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Garin AB, Rakarić D, Andrić EK, Kosanović MM, Balić T, Perdih F. Synthesis of monosubstituted dipicolinic acid hydrazide derivative and structural characterization of novel Co(III) and Cr(III) complexes. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.03.059] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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2
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Mirzaei M, Hassanpoor A, Alizadeh H, Gohari M, Blake AJ. An eight-coordinate zinc complex containing the highly pre-organized ligand 1,10-phenanthroline-2,9-dicarboxylic acid: Solvothermal synthesis, supramolecular structure and CSD studies. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.06.063] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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3
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Soleimannejad J, Sedghiniya S, Taghavi T, Nazarnia E, Janczak J. Synthesis, structural and theoretical study of two new proton transfer compounds based on diphenic acid. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.06.075] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Rambabu D, Pooja, Pradeep CP, Dhir A. Al3+- Phenanthroline Xerogel for Dual Application: Catalyst for Knoevenagel Condensation and Fluorescent Chemosensor for Azo Dyes. ChemistrySelect 2016. [DOI: 10.1002/slct.201600565] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Darsi Rambabu
- School of Basic Sciences; Indian Institute of Technology; Mandi 175001 Himachal Pradesh India
| | - Pooja
- Postgraduate Department of Chemistry; DAV College, Jalandhar; Punjab India
| | | | - Abhimanew Dhir
- School of Basic Sciences; Indian Institute of Technology; Mandi 175001 Himachal Pradesh India
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Synthesis, crystal structure, spectroscopic, thermal analyses and biological properties of novel F-block coordination polymers containing 2,2′-thiodiacetic acid and piperazine. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2016.01.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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6
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Synthesis, structures and magnetic properties of octahedral clusters of [MII6(μ6-Cl)(phenda)6]− (M=Mn, Co and Ni; phenda=1,10-phenanthroline-2,9-dicarboxylate). INORG CHEM COMMUN 2015. [DOI: 10.1016/j.inoche.2015.01.012] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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7
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Mitra M, Manna P, Das A, Seth SK, Helliwell M, Bauzá A, Choudhury SR, Frontera A, Mukhopadhyay S. On the importance of unprecedented lone pair-salt bridge interactions in Cu(II)-malonate-2-amino-5-chloropyridine-perchlorate ternary system. J Phys Chem A 2013; 117:5802-11. [PMID: 23796026 DOI: 10.1021/jp4046066] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
A Cu(II)-malonate complex with formula {(C5H6N2Cl)12[Cu(1)(C3H2O4)2][Cu(2)(C3H2O4)2(H2O)2][Cu(4)(C3H2O4)2][Cu(3)(C3H2O4)2(H2O)2](ClO4)4}n (1) [C5H6N2Cl = protonated 2-amino-5-chloropyridine, C3H4O4 = malonic acid, ClO4(-) = perchlorate] has been synthesized from purely aqueous media simple by mixing the reactants in their stoichiometric ratio, and its crystal structure has been determined by single-crystal X-ray diffraction. In 1, copper(II) malonate units form infinite 1D polymeric chains, which are interlinked by hydrogen bonds to generate 2D sheets. These 2D sheets are joined side by side primarily by various hydrogen bonds to form a 3D structure. A multitude of salt bridges are formed in this structure, connecting the protonated 2-amino-5-chloropyridines and the malonate ligands of the polymeric polyanion. Examining this characteristic of the solid-state architecture, we noticed several salt-bridge (sb)···π interactions and an unexplored interaction between the lone pair (lp) of one malonate oxygen atom and a planar salt bridge. The combination of this interaction with various other weak intermolecular forces results in a remarkably extended supramolecular network combining a wide variety of interactions involving π-systems (Cl···π, π···π) and salt bridges (sb···π and lp···sb). We describe the energetic and geometric features of this lone pair-salt-bridge interaction and explore its impact on the resultant supramolecular organization using theoretical DFT-D3 calculations.
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Affiliation(s)
- Monojit Mitra
- Department of Chemistry, Jadavpur University , Kolkata 700 032, India
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Sheshmani S, Soleimannejad J, Ghadermazi M, Shamsipur M, Ghanbari M, Motieian E, Arab Fashapoyeh M. Comparative study on MnII, NiII and CuII supramolecular complexes obtained from a proton transfer methodology: solid- and solution-state studies. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2013. [DOI: 10.1007/s13738-012-0217-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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9
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Bencini A, Lippolis V. 1,10-Phenanthroline: A versatile building block for the construction of ligands for various purposes. Coord Chem Rev 2010. [DOI: 10.1016/j.ccr.2010.04.008] [Citation(s) in RCA: 288] [Impact Index Per Article: 20.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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10
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Aghabozorg H, Roshan L, Firoozi N, Bagheri S, Ghorbani Z, Kalami S, Mirzaei M, Shokrollahi A, Ghaedi M, Aghaei R, Ghadermazi M. Syntheses, crystal, and molecular structures of Mn(II), Zn(II), and Ce(III) compounds and solution studies of Mn(II), Ni(II), Cu(II), Zn(II), Cd(II), and Ce(III) compounds obtained from a suitable proton transfer compound containing bda and pydcH2 (bda = butane-1,4-diamine; pydcH2 = pyridine-2,6-dicarboxylic acid). Struct Chem 2010. [DOI: 10.1007/s11224-010-9600-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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11
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Miao YL, Liu JL, Lin ZJ, Ou YC, Leng JD, Tong ML. Synthesis, structures, adsorption behaviour and magnetic properties of a new family of polynuclear iron clusters. Dalton Trans 2010; 39:4893-902. [DOI: 10.1039/c000126k] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Zhang XN, Li DS, Wang JJ, Zhao J, Meng CX, Wu YP, Wang YY. Synthesis, Structures, and Properties of Two Novel Supramolecular Architectures Constructed from [2,3-f]Pyrazino[1,10]phenanthroline-2,3-dicarboxylic Acid. Z Anorg Allg Chem 2009. [DOI: 10.1002/zaac.200900223] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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13
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Fan LL, Li CJ, Meng ZS, Tong ML. Metal-Mediated One-Step In Situ Oxidation of 2,9-Dimethyl-1,10-phenanthroline and Formation of Transition-Metal and Lanthanoid Complexes. Eur J Inorg Chem 2008. [DOI: 10.1002/ejic.200800499] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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14
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Dean NE, Hancock RD, Cahill CL, Frisch M. Affinity of the Highly Preorganized Ligand PDA (1,10-Phenanthroline-2,9-dicarboxylic acid) for Large Metal Ions of Higher Charge. A Crystallographic and Thermodynamic Study of PDA Complexes of Thorium(IV) and the Uranyl(VI) ion. Inorg Chem 2008; 47:2000-10. [DOI: 10.1021/ic701574j] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Nolan E. Dean
- Department of Chemistry and Biochemistry, University of North Carolina−Wilmington, Wilmington, North Carolina 28403, and Department of Chemistry, George Washington University, Washington, D.C. 20052
| | - Robert D. Hancock
- Department of Chemistry and Biochemistry, University of North Carolina−Wilmington, Wilmington, North Carolina 28403, and Department of Chemistry, George Washington University, Washington, D.C. 20052
| | - Christopher L. Cahill
- Department of Chemistry and Biochemistry, University of North Carolina−Wilmington, Wilmington, North Carolina 28403, and Department of Chemistry, George Washington University, Washington, D.C. 20052
| | - Mark Frisch
- Department of Chemistry and Biochemistry, University of North Carolina−Wilmington, Wilmington, North Carolina 28403, and Department of Chemistry, George Washington University, Washington, D.C. 20052
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Hancock RD, Melton DL, Harrington JM, McDonald FC, Gephart RT, Boone LL, Jones SB, Dean NE, Whitehead JR, Cockrell GM. Metal ion recognition in aqueous solution by highly preorganized non-macrocyclic ligands. Coord Chem Rev 2007. [DOI: 10.1016/j.ccr.2006.10.007] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Melton DL, Vanderveer DG, Hancock RD. Complexes of greatly enhanced thermodynamic stability and metal ion size-based selectivity, formed by the highly preorganized non-macrocyclic ligand 1,10-phenanthroline-2,9-dicarboxylic acid. A thermodynamic and crystallographic study. Inorg Chem 2007; 45:9306-14. [PMID: 17083230 DOI: 10.1021/ic061010p] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The metal ion-complexing properties of 1,10-phenanthroline-2,9-dicarboxylic acid (PDA) are reported. The protonation constants (pK1 = 4.75, pK2 = 2.53) and formation constants (log K(1)) for PDA with Mg(II) (3.53), Ca(II) (7.3), Sr(II) (5.61), Ba(II) (5.43), La(III) (13.5), Gd(III) (16.1), Zn(II) (11.0), Cd(II) (12.8), Pb(II) (11.4), and Cu(II) (12.8) were determined by UV-vis spectroscopy in 0.1 M NaClO4 at 25 degrees C. The log K(1) values for most of these metal ions were high enough that they were not displaced from their PDA complexes even at pH 2. The log K(1) values were determined using the UV spectra to monitor the competition with EDTA (or DTPA; EDTA = ethylendiamine tetraacetic acid, DTPA = diethylenetriamine pentaacetic acid) as a function of pH according to the equilibrium: M(EDTA) + PDA + nH+ = M(PDA) + EDTAHn. The log K1 values indicate that the rigid extended aromatic backbone of PDA leads to high levels of ligand preorganization and selectivity toward large metal ions (e.g., Ca(II), Cd(II), Gd(III)) with an ionic radius of about 1.0 A and greatly enhanced thermodynamic stability as compared to similar ligands without the reinforcing aromatic backbone. The structure of [Ca(PDA)(H2O)2].2H2O (1) is reported: orthorhombic, Fdd2, a = 44.007(9) A, b = 18.945(4) A, c = 7.2446(14) A, V = 6040(2) A(3), Z = 16, R = 0.0882. The Ca(II) ion has a coordination number of eight, lying in the plane of the tetradentate PDA, with Ca-N bonds averaging 2.55 A and Ca-O bonds to the two acetate groups of PDA averaging 2.45 A. These are very close to the normal Ca-L bonds of this type, supporting the idea that a metal ion the size of Ca(II) (ionic radius approximately 1.0 A) will fit into PDA in a low-strain manner. The remaining four coordination sites on Ca(II) in 1 come from two coordinated water molecules and a chelating carboxylate bridging from an adjacent [Ca(PDA)(H2O)2].2H2O complex. Potential applications of PDA as a ligand in biomedical applications such as Gd(III) contrast agents in MRI are discussed.
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Affiliation(s)
- Darren L Melton
- Department of Chemistry and Biochemistry, University of North Carolina, Wilmington, North Carolina 28403, USA
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Moghimi A, Moosavi S, Kordestani D, Maddah B, Shamsipur M, Aghabozorg H, Ramezanipour F, Kickelbick G. Pyridine-2,6-bis(monothiocarboxylic) acid and 2-aminopyridine as building blocks of a novel proton transfer compound: Solution and X-ray crystal structural studies. J Mol Struct 2007. [DOI: 10.1016/j.molstruc.2006.05.034] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Aghabozorg H, Ghadermazi M, Manteghi F, Nakhjavan B. A Proton Transfer Compound of Piperazine with Pyridine-2,6-dicarboxylic Acid and Its Palladium(II) and Thallium(III) Complexes – Synthesis, Characterization and Crystal Structure. Z Anorg Allg Chem 2006. [DOI: 10.1002/zaac.200600102] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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