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Katkova MA, Zabrodina GS, Rumyantcev RV, Zhigulin GY, Muravyeva MS, Shavyrin AS, Sheven DG, Ketkov SY. Praseodymium Metallacrown-Based NMR Probe for Enantioselective Discrimination of Mandelate Anions in Water. Inorg Chem 2023; 62:3827-3835. [PMID: 36802536 DOI: 10.1021/acs.inorgchem.2c04091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
Abstract
Recently, the enhanced interest in water-soluble aminohydroximate Ln(III)-Cu(II) metallacrowns (MC) is largely due to their fascinating structural chemistry, diverse properties and ease of synthesis. We examined the water-soluble praseodymium(III) alaninehydroximate complex Pr(H2O)4[15-MCCu(II)Alaha-5]·3Cl (1) as a highly effective chiral lanthanide shift reagent for NMR analysis of the biologically relevant (R/S)-mandelate (MA) anions in aqueous media. The R-MA and S-MA enantiomers can be easily discriminated in the presence of small (1.2-6.2 mol %) amounts of MC 1 by the 1H NMR signals of multiple protons exhibiting an enantiomeric shift difference (ΔΔδ) of 0.06 ppm up to 0.31 ppm. Additionally, a possibility of coordination of MA to the metallacrown was investigated by the ESI-MS technique and a Density Functional Theory modeling of the molecular electrostatic potential and noncovalent interactions.
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Affiliation(s)
- Marina A Katkova
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Galina S Zabrodina
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Roman V Rumyantcev
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Grigory Yu Zhigulin
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Maria S Muravyeva
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Andrey S Shavyrin
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
| | - Dmitriy G Sheven
- Nikolaev Institute of Inorganic Chemistry SB RAS, Novosibirsk 630090, Russia
| | - Sergey Yu Ketkov
- G. A. Razuvaev Institute of Organometallic Chemistry RAS, Nizhny Novgorod 603950, Russia
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Rumyantcev RV, Yu. Zhigulin G, Zabrodina GS, Katkova MA, Yu. Ketkov S, Fukin GK. Electron density topology in CaII–CuII alanine hydroximate metallacrowns: crystal invariom vs DFT calculation. MENDELEEV COMMUNICATIONS 2023. [DOI: 10.1016/j.mencom.2023.01.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
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Ostrowska M, Toporivska Y, Golenya IA, Shova S, Fritsky IO, Pecoraro VL, Gumienna-Kontecka E. Explaining How α-Hydroxamate Ligands Control the Formation of Cu(II)-, Ni(II)-, and Zn(II)-Containing Metallacrowns. Inorg Chem 2019; 58:16642-16659. [DOI: 10.1021/acs.inorgchem.9b02724] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
| | | | - Irina A. Golenya
- Department of Chemistry, Taras Shevchenko National University of Kyiv, 64 Volodymyrska Str., 01601 Kiev, Ukraine
| | - Sergiu Shova
- “Poni Petru” Institute of Macromolecular Chemistry, Aleea Gr. Ghica Voda 41A, 700487 Iasi, Romania
| | - Igor O. Fritsky
- Department of Chemistry, Taras Shevchenko National University of Kyiv, 64 Volodymyrska Str., 01601 Kiev, Ukraine
| | - Vincent L. Pecoraro
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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Katkova MA, Zabrodina GS, Zhigulin GY, Baranov EV, Trigub MM, Terentiev AA, Ketkov SY. The first water-soluble polynuclear metallamacrocyclic Sr(ii)-Cu(ii) complex based on simple glycinehydroximate ligands. Dalton Trans 2019; 48:10479-10487. [PMID: 31210191 DOI: 10.1039/c9dt01368g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Recently, aminohydroximate ligands have found wide applications in the fascinating class of polynuclear metallamacrocyclic compounds named 15-MC-5 metallacrowns. The enhanced interest in water-soluble aminohydroximate Ln(iii)-Cu(ii) complexes is largely due to their rich coordination chemistry, diverse properties and ease of synthesis. We examined glycinehydroxamic acid as a simple ligand for the preparation of the first water-soluble polynuclear metallamacrocyclic Sr(ii)-Cu(ii) compound. The complex Sr(H2O)3[15-MCCuGlyha-5](Cl)2 was synthesized and characterized structurally and spectroscopically. The single-crystal structure reveals the classic metallamacrocyclic 15-MC-5 configuration. The Sr(ii) ion is located at the center of the 15-MCCu(II)Glyha-5 ring and coordinated by five oxygen atoms of the cycle in the equatorial plane and an additional three oxygen atoms of the water molecules at apical positions. Detailed DFT and QT AIM studies were carried out for the hydrated isoelectronic Sr[15-MCCuGlyha-5]2+ and Y[15-MCCuGlyha-5]3+ systems. The ionic contribution to the metal-ligand interactions appears to be higher for the Sr(ii) derivative despite the smaller charge separation. DFT calculations suggest a thermodynamically favorable substitution of the Sr(ii) central ion with Y(iii). Indeed, it was shown experimentally that the strontium ion can be easily replaced by yttrium. Preliminary cytotoxic studies revealed the low toxicity of the strontium complex and its yttrium analogue, so the water-soluble Sr(ii) and Y(iii) metallacrowns can be further investigated as possible platforms for the development of new 90Sr and 90Y radiotherapy drugs.
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Affiliation(s)
- Marina A Katkova
- G.A. Razuvaev Institute of Organometallic Chemistry RAS, 49 Tropinina St., 603950 Nizhny Novgorod, Russian Federation.
| | - Galina S Zabrodina
- G.A. Razuvaev Institute of Organometallic Chemistry RAS, 49 Tropinina St., 603950 Nizhny Novgorod, Russian Federation.
| | - Grigory Yu Zhigulin
- G.A. Razuvaev Institute of Organometallic Chemistry RAS, 49 Tropinina St., 603950 Nizhny Novgorod, Russian Federation.
| | - Evgeny V Baranov
- G.A. Razuvaev Institute of Organometallic Chemistry RAS, 49 Tropinina St., 603950 Nizhny Novgorod, Russian Federation.
| | - Maria M Trigub
- Institute of Problems of Chemical Physics RAS, 142432 Chernogolovka, Russian Federation
| | - Alexey A Terentiev
- Institute of Problems of Chemical Physics RAS, 142432 Chernogolovka, Russian Federation
| | - Sergey Yu Ketkov
- G.A. Razuvaev Institute of Organometallic Chemistry RAS, 49 Tropinina St., 603950 Nizhny Novgorod, Russian Federation.
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Woźniczka M, Świątek M, Pająk M, Gądek-Sobczyńska J, Chmiela M, Gonciarz W, Lisiecki P, Pasternak B, Kufelnicki A. Complexes in aqueous cobalt(II)-2-picolinehydroxamic acid system: Formation equilibria, DNA-binding ability, antimicrobial and cytotoxic properties. J Inorg Biochem 2018; 187:62-72. [PMID: 30055397 DOI: 10.1016/j.jinorgbio.2018.07.010] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 06/20/2018] [Accepted: 07/19/2018] [Indexed: 11/24/2022]
Abstract
The coordination properties of 2-picolinehydroxamic acid towards cobalt(II) in aqueous solution were determined by a pH-metric method and confirmed by spectroscopic (UV-Vis and ESI-MS) studies. The results show the formation of mononuclear complexes, as well as of metallacrowns (MC). All methods indicate a high tendency of 2-picolinehydroxamic acid to form cobalt(II) metallacrown 12-MC-4. ESI-MS additionally confirms 15-MC-5 and 18-MC-6, stabilized by a sodium ion and methanol. The complexes observed in the speciation model at a pH about 7.2 were studied for their DNA-binding ability. The decrease of absorbance in the range of ca 310-400 nm indicates effective binding to calf thymus DNA by 2-picolinehydroxamic acid complexes, via intercalative mode. The antimicrobial properties of 2-picolinehydroxamic acid, cobalt(II) ions and of the complexes formed in the Co(II) - ligand system were determined against Gram-positive bacteria (Enterococcus faecalis, Enterococcus faecium, Staphylococcus aureus, Bacillus subtilis), Gram-negative bacteria (Pseudomonas aeruginosa, Escherichia coli, Helicobacter pylori) and fungal strains (Candida, Aspergillus niger). The results indicate that the complexes demonstrate greater antibacterial and antifungal activity for most strains than the ligand. Both the complexes and the ligand induce a slight decrease in the metabolic activity of cells, while the complexes do not damage the cell nuclei. The 2-picolinehydroxamic acid complexes activate the human monocytic cells, suggesting they have immunomodulating properties, which are particularly important in combating infections caused by strains resistant to other drugs.
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Affiliation(s)
- Magdalena Woźniczka
- Department of Physical and Biocoordination Chemistry, Faculty of Pharmacy, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland.
| | - Mirosława Świątek
- Department of Physical and Biocoordination Chemistry, Faculty of Pharmacy, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland
| | - Marek Pająk
- Department of Physical and Biocoordination Chemistry, Faculty of Pharmacy, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland
| | - Joanna Gądek-Sobczyńska
- Department of Physical and Biocoordination Chemistry, Faculty of Pharmacy, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland
| | - Magdalena Chmiela
- Department of Immunology and Infectious Biology, Institute of Microbiology, Biotechnology and Immunology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland
| | - Weronika Gonciarz
- Department of Immunology and Infectious Biology, Institute of Microbiology, Biotechnology and Immunology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland
| | - Paweł Lisiecki
- Department of Pharmaceutical Microbiology and Microbiological Diagnostics, Medical University of Lodz, Pomorska 137, 90-235 Lodz, Poland
| | - Beata Pasternak
- Department of Organic Chemistry, Faculty of Chemistry, University of Lodz, Tamka 12, 91-403 Lodz, Poland
| | - Aleksander Kufelnicki
- Department of Physical and Biocoordination Chemistry, Faculty of Pharmacy, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland
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Safyanova IS, Ohui KA, Omelchenko IV, Shyshkina SV. Crystal structure of N-hy-droxy-quinoline-2-carboxamide monohydrate. Acta Crystallogr E Crystallogr Commun 2017; 73:795-797. [PMID: 28529801 PMCID: PMC5418809 DOI: 10.1107/s2056989017005618] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2017] [Accepted: 04/13/2017] [Indexed: 11/16/2022]
Abstract
The title compound, C10H8N2O2·H2O, consists of an N-hy-droxy-quinoline-2-carboxamide mol-ecule in the keto tautomeric form and a water mol-ecule connected through an O-H⋯O hydrogen bond. The N-hy-droxy-quinoline-2-carboxamide mol-ecule has a nearly planar structure [maximum deviation = 0.062 (1) Å] and only the hy-droxy H atom deviates significantly from the mol-ecule plane. In the crystal, π-π stacking between the aromatic rings [inter-centroid distance = 3.887 (1) Å] and inter-molecular O-H⋯O hydrogen bonds organize the crystal components into columns extending along the b-axis direction.
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Affiliation(s)
- Inna S. Safyanova
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Kateryna A. Ohui
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Iryna V. Omelchenko
- SSI ‘Institute for Single Crystals’, National Academy of Sciences of Ukraine, 60 Nauki Ave., Kharkiv 61001, Ukraine
| | - Svitlana V. Shyshkina
- SSI ‘Institute for Single Crystals’, National Academy of Sciences of Ukraine, 60 Nauki Ave., Kharkiv 61001, Ukraine
- V.N. Karazin Kharkiv National University, Department of Inorganic Chemistry, 4, Svobody Sq., Kharkiv 61001, Ukraine
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Safyanova IS, Ohui KA, Omelchenko IV. Crystal structure of bis-(μ- N-hy-droxy-picolin-amid-ato)bis-[bis-( N-hy-droxy-picolinamide)-sodium]. Acta Crystallogr E Crystallogr Commun 2017; 73:24-27. [PMID: 28083127 PMCID: PMC5209763 DOI: 10.1107/s2056989016019095] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2016] [Accepted: 11/30/2016] [Indexed: 11/23/2022]
Abstract
The title compound, [Na2(C6H5N2O2)2(C6H6N2O2)4], is a centrosymmetric coordination dimer based on the sodium(I) salt of N-hy-droxy-picolinamide. The mol-ecule has an {Na2O6(μ-O)2} core with two bridging carbonyl O atoms and two hydroxamate O atoms of two mono-deprotonated residues of N-hy-droxy-picolinamide, while two neutral N-hy-droxy-picolinamide mol-ecules are coordinated in a monodentate manner to each sodium ion via the carbonyl O atoms [the Na-O distances range from 2.3044 (2) to 2.3716 (2) Å]. The penta-coordinated sodium ion exhibits a distorted trigonal-pyramidal coordination polyhedron. In the crystal, the coordination dimers are linked into chains along the c axis via N-H⋯O and N-H⋯N hydrogen bonds; the chains are linked into a two-dimensional framework parallel to (100) via weak C-H⋯O and π-π stacking inter-actions.
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Affiliation(s)
- Inna S. Safyanova
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Kateryna A. Ohui
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Irina V. Omelchenko
- SSI "Institute for Single Crystals", National Academy of Sciences of Ukraine, Nauki ave. 60, Kharkiv, 61001, Ukraine
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Odarich IA, Pavlishchuk AV, Kalibabchuk VA, Haukka M. Crystal structure of μ-oxalodi-hydroxamato-bis-[(2,2'-bipyrid-yl)(di-methyl sulfoxide-κO)copper(II)] bis-(perchlorate). Acta Crystallogr E Crystallogr Commun 2016; 72:147-50. [PMID: 26958375 PMCID: PMC4770973 DOI: 10.1107/s2056989016000050] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2015] [Accepted: 01/02/2016] [Indexed: 12/04/2022]
Abstract
The centrosymmetric binuclear complex, [Cu2(C2H2N2O4)(C10H8N2)2(C2H6OS)2](ClO4)2, contains two copper(II) ions, connected through an N-deprotonated oxalodi-hydroxamic acid dianion, two terminal 2,2'-bi-pyridine ligands, and two apically coordinating dimethylsulfoxide mol-ecules. Two non-coordinating perchlorate anions assure electrical neutrality. The copper(II) ions in the complex dication [Cu2(C10H8N2)2(μ-C2H2N2O4)(C2H6SO)2](2+) are in an O2N3 square-pyramidal donor environment, the Cu-Cu separation being 5.2949 (4) Å. Two hydroxamate groups in the deprotonated oxalodi-hydroxamic acid are located trans to one each other. In the crystal, O-H⋯O and C-H⋯O hydrogen bonds link the complex cations to the perchlorate anions. Further C-H⋯O hydrogen bonds combine with π-π contacts with a centroid-to-centroid separation of 3.6371 (12) Å to stack the mol-ecules along the a-axis direction.
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Affiliation(s)
- Irina A. Odarich
- O.O. Bohomolets National Medical University, Department of General Chemistry, Pr. Pobedy, 34, Kiev, 03055 , Ukraine
| | - Anna V. Pavlishchuk
- Taras Shevchenko National University of Kiev, Department of Chemistry, Volodymyrska str. 62, Kiev, 01601 , Ukraine
| | - Valentina A. Kalibabchuk
- O.O. Bohomolets National Medical University, Department of General Chemistry, Pr. Pobedy, 34, Kiev, 03055 , Ukraine
| | - Matti Haukka
- University of Joensuu, Department of Chemistry, PO Box 111, FI-80101 Joensuu, Finland
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Safyanova IS, Ohui KA, Omelchenko IV. Crystal structure of N-hy-droxy-picolinamide monohydrate. Acta Crystallogr E Crystallogr Commun 2016; 72:117-9. [PMID: 26958367 PMCID: PMC4770983 DOI: 10.1107/s2056989015024706] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Accepted: 12/23/2015] [Indexed: 11/10/2022]
Abstract
The crystal structure of the title compound, C6H6N2O2·H2O, consists of N-hy-droxy-picolinamide and water mol-ecules connected through O-H⋯O and N-H⋯N hydrogen bonds. The O-H⋯O inter-actions and π-π stacking inter-actions between the pyridine rings [centroid-centroid distance = 3.427 (1) Å] organize the components into columns extending along the b axis and the N-H⋯N hydrogen bonds link these columns into a two-dimensional framework parallel to (100). The N-hy-droxy-picolinamide mol-ecule adopts a strongly flattened conformation and only the O-H group H atom deviates significantly from the mol-ecule best plane. The dihedral angle between the hydroxamic group and the pyridine ring is 5.6 (2)°. The conformation about the hydroxamic group C-N bond is Z and that about the C-C bond between the pyridine and hydroxamic groups is E.
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Affiliation(s)
- Inna S. Safyanova
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Kateryna A. Ohui
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, 01601 Kiev, Ukraine
| | - Irina V. Omelchenko
- SSI "Institute for Single Crystals", National Academy of Sciences of Ukraine, Lenina ave. 60, Kharkiv 61001, Ukraine
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