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Guimaraes GJ, Saad JG, Annavarapu V, Bartlett MG. Mobile Phase Aging and Its Impact on Electrospray Ionization of Oligonucleotides. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2023; 34:2691-2699. [PMID: 37978939 DOI: 10.1021/jasms.3c00264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2023]
Abstract
The implementation of fluoroalcohol/alkylamine mobile phase systems in oligonucleotide LC-MS provides a good balance between chromatographic separations and MS sensitivity. Since its introduction, several parameters including mobile phase composition, additive concentration, alkylamine hydrophobicity, and different fluoroalcohols have been carefully evaluated and optimized. While our understanding of this mobile phase system has increased over the years, there are challenges that continue to hinder method performance and remain poorly understood. One of these challenges is the constant loss of MS sensitivity over time, commonly termed mobile phase aging. This study investigates two aging mechanisms associated with loss of MS sensitivity: alkylamine oxidation and aggregate formation. The relationship between pH, organic solvent, oxygen, and mobile phase aging is characterized, and mitigation strategies to extend mobile phase lifetime are discussed.
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Affiliation(s)
- Guilherme J Guimaraes
- Department of Pharmaceutical and Biomedical Sciences, University of Georgia College of Pharmacy, Athens, Georgia 30602, United States
| | - Jack G Saad
- Micromeritics Instrument Company, 4356 Communications Drive, Norcross, Georgia 30093, United States
| | - Vidya Annavarapu
- Department of Pharmaceutical and Biomedical Sciences, University of Georgia College of Pharmacy, Athens, Georgia 30602, United States
| | - Michael G Bartlett
- Department of Pharmaceutical and Biomedical Sciences, University of Georgia College of Pharmacy, Athens, Georgia 30602, United States
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Jameson B, Knobbe K, Glaser R. Nuclear Magnetic Resonance Study of CO 2 Capture by Fluoroalkylamines: Ammonium Ion p Ka Depression via Fluorine Modification and Thermochemistry of Carbamylation. J Org Chem 2023; 88:11534-11544. [PMID: 37531098 DOI: 10.1021/acs.joc.3c00701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/03/2023]
Abstract
We are developing energy-efficient and reversible carbon capture and release (CCR) systems that mimic the Lys201 carbamylation reaction in the active site of ribulose-1,5-bisphosphate carboxylase-oxygenase (RuBisCO). The multiequilibria scenario ammonium ion Xa ⇌ amine Xb ⇌ carbamic acid Xc ⇌ carbamate Xd requires the presence of both free amine and CO2 for carbamylation and is affected by the pKa(Xa). Two fluorination strategies aimed at ammonium ion pKa depression and low pH carbamylation were analyzed with (2,2,2-trifluoroethyl)butylamine 2b and 2,2-difluoropropylamine 3b and compared to butylamine 1b. The determination of K1 and ΔG1 of the carbamylation reactions requires the solution of multiequilibria systems of equations based on initial conditions, 1H NMR measurements of carbamylation yields over a wide pH range, and knowledge of K2-K5 values. K2 and K3 describe carbonic acid acidity, and ammonium ion acidities K4 were measured experimentally. We calibrated carbamic acid acidities K5 based on the measured value K6 of aminocarbamic acid using isodesmic reactions. The proton exchange reactions were evaluated with ab initio computations at the APFD/6-311+G* level in combination with continuum solvation models and explicit solvation. The utilities of 1-3 will be discussed as they pertain to the development of fluorine-modified RuBisCO-mimetic reversible CCR systems.
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Affiliation(s)
- Brian Jameson
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65401, United States
| | - Kari Knobbe
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65401, United States
| | - Rainer Glaser
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65401, United States
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García-Río L, Mejuto J, Pérez-Lorenzo M, Rodríguez-Dafonte P. Nitroso Group Transfer Reactions between N-Methyl-N-Nitroso-P-Toluene Sulfonamide and N-Alkylamines in CTACL Micellar Aggregates. PROGRESS IN REACTION KINETICS AND MECHANISM 2019. [DOI: 10.3184/146867806x197115] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The influence of micellar media upon the transnitrosation reaction between N-methyl-N-nitroso-p-toluensulfonamide (MNTS) and three linear alkylamines (n-octylamine (OA), N-methyl-n-octylamine (MOA) and N,N-dimethyl-n-octylamine (DMOA)) in micelles of Cetyltrimethylammonium Chloride (CTACl) has been studied. The rate constants were obtained and the pseudophase model allowed us to obtain the intrinsic reactivity constants in the aqueous pseudophase and in the micellar pseudophase (ki2 and kw2) and the binding constant of the amines to the micellar phase (Ka).
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Affiliation(s)
- L. García-Río
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - J.C. Mejuto
- Departamento de Química Física, Facultade de Ciencias, Universidade de Vigo, 32004, Ourense, Spain
| | - M. Pérez-Lorenzo
- Departamento de Química Física, Facultade de Ciencias, Universidade de Vigo, 32004, Ourense, Spain
| | - P. Rodríguez-Dafonte
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
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Montoya IA, Moldes OA, Cid A, Astray G, Gálvez JF, Mejuto JC. Influence Prediction of Alkylamines Upon Electrical Percolation of AOT-based Microemulsions Using Artificial Neural Networks. TENSIDE SURFACT DET 2015. [DOI: 10.3139/113.110399] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
AbstractSimulations for the electrical percolation of AOT/iC8/H2O w/o microemulsions added with alkylamines have been carried out by means of multilayer perceptron. Five variables have been elected as inputs: amine concentration, molecular weight, log P, hydrocarbon chain length (as number of carbons), and pKa. As a result, a neural model consisting in five input neurons, two middle layers (with fifteen and ten neurons respectively) and one output neuron was chosen because of its better performance, with a RMSE of 0.54 °C for the prediction set, with R2 = 0.9976.
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Affiliation(s)
- Iago Antonio Montoya
- 1Department of Physical Chemistry, Faculty of Sciences, University of Vigo, Ourense, Spain
| | - Oscar Adrían Moldes
- 1Department of Physical Chemistry, Faculty of Sciences, University of Vigo, Ourense, Spain
| | - Antonio Cid
- 2Chemistry Department, Requimte-CQFB, Faculty of Science and Technology, New University of Lisbon, Caparica. Portugal
| | - Gonzalo Astray
- 1Department of Physical Chemistry, Faculty of Sciences, University of Vigo, Ourense, Spain
| | | | - Juan Carlos Mejuto
- 1Department of Physical Chemistry, Faculty of Sciences, University of Vigo, Ourense, Spain
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Micellar effect on pentavalent vanadium oxidation of formaldehyde to formic acid in aqueous acid media at room temperature. RESEARCH ON CHEMICAL INTERMEDIATES 2014. [DOI: 10.1007/s11164-014-1635-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Astray G, Cid A, Manso JA, Mejuto JC, Moldes O, Morales J, Quintás J. N-Alkylamines-Based Micelles Aggregation Number Determination by Fluorescence Techniques. J SOLUTION CHEM 2011. [DOI: 10.1007/s10953-011-9775-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Astray G, Cid A, Manso JA, Mejuto JC, Moldes OA, Morales J. Alkaline Fading of Triarylmethyl Carbocations in Self-Assembly Microheterogeneous Media. PROGRESS IN REACTION KINETICS AND MECHANISM 2011. [DOI: 10.3184/146867811x12984793755693] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This review reports on the alkaline fading of crystal violet and other related carbocations in the presence of different microheterogeneous media (micelles, microemulsions and vesicles).
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Affiliation(s)
- G. Astray
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
| | - A. Cid
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
| | - J. A. Manso
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
| | - J. C. Mejuto
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
| | - O. A. Moldes
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
| | - J. Morales
- Physical Chemistry Department, Faculty of Science, University of Vigo at Ourense,32004-Ourense, Spain
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Faustino CM, Calado AR, Garcia-Rio L. Dimeric and monomeric surfactants derived from sulfur-containing amino acids. J Colloid Interface Sci 2010; 351:472-7. [DOI: 10.1016/j.jcis.2010.08.007] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2010] [Revised: 08/01/2010] [Accepted: 08/03/2010] [Indexed: 10/19/2022]
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Influence of colloid suspensions of humic acids on the alkaline hydrolysis of N-methyl-N-nitroso-p-toluene sulfonamide. INT J CHEM KINET 2010. [DOI: 10.1002/kin.20481] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Faustino CMC, Calado ART, Garcia-Rio L. New Urea-Based Surfactants Derived from α,ω-Amino Acids. J Phys Chem B 2009; 113:977-82. [DOI: 10.1021/jp807396k] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Célia M. C. Faustino
- iMed.UL, Faculty of Pharmacy, University of Lisbon, Av. Prof. Gama Pinto, 1649-003 Lisboa, Portugal, and Physical Chemistry Department, Faculty of Chemistry, University of Santiago de Compostela, 15782-Santiago de Compostela, Spain
| | - António R. T. Calado
- iMed.UL, Faculty of Pharmacy, University of Lisbon, Av. Prof. Gama Pinto, 1649-003 Lisboa, Portugal, and Physical Chemistry Department, Faculty of Chemistry, University of Santiago de Compostela, 15782-Santiago de Compostela, Spain
| | - Luís Garcia-Rio
- iMed.UL, Faculty of Pharmacy, University of Lisbon, Av. Prof. Gama Pinto, 1649-003 Lisboa, Portugal, and Physical Chemistry Department, Faculty of Chemistry, University of Santiago de Compostela, 15782-Santiago de Compostela, Spain
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Arias-Estevez M, Astray G, Cid A, Fernández-Gándara D, García-Río L, Mejuto JC. Influence of colloid suspensions of humic acids upon the alkaline fading of carbocations. J PHYS ORG CHEM 2008. [DOI: 10.1002/poc.1317] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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García-Río L, Leis JR, Mejuto JC, Mosquera V, Rodríguez-Dafonte P. Stability of mixed micelles of cetylpyridinium chloride and linear primary alkylamines. Colloids Surf A Physicochem Eng Asp 2007. [DOI: 10.1016/j.colsurfa.2007.01.006] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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14
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García-Río L, Leis JR, López-Fontán JL, Mejuto JC, Mosquera V, Rodríguez-Dafonte P. Mixed micelles of alkylamines and cetyltrimethylammonium chloride. J Colloid Interface Sci 2005; 289:521-9. [PMID: 15907863 DOI: 10.1016/j.jcis.2005.03.084] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2004] [Revised: 02/22/2005] [Accepted: 03/30/2005] [Indexed: 11/20/2022]
Abstract
The influence of chain length and the nature of the head group on the composition of micelles of a binary mixture of cetyltrimethylammonium chloride with both unsubstituted and N-substituted n-octyl, n-decyl, and n-lauryl amines was established from the variation of the critical micelle concentration (cmc) as a function of the solution composition. A synergistic effect was observed in all instances that were found to be correlated with chain length and the type of N-substituent on the alkylamine head group. Experimental data were compared with theoretical predictions based on the equilibrium between micelles and monomers in solution. The Motomura treatment was used to determine the composition of each compound in the mixed micelles (Xi(m)). Mixing nonideality was expressed in terms of the molecular interaction parameter (beta12) as determined using the theory of Holland and Rubingh. Finally, the molecular thermodynamic model for mixed surfactant systems developed by Puvvada and Blankschtein was used to estimate the micellization free energy (DeltaGM) and to evaluate the synergistic phenomenon.
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Affiliation(s)
- L García-Río
- Departamento de Química Física, Facultad de Química, Universidad de Santiago, 15782 Santiago, Spain.
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