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Hosseini S, Sharifi R, Habibi A. Simultaneous removal of aliphatic and aromatic crude oil hydrocarbons by Pantoea agglomerans isolated from petroleum-contaminated soil in the west of Iran. Arch Microbiol 2024; 206:98. [PMID: 38351169 DOI: 10.1007/s00203-023-03819-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/25/2023] [Accepted: 12/26/2023] [Indexed: 02/16/2024]
Abstract
Hydrocarbons are considered as one of the most common and harmful environmental pollutants affecting human health and the environment. Bioremediation as an environmentally friendly, highly efficient, and cost-effective method in remediating oil-contaminated environments has been interesting in recent decades. In this study, hydrocarbon degrader bacterial strains were isolated from the highly petroleum-contaminated soils in the Dehloran oil field in the west of Iran. Out of 37 isolates, 15 can grow on M9 agar medium that contains 1.5 g L-1 of crude oil as the sole carbon source. The morphological, biochemical, and 16SrRNA sequencing analyses were performed for the isolates. The choosing of the isolates as the hydrocarbon degrader was examined by evaluating the efficacy of their crude oil removal at a concentration of 10 g L-1 in an aqueous medium. The results showed that five isolates belonging to Pseudomonas sp., Pseudomonas oryzihabitans, Roseomonas aestuarii, Pantoea agglomerans, and Arthrobacter sp. had a hyper hydrocarbon-degrading activity and they could remove more than 85% of the total petroleum hydrocarbon (TPH) after 96 h. The highest TPH removal of about 95.75% and biodegradation rate of 0.0997 g L-1 h-1 was observed for P. agglomerans. The gas chromatography-mass spectroscopy (GC-MS) analysis was performed during the biodegradation process by P. agglomerans to detect the degradation intermediates and final products. The results confirmed the presence of intermediates such as alcohols and fatty acids in the terminal oxidation pathway of alkanes in this biodegradation process. A promising P. agglomerans NB391 strain can remove aliphatic and aromatic hydrocarbons simultaneously.
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Affiliation(s)
- Saman Hosseini
- Department of Plant Protection, Razi University, Kermanshah, Iran
| | | | - Alireza Habibi
- Faculty of Petroleum and Chemical Engineering, Razi University, Kermanshah, Iran
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He J, Chen Y, Dai L, Yao J, Mei Y, Hrynsphan D, Tatsiana S, Chen J. Rapid and Complete Biodegradation of Acrylic Acid by a Novel Strain Rhodococcus ruber JJ-3: Kinetics, Carbon Balance, and Degradation Pathways. BIOTECHNOL BIOPROC E 2020. [DOI: 10.1007/s12257-019-0465-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Cheng M, Zeng G, Huang D, Yang C, Lai C, Zhang C, Liu Y. Tween 80 surfactant-enhanced bioremediation: toward a solution to the soil contamination by hydrophobic organic compounds. Crit Rev Biotechnol 2017; 38:17-30. [PMID: 28423946 DOI: 10.1080/07388551.2017.1311296] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The occurrence of hydrophobic organic compounds (HOCs) in the soil has become a highly significant environmental issue. This problem has been exacerbated by the strong sorption of HOCs to the soils, which makes them unavailable for most remediation processes. More and more works show that surfactant-enhanced biological technologies offer a great potential to clear up HOCs-contaminated soils. This article is a critical review of HOCs removal from soils using Tween 80 (one of the mostly used nonionic surfactants) aided biological remediation technologies. The review begins with a discussion of the fundamentals of Tween 80-enhanced desorption of HOCs from contaminated soils, with special emphasis on the biotoxicity of Tween 80. Successful results obtained by Tween 80-enhanced microbial degradation and phytoremediation are documented and discussed in section 3 and section 4, respectively. Results show Tween 80-enhanced biotechnologies are promising for treating HOCs-contaminated soils. However, considering the fact that most of these scientific studies have only been conducted at the laboratory-scale, many improvements are required before these technologies can be scaled up to the full-scale level. Moreover, further research on mechanisms related to the interaction of Tween 80 with degrading microorganisms and the plants is in high demand.
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Affiliation(s)
- Min Cheng
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Guangming Zeng
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Danlian Huang
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Chunping Yang
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Cui Lai
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Chen Zhang
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
| | - Yang Liu
- a Department of Environmental Engineering, College of Environmental Science and Engineering , Hunan University , Changsha , Hunan , China.,b Department of Environmental Engineering , Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education , Changsha , Hunan , China
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Biodegradative Activities of Selected Environmental Fungi on a Polyester Polyurethane Varnish and Polyether Polyurethane Foams. Appl Environ Microbiol 2016; 82:5225-35. [PMID: 27316963 DOI: 10.1128/aem.01344-16] [Citation(s) in RCA: 89] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Accepted: 06/10/2016] [Indexed: 11/20/2022] Open
Abstract
UNLABELLED Polyurethane (PU) is widely used in many aspects of modern life because of its versatility and resistance. However, PU waste disposal generates large problems, since it is slowly degraded, there are limited recycling processes, and its destruction may generate toxic compounds. In this work, we isolated fungal strains able to grow in mineral medium with a polyester PU (PS-PU; Impranil DLN) or a polyether PU (PE-PU; Poly Lack) varnish as the only carbon source. Of the eight best Impranil-degrading strains, the six best degraders belonged to the Cladosporium cladosporioides complex, including the species C. pseudocladosporioides, C. tenuissimum, C. asperulatum, and C. montecillanum, and the two others were identified as Aspergillus fumigatus and Penicillium chrysogenum The best Impranil degrader, C. pseudocladosporioides strain T1.PL.1, degraded up to 87% after 14 days of incubation. Fourier transform infrared (FTIR) spectroscopy analysis of Impranil degradation by this strain showed a loss of carbonyl groups (1,729 cm(-1)) and N-H bonds (1,540 and 1,261 cm(-1)), and gas chromatography-mass spectrometry (GC-MS) analysis showed a decrease in ester compounds and increase in alcohols and hexane diisocyanate, indicating the hydrolysis of ester and urethane bonds. Extracellular esterase and low urease, but not protease activities were detected at 7 and 14 days of culture in Impranil. The best eight Impranil-degrading fungi were also able to degrade solid foams of the highly recalcitrant PE-PU type to different extents, with the highest levels generating up to 65% of dry-weight losses not previously reported. Scanning electron microscopy (SEM) analysis of fungus-treated foams showed melted and thinner cell wall structures than the non-fungus-treated ones, demonstrating fungal biodegradative action on PE-PU. IMPORTANCE Polyurethane waste disposal has become a serious problem. In this work, fungal strains able to efficiently degrade different types of polyurethanes are reported, and their biodegradative activity was studied by different experimental approaches. Varnish biodegradation analyses showed that fungi were able to break down the polymer in some of their precursors, offering the possibility that they may be recovered and used for new polyurethane synthesis. Also, the levels of degradation of solid polyether polyurethane foams reported in this work have never been observed previously. Isolation of efficient polyurethane-degrading microorganisms and delving into the mechanisms they used to degrade the polymer provide the basis for the development of biotechnological processes for polyurethane biodegradation and recycling.
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Adrion AC, Nakamura J, Shea D, Aitken MD. Screening Nonionic Surfactants for Enhanced Biodegradation of Polycyclic Aromatic Hydrocarbons Remaining in Soil After Conventional Biological Treatment. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016; 50:3838-45. [PMID: 26919662 PMCID: PMC4973855 DOI: 10.1021/acs.est.5b05243] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
A total of five nonionic surfactants (Brij 30, Span 20, Ecosurf EH-3, polyoxyethylene sorbitol hexaoleate, and R-95 rhamnolipid) were evaluated for their ability to enhance PAH desorption and biodegradation in contaminated soil after treatment in an aerobic bioreactor. Surfactant doses corresponded to aqueous-phase concentrations below the critical micelle concentration in the soil-slurry system. The effect of surfactant amendment on soil (geno)toxicity was also evaluated for Brij 30, Span 20, and POESH using the DT40 B-lymphocyte cell line and two of its DNA-repair-deficient mutants. Compared to the results from no-surfactant controls, incubation of the bioreactor-treated soil with all surfactants increased PAH desorption, and all except R-95 substantially increased PAH biodegradation. POESH had the greatest effect, removing 50% of total measured PAHs. Brij 30, Span 20, and POESH were particularly effective at enhancing biodegradation of four- and five-ring PAHs, including five of the seven carcinogenic PAHs, with removals up to 80%. Surfactant amendment also significantly enhanced the removal of alkyl-PAHs. Most treatments significantly increased soil toxicity. Only the no-surfactant control and Brij 30 at the optimum dose significantly decreased soil genotoxicity, as evaluated with either mutant cell line. Overall, these findings have implications for the feasibility of bioremediation to achieve cleanup levels for PAHs in soil.
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Affiliation(s)
- Alden C. Adrion
- Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7431
| | - Jun Nakamura
- Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7431
| | - Damian Shea
- Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina
| | - Michael D. Aitken
- Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7431
- Corresponding author (T: 1-919-966-1024; F: 1-919-966-7911; )
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Santos R, de Carvalho CCCR, Stevenson A, Grant IR, Hallsworth JE. Extraordinary solute-stress tolerance contributes to the environmental tenacity of mycobacteria. ENVIRONMENTAL MICROBIOLOGY REPORTS 2015; 7:746-764. [PMID: 26059202 DOI: 10.1111/1758-2229.12306] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2014] [Accepted: 05/29/2015] [Indexed: 06/04/2023]
Abstract
Mycobacteria are associated with a number of well-characterized diseases, yet we know little about their stress biology in natural ecosystems. This study focuses on the isolation and characterization of strains from Yellowstone National Park (YNP) and Glacier National Park (GNP; USA), the majority of those identified were Mycobacterium parascrofulaceum, Mycobacterium avium (YNP) or Mycobacterium gordonae (GNP). Generally, their windows for growth spanned a temperature range of > 60 °C; selected isolates grew at super-saturated concentrations of hydrophobic stressors and at levels of osmotic stress and chaotropic activity (up to 13.4 kJ kg(-1) ) similar to, or exceeding, those for the xerophilic fungus Aspergillus wentii and solvent-tolerant bacterium Pseudomonas putida. For example, mycobacteria grew down to 0.800 water activity indicating that they are, with the sole exception of halophiles, more xerotolerant than other bacteria (or any Archaea). Furthermore, the fatty-acid composition of Mycobacterium cells grown over a range of salt concentrations changed less than that of other bacteria, indicating a high level of resilience, regardless of the stress load. Cells of M. parascrofulaceum, M. smegmatis and M. avium resisted the acute, potentially lethal challenges from extremes of pH (< 1; > 13), and saturated MgCl2 solutions (5 M; 212 kJ kg(-1) chaotropicity). Collectively, these findings challenge the paradigm that bacteria have solute tolerances inferior to those of eukaryotes.
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Affiliation(s)
- Ricardo Santos
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Medical Biology Centre, Belfast, BT9 7BL, Northern Ireland
- Instituto Superior Técnico, Laboratório de Análises, Lisbon, 1049-001, Portugal
| | - Carla C C R de Carvalho
- iBB-Institute for Bioengineering and Biosciences, Department of Bioengineering, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, Lisbon, 1049-001, Portugal
| | - Andrew Stevenson
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Medical Biology Centre, Belfast, BT9 7BL, Northern Ireland
| | - Irene R Grant
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Medical Biology Centre, Belfast, BT9 7BL, Northern Ireland
| | - John E Hallsworth
- Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Medical Biology Centre, Belfast, BT9 7BL, Northern Ireland
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