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Mondal M, Saha A. Dithiocarbamate as a Carbonyl Alternative in Pd-Catalyzed Carbonylative Homocoupling of Organoboronic Acids. J Org Chem 2025; 90:52-58. [PMID: 39701947 DOI: 10.1021/acs.joc.4c01678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2024]
Abstract
We have developed a novel protocol for carbonylative homocoupling of arylboronic acids using dithiocarbamate esters as the carbonyl alternative. A series of arylboronic acids underwent smooth reaction with dithiocarbamate ester (Me2NCS2Me) in the presence of Pd(PPh3)2Cl2 catalyst, Cu(OAc)2·H2O additive, and Na2CO3 in DCE solvent, producing the biaryl ketones efficiently. The mechanism has been studied with the help of several control experiments that reveal the probability of thioamide intermediacy. Chemoselective homocoupling allows the postsynthetic modification of the product.
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Affiliation(s)
- Manas Mondal
- Department of Chemistry, Jadavpur University, Kolkata 700032, India
| | - Amit Saha
- Department of Chemistry, Jadavpur University, Kolkata 700032, India
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2
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Bag S, Liu J, Patil S, Bonowski J, Koska S, Schölermann B, Zhang R, Wang L, Pahl A, Sievers S, Brieger L, Strohmann C, Ziegler S, Grigalunas M, Waldmann H. A divergent intermediate strategy yields biologically diverse pseudo-natural products. Nat Chem 2024; 16:945-958. [PMID: 38365941 PMCID: PMC11164679 DOI: 10.1038/s41557-024-01458-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 01/22/2024] [Indexed: 02/18/2024]
Abstract
The efficient exploration of biologically relevant chemical space is essential for the discovery of bioactive compounds. A molecular design principle that possesses both biological relevance and structural diversity may more efficiently lead to compound collections that are enriched in diverse bioactivities. Here the diverse pseudo-natural product (PNP) strategy, which combines the biological relevance of the PNP concept with synthetic diversification strategies from diversity-oriented synthesis, is reported. A diverse PNP collection was synthesized from a common divergent intermediate through developed indole dearomatization methodologies to afford three-dimensional molecular frameworks that could be further diversified via intramolecular coupling and/or carbon monoxide insertion. In total, 154 PNPs were synthesized representing eight different classes. Cheminformatic analyses showed that the PNPs are structurally diverse between classes. Biological investigations revealed the extent of diverse bioactivity enrichment of the collection in which four inhibitors of Hedgehog signalling, DNA synthesis, de novo pyrimidine biosynthesis and tubulin polymerization were identified from four different PNP classes.
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Affiliation(s)
- Sukdev Bag
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
- Faculty of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany
| | - Jie Liu
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Sohan Patil
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Jana Bonowski
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Sandra Koska
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Beate Schölermann
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Ruirui Zhang
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Lin Wang
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Axel Pahl
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
- Compound Management and Screening Center, Dortmund, Germany
| | - Sonja Sievers
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
- Compound Management and Screening Center, Dortmund, Germany
| | - Lukas Brieger
- Faculty of Chemistry and Chemical Biology, Inorganic Chemistry, TU Dortmund University, Dortmund, Germany
| | - Carsten Strohmann
- Faculty of Chemistry and Chemical Biology, Inorganic Chemistry, TU Dortmund University, Dortmund, Germany
| | - Slava Ziegler
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Michael Grigalunas
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Herbert Waldmann
- Department of Chemical Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany.
- Faculty of Chemistry and Chemical Biology, TU Dortmund University, Dortmund, Germany.
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3
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Tian Q, Yin X, Sun R, Wu X, Li Y. The lower the better: Efficient carbonylative reactions under atmospheric pressure of carbon monoxide. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2022.214900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Halder P, Talukdar V, Iqubal A, Das P. Palladium-Catalyzed Aminocarbonylation of Isoquinolines Utilizing Chloroform-COware Chemistry. J Org Chem 2022; 87:13965-13979. [PMID: 36217780 DOI: 10.1021/acs.joc.2c01629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The carbonyl group forms an integral part of several drug molecules and materials; hence, synthesis of carbonylated compounds remains an intriguing area of research for synthetic and medicinal chemists. Handling toxic CO gas has several limitations; thus, using safe and effective techniques for in or ex situ generation of carbon monoxide from nontoxic and cheap precursors is highly desirable. Among several precursors that have been explored for the generation of CO gas, chloroform can prove to be a promising CO surrogate due to its cost-effectiveness and ready availability. However, the one-pot chloroform-based carbonylation reaction requires strong basic conditions for hydrolysis of chloroform that may affect functional group tolerability of substrates and scale-up reactions. These limitations can be overcome by a two-chamber reactor (COware) that can be utilized for ex situ CO generation through hydrolysis of chloroform in one chamber and facilitating safe carbonylation reactions in another chamber under mild conditions. The versatility of this "Chloroform-COware" technique is explored through palladium-catalyzed aminocarbonylation of medicinally relevant heterocyclic cores, viz., isoquinoline and quinoline.
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Affiliation(s)
- Pallabi Halder
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Vishal Talukdar
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Ashif Iqubal
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Parthasarathi Das
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
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5
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Ziccarelli I, Mancuso R, Giacalone F, Calabrese C, La Parola V, De Salvo A, Della Ca' N, Gruttadauria M, Gabriele B. Heterogenizing palladium tetraiodide catalyst for carbonylation reactions. J Catal 2022. [DOI: 10.1016/j.jcat.2022.08.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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6
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Tan Y, Lang J, Chen L, Tang M, Yu Z, Mi P, Zheng X. The Sonogashira Carbonylation Reaction between Aromatic Bromide and Alkyne with
N
‐Formylsaccharin as a CO Source. ChemistrySelect 2022. [DOI: 10.1002/slct.202201063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Yan Tan
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
| | - Jia‐Jia Lang
- Lab of Protein Structure and Function, Hengyang Medical School University of South China Hengyang Hunan 421001, China
| | - Li‐Mei Chen
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
| | - Mei‐Lun Tang
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
| | - Zhi‐Xing Yu
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
| | - Peng‐Bing Mi
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
| | - Xing Zheng
- Group of Lead Compound Department of Pharmacy Hunan Provincial Key Laboratory of Tumor Microenvironment Responsive Drug Research Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study University of South China Hengyang Hunan 421001 China
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Shaifali, Sheetal, Das P. Supported Palladium Catalyzed Carbonylative Coupling Reactions using Carbon Monoxide as C1 Source. CHEM REC 2021; 22:e202100157. [PMID: 34418288 DOI: 10.1002/tcr.202100157] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 07/23/2021] [Indexed: 12/16/2022]
Abstract
The carbonylative reactions of aryl halides, boronic acids, amines, activated alkene and alkynes under CO and supported palladium catalyzed conditions are very popular reactions for the synthesis of bioactive molecules, pharmaceuticals, polymers, peptides, intermediates and fine chemicals synthesis. Due to cost effectiveness and easy handling of recyclable supported palladium catalyst, it became more popular among researchers either working in academic institute or industry. In recent years, irrespective of poisoning effect of CO with palladium as major limitation, several advancements have been done through surface selection, designing and condition improvement to achieve high yield in the area of carbonylative coupling reactions. We hope this review will be helpful as a ready reference of last 20 years in the field of CO insertion reactions using diverse range of supported palladium catalysts under carbon monoxide or its sources as C1 source.
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Affiliation(s)
- Shaifali
- Chemical Technology Division, CSIR - Institute of Himalayan Bioresource Technology, 176061, Palampur, H. P., India.,Academy of Scientific and Innovative Research (AcSIR), 201002, Ghaziabad, India
| | - Sheetal
- Chemical Technology Division, CSIR - Institute of Himalayan Bioresource Technology, 176061, Palampur, H. P., India.,Academy of Scientific and Innovative Research (AcSIR), 201002, Ghaziabad, India
| | - Pralay Das
- Chemical Technology Division, CSIR - Institute of Himalayan Bioresource Technology, 176061, Palampur, H. P., India.,Academy of Scientific and Innovative Research (AcSIR), 201002, Ghaziabad, India
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8
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Huo Y, Qi X, Xu T, Lu W, Wu X. Heterogeneous Carbonylative Sonogashira Reaction Based on Pd/g‐C
3
N
4
Catalyst by Using Formic Acid as the CO Source. ChemistrySelect 2021. [DOI: 10.1002/slct.202102124] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Yong‐Wang Huo
- Department of Chemistry Zhejiang Sci-Tech University Hangzhou Zhejiang 310018 People's Republic of China
| | - Xinxin Qi
- Department of Chemistry Zhejiang Sci-Tech University Hangzhou Zhejiang 310018 People's Republic of China
| | - Tiefeng Xu
- National Engineering Lab for Textile Fiber Materials & Processing Technology Zhejiang Sci-Tech University Hangzhou 310018 China
| | - Wangyang Lu
- National Engineering Lab for Textile Fiber Materials & Processing Technology Zhejiang Sci-Tech University Hangzhou 310018 China
| | - Xiao‐Feng Wu
- Dalian National Laboratory for Clean Energy Dalian Institute of Chemical Physics Chinese Academy of Sciences 116023 Dalian, Liaoning China
- Leibniz-Institut für Katalyse e.V. an der Institution Universität Rostock Albert-Einstein-Straße 29a Rostock 18059 Germany
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