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Zhang C, Weintraub NL, Tang Y. Identification of Critical Molecular Pathways Induced by HDAC11 Overexpression in Cardiac Mesenchymal Stem Cells. Biomolecules 2025; 15:662. [PMID: 40427555 PMCID: PMC12109384 DOI: 10.3390/biom15050662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2025] [Revised: 04/22/2025] [Accepted: 04/30/2025] [Indexed: 05/29/2025] Open
Abstract
HDAC11, the only class IV histone deacetylase, primarily functions as a fatty acid deacylase and has been implicated in metabolic regulation, cancer stemness, and muscle regeneration. However, its role in cardiac mesenchymal stem cells (CMSCs) remains unexplored. To investigate the effects of HDAC11 overexpression on the gene regulatory networks in CMSCs, we treated mouse CMSCs with an adenoviral vector encoding human HDAC11 (Ad-HDAC11) versus adenoviral GFP (Ad-GFP) as a control. Gene expression and pathway enrichment were assessed using RNA sequencing (RNA-seq), and HDAC11 overexpression was validated at the RNA and protein levels through qRT-PCR and Western blot. RNA-seq and Gene Ontology (GO) analysis revealed that HDAC11 overexpression activated cell cycle pathways while suppressing nucleotide transport and phagolysosome-related processes. Furthermore, pHH3 protein level was increased, suggested enhanced proliferation in HDAC11-overexpressed CMSCs. qRT-PCR also confirmed the downregulation of GM11266, a long non-coding RNA, in HDAC11-overexpressing CMSCs. In summary, HDAC11 overexpression promotes transcriptional reprogramming, cell cycle progression, and CMSC proliferation, underscoring its potential role in regulating CMSC growth and division.
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Affiliation(s)
| | | | - Yaoliang Tang
- Vascular Biology Center, Department of Medicine, Medical College of Georgia, Augusta University, 1460 Laney Walker Blvd, Augusta, GA 30912, USA; (C.Z.); (N.L.W.)
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Liu X, Yu D, Yu Z, Su S, Jiang M, Zhao C. LHPP-P38 MAPK/ERK-ETS1 Axis Negative Feedback Signaling Restrains Progression in Breast Cancer. Cancer Sci 2025; 116:923-935. [PMID: 39789996 PMCID: PMC11967269 DOI: 10.1111/cas.16448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2024] [Revised: 12/03/2024] [Accepted: 12/24/2024] [Indexed: 01/12/2025] Open
Abstract
Invasion and metastasis are major causes of mortality in breast cancer (BRCA) patients. LHPP, known for its tumor-suppressive effects, has an undefined role in BRCA. We found reduced LHPP protein in BRCA tissues, with lower levels correlating with poor patient outcomes. In vitro studies show LHPP inhibits BRCA cell proliferation, migration, invasion, and stemness. In vivo xenograft models support LHPP's role in curbing tumorigenesis and lung metastasis. Mechanistically, LHPP interacts with ERK and P38 MAPK, leading to their dephosphorylation and suppression of the MAPK pathway. We also reveal ETS1, a MAPK effector, repressing LHPP mRNA transcription, suggesting a LHPP-P38 MAPK/ERK-ETS1 negative feedback loop as a key regulatory mechanism in controlling BRCA invasion and metastasis.
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Affiliation(s)
- Xu Liu
- Abdominal Radiotherapy Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
| | - Deyang Yu
- Radiophysics Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
| | - Zhen Yu
- Abdominal Radiotherapy Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
| | - Sisi Su
- Abdominal Radiotherapy Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
| | - Meixia Jiang
- Abdominal Radiotherapy Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
| | - Chunbo Zhao
- Abdominal Radiotherapy Department, Harbin Medical University Cancer HospitalHarbin Medical UniversityHarbinHeilongjiang ProvinceChina
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Liu C, Jiang J, Luo J, Zhang Y, Yang C, Shi J. ETS1 promotes cisplatin resistance of NSCLC cells by promoting GRP78 transcription. NAUNYN-SCHMIEDEBERG'S ARCHIVES OF PHARMACOLOGY 2025; 398:4633-4643. [PMID: 39521757 DOI: 10.1007/s00210-024-03574-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Accepted: 10/27/2024] [Indexed: 11/16/2024]
Abstract
Non-small cell lung cancer (NSCLC) is a common malignant tumor characterized by rapid growth and invasive power. Glucose regulatory protein 78 (GRP78) is important in cancer cell progression. Here, this study aimed to explore the effect and mechanism of GRP78 on cisplatin (DDP) resistance of NSCLC cells. qRT-PCR and Western blot detected the expression of genes and proteins. Flow cytometry was used to analyze endoplasmic reticulum stress (ERS) induced by DDP in NSCLC. Cell proliferation and apoptosis were examined using cell counting kit-8 (CCK8), cell cloning, and flow cytometry, respectively. Chromatin immunoprecipitation assay (CHIP) and dual-luciferase reporter assays were performed to determine the binding of ETS1 and GRP78 promoter. Mouse xenograft models were constructed for in vivo analysis. ERS was induced by DDP in NSCLC cells. GRP78 were upregulated in DDP-resistant NSCLC tissues, and knockdown of GRP78 suppressed DDP resistance, clone formation, promoted apoptosis, and inhibited ERS in DDP-resistant NSCLC cells. ETS1 knockdown repressed GRP78 expression and NSCLC tumor growth. Interestingly, ETS1 played a role in DDP-resistant NSCLC via GRP78. ETS1 inhibits cisplatin sensitivity of NSCLC cells by promoting GRP78 transcription.
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MESH Headings
- Endoplasmic Reticulum Chaperone BiP
- Cisplatin/pharmacology
- Carcinoma, Non-Small-Cell Lung/drug therapy
- Carcinoma, Non-Small-Cell Lung/genetics
- Carcinoma, Non-Small-Cell Lung/pathology
- Carcinoma, Non-Small-Cell Lung/metabolism
- Humans
- Proto-Oncogene Protein c-ets-1/genetics
- Proto-Oncogene Protein c-ets-1/metabolism
- Drug Resistance, Neoplasm
- Animals
- Lung Neoplasms/drug therapy
- Lung Neoplasms/genetics
- Lung Neoplasms/pathology
- Lung Neoplasms/metabolism
- Antineoplastic Agents/pharmacology
- Mice, Nude
- Heat-Shock Proteins/genetics
- Heat-Shock Proteins/metabolism
- Cell Line, Tumor
- Apoptosis/drug effects
- Mice
- Endoplasmic Reticulum Stress/drug effects
- Mice, Inbred BALB C
- Cell Proliferation/drug effects
- Transcription, Genetic
- Gene Expression Regulation, Neoplastic
- Male
- A549 Cells
- Female
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Affiliation(s)
- Cong Liu
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China
| | - Junguang Jiang
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China
| | - Junfang Luo
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China
| | - Yang Zhang
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China
| | - Chao Yang
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China
| | - Jiang Shi
- Department of Geriatric Respiratory & Sleep, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China.
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Kemmo Tsafack U, Lin CW, Ahn KW. Joint Screening for Ultra-High Dimensional Multi-Omics Data. Bioengineering (Basel) 2024; 11:1193. [PMID: 39768011 PMCID: PMC11727280 DOI: 10.3390/bioengineering11121193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2024] [Revised: 11/14/2024] [Accepted: 11/23/2024] [Indexed: 01/16/2025] Open
Abstract
Investigators often face ultra-high dimensional multi-omics data, where identifying significant genes and omics within a gene is of interest. In such data, each gene forms a group consisting of its multiple omics. Moreover, some genes may also be highly correlated. This leads to a tri-level hierarchical structured data: the cluster level, which is the group of correlated genes, the subgroup level, which is the group of omics of the same gene, and the individual level, which consists of omics. Screening is widely used to remove unimportant variables so that the number of remaining variables becomes smaller than the sample size. Penalized regression with the remaining variables after performing screening is then used to identify important variables. To screen unimportant genes, we propose to cluster genes and conduct screening. We show that the proposed screening method possesses the sure screening property. Extensive simulations show that the proposed screening method outperforms competing methods. We apply the proposed variable selection method to the TCGA breast cancer dataset to identify genes and omics that are related to breast cancer.
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Affiliation(s)
| | | | - Kwang Woo Ahn
- Division of Biostatistics, Medical College of Wisconsin (MCW), Milwaukee, WI 53226, USA; (U.K.T.); (C.-W.L.)
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Ma Y, Wang R, Liao J, Guo P, Wang Q, Li W. Xanthohumol overcomes osimertinib resistance via governing ubiquitination-modulated Ets-1 turnover. Cell Death Discov 2024; 10:454. [PMID: 39468027 PMCID: PMC11519634 DOI: 10.1038/s41420-024-02220-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 10/11/2024] [Accepted: 10/17/2024] [Indexed: 10/30/2024] Open
Abstract
Non-small cell lung cancer (NSCLC) is a prevalent and fatal malignancy with a significant global impact. Recent advancements have introduced targeted therapies like tyrosine kinase inhibitors (TKIs) such as osimertinib, which have improved patient outcomes, particularly in those with EGFR mutations. Despite these advancements, acquired resistance to TKIs remains a significant challenge. Hence, one of the current research priorities is understanding the resistance mechanisms and identifying new therapeutic targets to improve therapeutic efficacy. Herein, we identified high expression of c-Met in osimertinib-resistant NSCLC cells, and depletion of c-Met significantly inhibited the proliferation of osimertinib-resistant cells and prolonged survival in mice, suggesting c-Met as an attractive therapeutic target. To identify effective anti-tumor agents targeting c-Met, we screened a compound library containing 641 natural products and found that only xanthohumol exhibited potent inhibitory effects against osimertinib-resistant NSCLC cells. Moreover, combination treatment with xanthohumol and osimertinib sensitized osimertinib-resistant NSCLC cells to osimertinib both in vitro and in vivo. Mechanistically, xanthohumol disrupted the interaction between USP9X and Ets-1, and inhibited the phosphorylation of Ets-1 at Thr38, promoting its degradation, thereby targeting the Ets-1/c-Met signaling axis and inducing intrinsic apoptosis in osimertinib-resistant NSCLC cells. Overall, the research highlights the critical role of targeting c-Met to address osimertinib resistance in NSCLC. By demonstrating the efficacy of xanthohumol in overcoming resistance and enhancing therapeutic outcomes, this study provides valuable insights and potential new strategies for improving the clinical management of NSCLC.
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Affiliation(s)
- Ying Ma
- Department of Radiology, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
- NHC key laboratory of translantional research on transplantation medicine, Department of Transplant Surgery, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
| | - Ruirui Wang
- Department of Radiology, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
| | - Jinzhuang Liao
- Department of Radiology, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
| | - Pengfei Guo
- Department of Radiology, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
| | - Qiang Wang
- NHC key laboratory of translantional research on transplantation medicine, Department of Transplant Surgery, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China
| | - Wei Li
- Department of Radiology, The Third Xiangya Hospital of Central South University, Changsha, Hunan, People's Republic of China.
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Wu D, Li M, Wang M, Yan Z, Meng Y. PCAF acetylates AIB1 to form a transcriptional coactivator complex to promote glycolysis in endometrial cancer. Front Oncol 2024; 14:1442965. [PMID: 39301551 PMCID: PMC11410763 DOI: 10.3389/fonc.2024.1442965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Accepted: 08/14/2024] [Indexed: 09/22/2024] Open
Abstract
Introduction Despite rapid advances in molecular biology, personalized molecular therapy remains a clinical challenge for endometrial cancer due to its complex and heterogeneous tumor microenvironment.Based on clinical findings, AIB1 is a marker molecule for poor prognosis in endometrial cancer and may serve as a potential therapeutic target. Moreover, it is well known that aerobic glycolysis plays an important role in tumour energy metabolism. It has been previously reported in various hormone-related tumour studies that AIB1 affects glycolysis and promotes tumour development. However, the link between AIB1 and aerobic glycolysis in estrogen-dependent endometrial cancer remains unclear. Methods We used two endometrial cancer cell lines to validate the high expression of target genes and the effect on the proliferative and invasive capacity of the tumours and verified the pattern of interactions and epigenetic modifications by CHIP and CO-IP techniques. Finally, the conclusions were validated on homozygous mice. Results In this study, we investigated the transcriptional co-activation functions of AIB1, including its acetylation by PCAF, binding to the c-myc transcription factor, and recruitment of glycolysis-related gene promoters. Discussion Our findings provide new clues that perturbation of normal homeostatic levels of AIB1 is linked with endometrial cancer. These findings suggest that targeting AIB1-mediated regulation of aerobic glycolysis may offer a novel therapeutic approach for endometrial cancer with high AIB1 expression, opening new avenues for personalized diagnostics and treatment strategies in this disease.
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Affiliation(s)
- Di Wu
- School of Medicine, Nankai University, Tianjin, China
| | - Mingxia Li
- Department of Obstetrics and Gynecology, The First Affiliated Center of Chinese People's Liberation Army (PLA) General Hospital, Beijing, China
| | - Mingyang Wang
- Department of Obstetrics and Gynecology, The First Affiliated Center of Chinese People's Liberation Army (PLA) General Hospital, Beijing, China
| | - Zhifeng Yan
- Department of Obstetrics and Gynecology, The First Affiliated Center of Chinese People's Liberation Army (PLA) General Hospital, Beijing, China
| | - Yuanguang Meng
- School of Medicine, Nankai University, Tianjin, China
- Department of Obstetrics and Gynecology, The First Affiliated Center of Chinese People's Liberation Army (PLA) General Hospital, Beijing, China
- Department of Obstetrics and Gynecology, The Seventh Medical Center of Chinese PLA General Hospital, Beijing, China
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