibiting regular period-3 spiking patterns, the generated magnetic field changes its firing pattern to chaotic spiking, which is similar to epileptic seizures. 3) With weak synaptic connections, electromagnetic radiation inhibits and suppresses neuronal activities. 4) If the external magnetic flux has a high amplitude, it can change the shape of the induction current according to its shape 5) when there are weak synaptic connections in the network, a high-frequency external magnetic flux engenders high-frequency fluctuations in the membrane voltages. On the whole, electromagnetic radiation changes the pattern of the spontaneous activities of neuronal networks in the brain according to synaptic strengths and initial states of the neurons.
Collapse
|
2
|
Abstract
In this protocol, we introduce an effective method for voltage-sensitive dye (VSD) loading and imaging of leech ganglia as used in Tomina and Wagenaar (2017). Dissection and dye loading procedures are the most critical steps toward successful whole-ganglion VSD imaging. The former entails the removal of the sheath that covers neurons in the segmental ganglion of the leech, which is required for successful dye loading. The latter entails gently flowing a new generation VSD, VF2.1(OMe).H, onto both sides of the ganglion simultaneously using a pair of peristaltic pumps. We expect the described techniques to translate broadly to wide-field VSD imaging in other thin and relatively transparent nervous systems.
Collapse
Affiliation(s)
- Yusuke Tomina
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, United States
| | - Daniel A Wagenaar
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, United States
| |
Collapse
|
3
|
Tomina Y, Wagenaar DA. A double-sided microscope to realize whole-ganglion imaging of membrane potential in the medicinal leech. eLife 2017; 6:29839. [PMID: 28944754 PMCID: PMC5656430 DOI: 10.7554/elife.29839] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Accepted: 09/25/2017] [Indexed: 12/15/2022] Open
Abstract
Studies of neuronal network emergence during sensory processing and motor control are greatly facilitated by technologies that allow us to simultaneously record the membrane potential dynamics of a large population of neurons in single cell resolution. To achieve whole-brain recording with the ability to detect both small synaptic potentials and action potentials, we developed a voltage-sensitive dye (VSD) imaging technique based on a double-sided microscope that can image two sides of a nervous system simultaneously. We applied this system to the segmental ganglia of the medicinal leech. Double-sided VSD imaging enabled simultaneous recording of membrane potential events from almost all of the identifiable neurons. Using data obtained from double-sided VSD imaging, we analyzed neuronal dynamics in both sensory processing and generation of behavior and constructed functional maps for identification of neurons contributing to these processes. In every animal, networks of nerve cells work together to interpret signals from the environment and to coordinate responses. Being able to record the activity of all the neurons in a brain at once would greatly advance our understanding of how the brain works. Yet it is not possible to do this for a human brain, which contains several billion neurons. The medicinal leech, on the other hand, has a much simpler nervous system. It has 21 brain-like units called segmental ganglia, which control how the parts of its body move, and each one contains about 400 neurons arranged on a single layer. The activity of large populations of neurons can be monitored using a technique called fluorescent imaging. Most fluorescent dyes, however, are not sensitive enough to report low levels of activity or fast enough to track individual nerve impulses. Also, current microscopy techniques only allow one surface to be imaged at any one time. These limitations constrain the kinds of questions that neuroscientists can ask about how networks of nerve cells function. Tomina and Wagenaar have now developed a double-sided fluorescent microscope system that allows a ganglion in a medicinal leech to be viewed from both sides at once. Using a new generation of dyes, which rapidly change their brightness as individual neurons become active or are inhibited, subtle changes in the activity of hundreds of individual neurons were monitored at the same time. In a test of the system, Tomina and Wagenaar recorded activity for different leech behaviors, like bending, swimming and crawling. For the first time, the relationships between neurons on both sides of the ganglion could be seen. This new technique for examining the activity in neuronal circuitry will allow complex networks of neurons to be studied in more detail. The data that these images generate could then be analyzed mathematically to better understand how the brain processes information from its senses and generates behavior.
Collapse
Affiliation(s)
- Yusuke Tomina
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, United States
| | - Daniel A Wagenaar
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, United States
| |
Collapse
|
4
|
Pozzi D, Ban J, Iseppon F, Torre V. An improved method for growing neurons: Comparison with standard protocols. J Neurosci Methods 2017; 280:1-10. [PMID: 28137433 DOI: 10.1016/j.jneumeth.2017.01.013] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 01/17/2017] [Accepted: 01/22/2017] [Indexed: 01/22/2023]
Abstract
BACKGROUND Since different culturing parameters - such as media composition or cell density - lead to different experimental results, it is important to define the protocol used for neuronal cultures. The vital role of astrocytes in maintaining homeostasis of neurons - both in vivo and in vitro - is well established: the majority of improved culturing conditions for primary dissociated neuronal cultures rely on astrocytes. NEW METHOD Our culturing protocol is based on a novel serum-free preparation of astrocyte - conditioned medium (ACM). We compared the proposed ACM culturing method with other two commonly used methods Neurobasal/B27- and FBS- based media. We performed morphometric characterization by immunocytochemistry and functional analysis by calcium imaging for all three culture methods at 1, 7, 14 and 60days in vitro (DIV). RESULTS ACM-based cultures gave the best results for all tested criteria, i.e. growth cone's size and shape, neuronal outgrowth and branching, network activity and synchronization, maturation and long-term survival. The differences were more pronounced when compared with FBS-based medium. Neurobasal/B27 cultures were comparable to ACM for young cultures (DIV1), but not for culturing times longer than DIV7. COMPARISON WITH EXISTING METHOD(S) ACM-based cultures showed more robust neuronal outgrowth at DIV1. At DIV7 and 60, the activity of neuronal network grown in ACM had a more vigorous spontaneous electrical activity and a higher degree of synchronization. CONCLUSIONS We propose our ACM-based culture protocol as an improved and more suitable method for both short- and long-term neuronal cultures.
Collapse
Affiliation(s)
- Diletta Pozzi
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea 265, 34136 Trieste, Italy
| | - Jelena Ban
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea 265, 34136 Trieste, Italy; Department of Biotechnology, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia
| | - Federico Iseppon
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea 265, 34136 Trieste, Italy
| | - Vincent Torre
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea 265, 34136 Trieste, Italy.
| |
Collapse
|
5
|
Wagenaar DA. A classic model animal in the 21st century: recent lessons from the leech nervous system. ACTA ACUST UNITED AC 2016; 218:3353-9. [PMID: 26538172 DOI: 10.1242/jeb.113860] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The medicinal leech (genus Hirudo) is a classic model animal in systems neuroscience. The leech has been central to many integrative studies that establish how properties of neurons and their interconnections give rise to the functioning of the animal at the behavioral level. Leeches exhibit several discrete behaviors (such as crawling, swimming and feeding) that are each relatively simple. Importantly, these behaviors can all be studied - at least at a basal level - in the isolated nervous system. The leech nervous system is particularly amenable to such studies because of its distributed nature; sensory processing and generation of behavior occur to a large degree in iterated segmental ganglia that each contain only ∼400 neurons. Furthermore, the neurons are relatively large and are arranged with stereotyped topography on the surface of the ganglion, which greatly facilitates their identification and accessibility. This Commentary provides an overview of recent work on the leech nervous system, with particular focus on circuits that underlie leech behavior. Studies that combine the unique features of the leech with modern optical and genetic techniques are also discussed. Thus, this Commentary aims to explain the continued appeal of the leech as an experimental animal in the 21st century.
Collapse
Affiliation(s)
- Daniel A Wagenaar
- University of Cincinnati, Department of Biological Sciences, Cincinnati, OH 45221-0006, USA
| |
Collapse
|
6
|
Ulloa Severino FP, Ban J, Song Q, Tang M, Bianconi G, Cheng G, Torre V. The role of dimensionality in neuronal network dynamics. Sci Rep 2016; 6:29640. [PMID: 27404281 PMCID: PMC4939604 DOI: 10.1038/srep29640] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Accepted: 06/15/2016] [Indexed: 12/26/2022] Open
Abstract
Recent results from network theory show that complexity affects several dynamical properties of networks that favor synchronization. Here we show that synchronization in 2D and 3D neuronal networks is significantly different. Using dissociated hippocampal neurons we compared properties of cultures grown on a flat 2D substrates with those formed on 3D graphene foam scaffolds. Both 2D and 3D cultures had comparable glia to neuron ratio and the percentage of GABAergic inhibitory neurons. 3D cultures because of their dimension have many connections among distant neurons leading to small-world networks and their characteristic dynamics. After one week, calcium imaging revealed moderately synchronous activity in 2D networks, but the degree of synchrony of 3D networks was higher and had two regimes: a highly synchronized (HS) and a moderately synchronized (MS) regime. The HS regime was never observed in 2D networks. During the MS regime, neuronal assemblies in synchrony changed with time as observed in mammalian brains. After two weeks, the degree of synchrony in 3D networks decreased, as observed in vivo. These results show that dimensionality determines properties of neuronal networks and that several features of brain dynamics are a consequence of its 3D topology.
Collapse
Affiliation(s)
| | - Jelena Ban
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea, 265, 34136 Trieste, Italy
| | - Qin Song
- Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-tech and Nano-bionics, Chinese Academy of Sciences, 398 Ruoshui Road, Jiangsu 215123, China
| | - Mingliang Tang
- Institute of Life Sciences, Southeast University, Sipailou 2, Nanjing 210096, China
| | - Ginestra Bianconi
- School of Mathematical Sciences, Queen Mary University of London, Mile End Rd, London E1 4NS, United Kingdom
| | - Guosheng Cheng
- Key Laboratory of Nano-Bio Interface, Suzhou Institute of Nano-tech and Nano-bionics, Chinese Academy of Sciences, 398 Ruoshui Road, Jiangsu 215123, China
| | - Vincent Torre
- Neurobiology Sector, International School for Advanced Studies (SISSA), via Bonomea, 265, 34136 Trieste, Italy
| |
Collapse
|
7
|
Nagarah JM, Stowasser A, Parker RL, Asari H, Wagenaar DA. Optically transparent multi-suction electrode arrays. Front Neurosci 2015; 9:384. [PMID: 26539078 PMCID: PMC4611137 DOI: 10.3389/fnins.2015.00384] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2015] [Accepted: 10/02/2015] [Indexed: 11/17/2022] Open
Abstract
Multielectrode arrays (MEAs) allow for acquisition of multisite electrophysiological activity with submillisecond temporal resolution from neural preparations. The signal to noise ratio from such arrays has recently been improved by substrate perforations that allow negative pressure to be applied to the tissue; however, such arrays are not optically transparent, limiting their potential to be combined with optical-based technologies. We present here multi-suction electrode arrays (MSEAs) in quartz that yield a substantial increase in the detected number of units and in signal to noise ratio from mouse cortico-hippocampal slices and mouse retina explants. This enables the visualization of stronger cross correlations between the firing rates of the various sources. Additionally, the MSEA's transparency allows us to record voltage sensitive dye activity from a leech ganglion with single neuron resolution using widefield microscopy simultaneously with the electrode array recordings. The combination of enhanced electrical signals and compatibility with optical-based technologies should make the MSEA a valuable tool for investigating neuronal circuits.
Collapse
Affiliation(s)
- John M Nagarah
- Division of Biology, California Institute of Technology Pasadena, CA, USA
| | | | - Rell L Parker
- Division of Biology, California Institute of Technology Pasadena, CA, USA
| | - Hiroki Asari
- Division of Biology, California Institute of Technology Pasadena, CA, USA
| | - Daniel A Wagenaar
- Division of Biology, California Institute of Technology Pasadena, CA, USA ; Biological Sciences, University of Cincinnati Cincinnati, OH, USA
| |
Collapse
|
8
|
Huang YL, Walker AS, Miller EW. A Photostable Silicon Rhodamine Platform for Optical Voltage Sensing. J Am Chem Soc 2015; 137:10767-76. [PMID: 26237573 DOI: 10.1021/jacs.5b06644] [Citation(s) in RCA: 142] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This paper describes the design and synthesis of a photostable, far-red to near-infrared (NIR) platform for optical voltage sensing. We developed a new, sulfonated silicon rhodamine fluorophore and integrated it with a phenylenevinylene molecular wire to create a Berkeley Red Sensor of Transmembrane potential, or BeRST 1 ("burst"). BeRST 1 is the first member of a class of far-red to NIR voltage sensitive dyes that make use of a photoinduced electron transfer (PeT) trigger for optical interrogation of membrane voltage. We show that BeRST 1 displays bright, membrane-localized fluorescence in living cells, high photostability, and excellent voltage sensitivity in neurons. Depolarization of the plasma membrane results in rapid fluorescence increases (24% ΔF/F per 100 mV). BeRST 1 can be used in conjunction with fluorescent stains for organelles, Ca(2+) indicators, and voltage-sensitive fluorescent proteins. In addition, the red-shifted spectral profile of BeRST 1, relative to commonly employed optogenetic actuators like ChannelRhodopsin2 (ChR2), which require blue light, enables optical electrophysiology in neurons. The high speed, sensitivity, photostability and long-wavelength fluorescence profiles of BeRST 1 make it a useful platform for the noninvasive, optical dissection of neuronal activity.
Collapse
Affiliation(s)
- Yi-Lin Huang
- Departments of Chemistry, ‡Molecular & Cell Biology, and §Helen Wills Neuroscience Institute, University of California , Berkeley, California 94720, United States
| | - Alison S Walker
- Departments of Chemistry, ‡Molecular & Cell Biology, and §Helen Wills Neuroscience Institute, University of California , Berkeley, California 94720, United States
| | - Evan W Miller
- Departments of Chemistry, ‡Molecular & Cell Biology, and §Helen Wills Neuroscience Institute, University of California , Berkeley, California 94720, United States
| |
Collapse
|