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Ballinas-Indilí R, Nicolás-Vázquez MI, Martínez J, Ramírez-Apan MT, Álvarez-Toledano C, Toscano A, Hernández-Rodríguez M, Mera Jiménez E, Miranda Ruvalcaba R. Synthesis, Cytotoxic Activity and In Silico Study of Novel Dihydropyridine Carboxylic Acids Derivatives. Int J Mol Sci 2023; 24:15414. [PMID: 37895094 PMCID: PMC10607468 DOI: 10.3390/ijms242015414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 10/11/2023] [Accepted: 10/18/2023] [Indexed: 10/29/2023] Open
Abstract
To aid the possible prevention of multidrug resistance in tumors and cause lower toxicity, a set of sixteen novel dihydropyridine carboxylic acids derivatives 3a-p were produced; thus, the activation of various ynones with triflic anhydride was performed, involving a nucleophilic addition of several bis(trimethylsilyl) ketene acetals, achieving good yields requiring easy workup. The target molecules were unequivocally characterized by common spectroscopic methods. In addition, two of the tested compounds (3a, and 3b) were selected to perform in silico studies due to the highest cytotoxic activity towards the HCT-15 cell line (7.94 ± 1.6 μM and 9.24 ± 0.9 μM, respectively). Employing theoretical calculations with density functional theory (DFT) using the B3LYP/6-311++G(d,p) showed that the molecular parameters correlate adequately with the experimental results. In contrast, predictions employing Osiris Property Explorer showed that compounds 3a and 3b present physicochemical characteristics that would likely make it an orally active drug. Moreover, the performance of Docking studies with proteins related to the apoptosis pathway allowed a proposal of which compounds could interact with PARP-1 protein. Pondering the obtained results (synthesis, in silico, and cytotoxic activity) of the target compounds, they can be judged as suitable antineoplastic agent candidates.
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Affiliation(s)
- Ricardo Ballinas-Indilí
- Departamento de Ciencias Químicas, Facultad de Estudios Superiores Cuautitlán Campo 1, Universidad Nacional Autónoma de México, Avenida 1o de Mayo s/n, Colonia Santa María las Torres, Cuautitlán Izcalli 54740, Mexico; (R.B.-I.); (M.I.N.-V.); (J.M.)
| | - María Inés Nicolás-Vázquez
- Departamento de Ciencias Químicas, Facultad de Estudios Superiores Cuautitlán Campo 1, Universidad Nacional Autónoma de México, Avenida 1o de Mayo s/n, Colonia Santa María las Torres, Cuautitlán Izcalli 54740, Mexico; (R.B.-I.); (M.I.N.-V.); (J.M.)
| | - Joel Martínez
- Departamento de Ciencias Químicas, Facultad de Estudios Superiores Cuautitlán Campo 1, Universidad Nacional Autónoma de México, Avenida 1o de Mayo s/n, Colonia Santa María las Torres, Cuautitlán Izcalli 54740, Mexico; (R.B.-I.); (M.I.N.-V.); (J.M.)
| | - María Teresa Ramírez-Apan
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Mexico City 04510, Mexico; (M.T.R.-A.); (C.Á.-T.); (A.T.)
| | - Cecilio Álvarez-Toledano
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Mexico City 04510, Mexico; (M.T.R.-A.); (C.Á.-T.); (A.T.)
| | - Alfredo Toscano
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Mexico City 04510, Mexico; (M.T.R.-A.); (C.Á.-T.); (A.T.)
| | - Maricarmen Hernández-Rodríguez
- Laboratorio de Cultivo Celular, Sección de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Mexico City 11340, Mexico; (M.H.-R.); (E.M.J.)
| | - Elvia Mera Jiménez
- Laboratorio de Cultivo Celular, Sección de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Mexico City 11340, Mexico; (M.H.-R.); (E.M.J.)
| | - René Miranda Ruvalcaba
- Departamento de Ciencias Químicas, Facultad de Estudios Superiores Cuautitlán Campo 1, Universidad Nacional Autónoma de México, Avenida 1o de Mayo s/n, Colonia Santa María las Torres, Cuautitlán Izcalli 54740, Mexico; (R.B.-I.); (M.I.N.-V.); (J.M.)
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Escobedo-González RG, Moyers-Montoya ED, Martínez-Pérez CA, García-Casillas PE, Miranda-Ruvalcaba R, Nicolás-Vázquez MIN. In Silico Study of Novel Cyclodextrin Inclusion Complexes of Polycaprolactone and Its Correlation with Skin Regeneration. Int J Mol Sci 2023; 24:ijms24108932. [PMID: 37240276 DOI: 10.3390/ijms24108932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 04/26/2023] [Accepted: 05/04/2023] [Indexed: 05/28/2023] Open
Abstract
Three novel biomaterials obtained via inclusion complexes of β-cyclodextrin, 6-deoxi-6-amino-β-cyclodextrin and epithelial growth factor grafted to 6-deoxi-6-amino-β-cyclodextrin with polycaprolactone. Furthermore, some physicochemical, toxicological and absorption properties were predicted using bioinformatics tools. The electronic, geometrical and spectroscopical calculated properties agree with the properties obtained via experimental methods, explaining the behaviors observed in each case. The interaction energy was obtained, and its values were -60.6, -20.9 and -17.1 kcal/mol for β-cyclodextrin/polycaprolactone followed by the 6-amino-β-cyclodextrin-polycaprolactone complex and finally the complex of epithelial growth factor anchored to 6-deoxy-6-amino-β-cyclodextrin/polycaprolactone. Additionally, the dipolar moments were calculated, achieving values of 3.2688, 5.9249 and 5.0998 Debye, respectively, and in addition the experimental wettability behavior of the studied materials has also been explained. It is important to note that the toxicological predictions suggested no mutagenic, tumorigenic or reproductive effects; moreover, an anti-inflammatory effect has been shown. Finally, the improvement in the cicatricial effect of the novel materials has been conveniently explained by comparing the poly-caprolactone data obtained in the experimental assessments.
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Affiliation(s)
- René Gerardo Escobedo-González
- Department of Industrial Maintenance, Technological University of the City of Juárez, Av. Universidad Tecnológica No. 3051, Col. Lote Bravo II, Ciudad Juárez 32695, Mexico
| | - Edgar Daniel Moyers-Montoya
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
| | - Carlos Alberto Martínez-Pérez
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
| | - Perla Elvia García-Casillas
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
- Applied Chemistry Research Center, Blvd. Enrique Reyna Hermosillo No. 140, Saltillo 25294, Mexico
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Martínez J, Rodríguez MH, Ruvalcaba RM, Escobedo‐González R, Nicolás‐Vázquez MI. Can (
S
)‐Stereoisomers of Perezone and Its Derivatives Show Similar Activity to Its (
R
)‐Stereoisomers? A Computational Characterization and Docking Study. ChemistrySelect 2021. [DOI: 10.1002/slct.202102539] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Joel Martínez
- Facultad de Ciencias Químicas Universidad Autónoma de San Luis Potosí San Luis Potosí 78210 México
| | - Maricarmen Hernández Rodríguez
- Laboratorio de Cultivo Celular Escuela Superior de Medicina Instituto Politécnico Nacional Plan de San Luis y Díaz Mirón s/n Ciudad de México México
| | - René Miranda Ruvalcaba
- Departamento de Ciencias Químicas Facultad de Estudios Superiores Cuautitlán Campo 1 Universidad Nacional Autónoma de México Avenida 1o de Mayo s/n, Colonia Santa María las Torres Cuautitlán Izcalli Estado de México 54740 México
| | - René Escobedo‐González
- Departamento de Mantenimiento Industrial y Nanotecnología Universidad Tecnológica de Ciudad Juárez Av. Universidad Tecnológica No. 3051, Col. Lote Bravo II, Cd. Juárez Chihuahua 32695 México
| | - María Inés Nicolás‐Vázquez
- Departamento de Ciencias Químicas Facultad de Estudios Superiores Cuautitlán Campo 1 Universidad Nacional Autónoma de México Avenida 1o de Mayo s/n, Colonia Santa María las Torres Cuautitlán Izcalli Estado de México 54740 México
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Méndez-Albores A, Escobedo-González R, Aceves-Hernández JM, García-Casillas P, Nicolás-Vázquez MI, Miranda-Ruvalcaba R. A Theoretical Study of the Adsorption Process of B-aflatoxins Using Pyracanthakoidzumii (Hayata) Rehder Biomasses. Toxins (Basel) 2020; 12:E283. [PMID: 32354011 PMCID: PMC7290487 DOI: 10.3390/toxins12050283] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2020] [Revised: 04/11/2020] [Accepted: 04/24/2020] [Indexed: 12/03/2022] Open
Abstract
Employing theoretical calculations with density functional theory (DFT) using the B3LYP/6-311++G(d,p) functional and basis set, the interaction of the aflatoxin B1 (AFB1) molecule and the functional groups present in the Pyracantha koidzumii biosorbent was investigated. Dissociation free energy and acidity equilibrium constant values were obtained theoretically both in solution (water) and gas phases. Additionally, the molecular electrostatic potential for the protonated molecules was calculated to verify the reactivity. Thus, methanol (hydroxyl group), methylammonium ion (amino group), acetate ion (carboxyl group), and acetone (carbonyl group), were used as representatives of the substrates present in the biomass; these references were considered using the corresponding protonated or unprotonated forms at a pH value of 5. The experimental infrared spectrophotometric data suggested the participation of these functional groups in the AFB1 biosorption process, indicating that the mechanism was dominated by electrostatic interactions between the charged functional groups and the positively charged AFB1 molecule. The theoretical determination indicated that the carboxylate ion provided the highest interaction energy with the AFB1 molecule. Consequently, an enriched biosorbent with compounds containing carboxyl groups could improve the yield of the AFB1 adsorption when using in vitro and in vivo trials.
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Affiliation(s)
- Abraham Méndez-Albores
- UNAM–FESC, Campus 4, Multidisciplinary Research Unit L14 (Food, Mycotoxins and Mycotoxicosis), Cuautitlan Izcalli 54714, Mexico;
| | - René Escobedo-González
- Department of industrial maintenance and nanotechnology, Technological University of Juarez City, Ciudad Juarez, Chihuahua 32695, Mexico;
| | - Juan Manuel Aceves-Hernández
- UNAM–FESC, Campus 1, Chemical Sciences Department, Cuautitlan Izcalli C. P. 54740, Mexico; (J.M.A.-H.); (R.M.-R.)
| | - Perla García-Casillas
- Institute of Engineering and Technology, Autonomous University of the City of Juarez, UACJ, City Juarez, Chihuahua 32584, Mexico;
| | - María Inés Nicolás-Vázquez
- UNAM–FESC, Campus 1, Chemical Sciences Department, Cuautitlan Izcalli C. P. 54740, Mexico; (J.M.A.-H.); (R.M.-R.)
| | - René Miranda-Ruvalcaba
- UNAM–FESC, Campus 1, Chemical Sciences Department, Cuautitlan Izcalli C. P. 54740, Mexico; (J.M.A.-H.); (R.M.-R.)
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