Rigidity of the heme pocket in the cooperative Scapharca hemoglobin homodimer and relation to the direct communication between hemes

Photoactivation studies of zinc porphyrin-myoglobin system and its application for light-chemical energy conversion

An artificial zinc porphyrin-myoglobin-based photo-chemical energy conversion system, consisting of ZnPP-Mb or ZnPE₁-Mb as a photosensitizer, NADP⁺ as an electron acceptor, and triethanolamine as an electron donor, has been constructed to mimic photosystem I. The photoirradiated product is able to reduce a single-electron acceptor protein cytochrome c, but cannot catalyze the two-electron reduction of acetaldehyde by alcohol dehydrogenase, thus demonstrating a single electron transfer mechanism. Furthermore, the artificial system can bifunctionally promote oxidoredox reactions, depending on the presence or absence of a sacrificial electron donor, thus suggesting its potential application in electrochemical regeneration steps involved in chemical transformation and/or energy conversion.

Ultrafast relaxation of zinc protoporphyrin encapsulated within apomyoglobin in buffer solutions

The relaxation dynamics of a zinc protoporphyrin (ZnPP) in THF, KPi buffer, and encapsulated within apomyoglobin (apoMb) was investigated in its excited state using femtosecond fluorescence up-conversion spectroscopy with S2 excitation (lambda(ex) = 430 nm). The S2 --> S1 internal conversion of ZnPP is ultrafast (tau < 100 fs), and the hot S1 ZnPP species are produced promptly after excitation. The relaxation dynamics of ZnPP in THF solution showed a dominant offset component (tau = 2.0 ns), but it disappeared completely when ZnPP formed aggregates in KPi buffer solution. When ZnPP was reconstituted into the heme pocket of apoMb to form a complex in KPi buffer solution, the fluorescence transients exhibited a biphasic decay feature with the signal approaching an asymptotic offset: at lambda(em) = 600 nm, the rapid component decayed in 710 fs and the slow one in 27 ps; at lambda(em) = 680 nm, the two time constants were 950 fs and 40 ps. We conclude that (1) the fast-decay component pertains to an efficient transfer of energy from the hot S1 ZnPP species to apoMb through a dative bond between zinc and proximal histidine of the protein; (2) the slow-decay component arises from the water-induced vibrational relaxation of the hot S1 ZnPP species; and (3) the offset component is due to S1 --> T1 intersystem crossing of the surviving cold S1 ZnPP species. The transfer of energy through bonds might lead the dative bond to break, which explains our observation of the degradation of ZnPP-Mb samples in UV-vis and CD spectra upon protracted excitation.

Dynamic properties of monomeric insect erythrocruorin III from Chironomus thummi-thummi: relationships between structural flexibility and functional complexity

We have investigated the kinetics of geminate carbon monoxide binding to the monomeric component III of Chironomus thummi-thummi erythrocruorin, a protein that undergoes pH-induced conformational changes linked to a pronounced Bohr effect. Measurements were performed from cryogenic temperatures to room temperature in 75% glycerol and either 0.1 M potassium phosphate (pH 7) or 0.1 potassium borate (pH 9) after nanosecond laser photolysis. The distributions of the low temperature activation enthalpy g(H) for geminate ligand binding derived from the kinetic traces are quite narrow and are influenced by temperature both below and above approximately 170 K, the glass transition temperature. The thermal evolution of the CO binding kinetics between approximately 50 K and approximately 170 K indicates the presence of some degree of structural relaxation, even in this temperature range. Above approximately 220 K the width of the g(H) progressively decreases, and at 280 K geminate CO binding becomes exponential in time. Based on a comparison with analogous investigations of the homodimeric hemoglobin from Scapharca inaequivalvis, we propose a link between dynamic properties and functional complexity.

Effect of the vinyl-globin interactions on the temperature-dependent broadening of the Soret spectra: a study with horse myoglobin and Scapharca dimeric hemoglobin reconstituted with unnatural 2,4-heme derivatives

The temperature dependence of the Soret absorption spectra has been measured over the range 80 to 300 K on deoxygenated and carbonmonoxy horse heart myoglobin and Scapharca inaequivalvis dimeric hemoglobin reconstituted with proto- or with meso- and deutero-heme, in which the vinyl groups have been replaced with ethyl groups or hydrogen atoms, respectively. In the meso- and deutero-derivatives of both proteins the linewidth of the absorption spectra is narrower and less sensitive to thermal broadening effects than in the proto-derivatives. Moreover, the broadening effects are larger in the deoxygenated proteins with respect to the liganded adducts. The quantitative analysis of these effects shows that the change in linewidth is due to a marked decrease in the extent of coupling between the heme vibronic transitions and the protein low-frequency motions. The relevance of the vinyl groups in the dynamics of the heme-globin interaction is highlighted by this experimental approach which shows that the protein is capable of transmitting structural information to the heme by coupling the ensemble of the low-frequency modes to the stereochemistry of the vinyl itself. This mechanism, which entails adjustment of the equilibrium between vinyl torsional conformers, represents an additional pathway for the control of the heme reactivity in addition to the iron-histidine link.