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Wang Y, Yao Y, Zhang Y, Qian X, Guo D, Coates BS. A chromosome-level genome assembly of the soybean pod borer: insights into larval transcriptional response to transgenic soybean expressing the pesticidal Cry1Ac protein. BMC Genomics 2024; 25:355. [PMID: 38594617 PMCID: PMC11005160 DOI: 10.1186/s12864-024-10216-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 03/12/2024] [Indexed: 04/11/2024] Open
Abstract
BACKGROUND Genetically modified (GM) crop plants with transgenic expression of Bacillus thuringiensis (Bt) pesticidal proteins are used to manage feeding damage by pest insects. The durability of this technology is threatened by the selection for resistance in pest populations. The molecular mechanism(s) involved in insect physiological response or evolution of resistance to Bt is not fully understood. RESULTS To investigate the response of a susceptible target insect to Bt, the soybean pod borer, Leguminivora glycinivorella (Lepidoptera: Tortricidae), was exposed to soybean, Glycine max, expressing Cry1Ac pesticidal protein or the non-transgenic parental cultivar. Assessment of larval changes in gene expression was facilitated by a third-generation sequenced and scaffolded chromosome-level assembly of the L. glycinivorella genome (657.4 Mb; 27 autosomes + Z chromosome), and subsequent structural annotation of 18,197 RefSeq gene models encoding 23,735 putative mRNA transcripts. Exposure of L. glycinivorella larvae to transgenic Cry1Ac G. max resulted in prediction of significant differential gene expression for 204 gene models (64 up- and 140 down-regulated) and differential splicing among isoforms for 10 genes compared to unexposed cohorts. Differentially expressed genes (DEGs) included putative peritrophic membrane constituents, orthologs of Bt receptor-encoding genes previously linked or associated with Bt resistance, and those involved in stress responses. Putative functional Gene Ontology (GO) annotations assigned to DEGs were significantly enriched for 36 categories at GO level 2, respectively. Most significantly enriched cellular component (CC), biological process (BP), and molecular function (MF) categories corresponded to vacuolar and microbody, transport and metabolic processes, and binding and reductase activities. The DEGs in enriched GO categories were biased for those that were down-regulated (≥ 0.783), with only MF categories GTPase and iron binding activities were bias for up-regulation genes. CONCLUSIONS This study provides insights into pathways and processes involved larval response to Bt intoxication, which may inform future unbiased investigations into mechanisms of resistance that show no evidence of alteration in midgut receptors.
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Affiliation(s)
- Yangzhou Wang
- Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Yao Yao
- Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Yunyue Zhang
- Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Xueyan Qian
- Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Dongquan Guo
- Jilin Academy of Agricultural Sciences, Changchun, 130033, China.
| | - Brad S Coates
- United States Department of Agriculture, Agricultural Research Service, Corn Insects & Crop Genetics Research Unit, 532 Science II, 2310 Pammel Dr., Ames, IA, 50011, USA.
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Zhao W, Poncet-Legrand C, Staunton S, Quiquampoix H. pH-Dependent Changes in Structural Stabilities of Bt Cry1Ac Toxin and Contrasting Model Proteins following Adsorption on Montmorillonite. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:5693-5702. [PMID: 36989144 DOI: 10.1021/acs.est.2c09310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
The environmental fate of insecticidal Cry proteins, including time-dependent conservation of biological properties, results from their structural stability in soils. The complex cascade of reactions involved in biological action requires Cry proteins to be in solution. However, the pH-dependent changes in conformational stability and the adsorption-desorption mechanisms of Cry protein on soil minerals remain unclear. We used Derjaguin-Landau-Verwey-Overbeek (DLVO) calculation and differential scanning calorimetry to interpret the driving forces and structural stabilities of Cry1Ac and two contrasting model proteins adsorbed by montmorillonite. The structural stability of Cry1Ac is closer to that of the "hard" protein, α-chymotrypsin, than that of the "soft" bovine serum albumin (BSA). The pH-dependent adsorption of Cry1Ac and α-chymotrypsin could be explained by DLVO theory, whereas the BSA adsorption deviated from it. Patch-controlled electrostatic attraction, hydrophobic effects, and entropy changes following protein unfolding on a mineral surface could contribute to Cry1Ac adsorption. Cry1Ac, like chymotrypsin, was partly denatured on montmorillonite, and its structural stability decreased with an increase in pH. Moreover, small changes in the conformational heterogeneity of both Cry1Ac and chymotrypsin were observed following adsorption. Conversely, adsorbed BSA was completely denatured regardless of the solution pH. The moderate conformational rearrangement of adsorbed Cry1Ac may partially explain why the insecticidal activity of Bt toxin appears to be conserved in soils, albeit for a relatively short time period.
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Affiliation(s)
- Wenqiang Zhao
- Eco&Sols, INRAE, IRD, Cirad, Institut Agro, Univ Montpellier, 34090 Montpellier, France
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China
| | | | - Siobhan Staunton
- Eco&Sols, INRAE, IRD, Cirad, Institut Agro, Univ Montpellier, 34090 Montpellier, France
| | - Hervé Quiquampoix
- Eco&Sols, INRAE, IRD, Cirad, Institut Agro, Univ Montpellier, 34090 Montpellier, France
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Salamun, Fatimah, Fauzi A, Praduwana SN, Ni'matuzahroh. Larvicidal toxicity and parasporal inclusion of native Bacillus thuringiensis BK5.2 against Aedes aegypti. J Basic Clin Physiol Pharmacol 2021; 32:379-384. [PMID: 34214353 DOI: 10.1515/jbcpp-2020-0472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2020] [Accepted: 02/21/2021] [Indexed: 11/15/2022]
Abstract
OBJECTIVES Native Bacillus thuringiensis BK5.2, isolated from soil of Baluran National Park, East Java, Indonesia, has been shown to be toxic against Aedes aegypti larvae. This study aims to determine the strength and the speed of the toxicity of B. thuringiensis BK5.2 against A. aegypti larvae in lethal concentration (LC) and lethal time (LT), as well as detection of toxin structure and parasporal inclusion. METHODS LC values were determined by the mortality of A. aegypti third instar larvae after 24 and 48 h exposure to five various concentrations of B. thuringiensis BK5.2, while LT values were determined based on the mortality of A. aegypti third instar larvae due to exposure to LC90 concentration at 0; 0.5; 1; 2; 4; 8; 10; 20; 24; and 48 h. Larvicidal toxicity was determined based on value of LC50 and LC90 (CFU/mL), as well as LT50 and LT90 (hours) analysed with Probit analysis. Parasporal inclusion was detected using transmission electron microscope (TEM) and scanning electron microscope (SEM). RESULTS Based on bioassay, LC50 and LC90 values were 11.6 × 106 and 22.7 × 106 CFU/mL, respectively, at 24 h exposure, as well as 8.3 × 106 and 15.4 × 106 CFU/mL, respectively, at 48 h exposure, while the value of LT50 and LT90 were 19.0 and 26.6 h, respectively. Morphological observation of the dead larvae showed there was damage on abdomen and thorax region. Detection by TEM and SEM showed there was cuboidal parasporal inclusion. CONCLUSIONS Native B. thuringiensis BK5.2 has high toxicity against A. aegypti larvae and detected flatcuboidal toxin in parasporal inclusion.
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Affiliation(s)
- Salamun
- Faculty of Science and Technology, University -CoE- Research Center for Bio-Molecule Engineering, Universitas Airlangga, Surabaya, Indonesia
| | - Fatimah
- Faculty of Science and Technology, University -CoE- Research Center for Bio-Molecule Engineering, Universitas Airlangga, Surabaya, Indonesia
| | - Ahmad Fauzi
- Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia
| | - Seling N Praduwana
- Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia
| | - Ni'matuzahroh
- Faculty of Science and Technology, Faculty of Advanced Technology and Multidiscipline, University -CoE- Research Center for Bio-Molecule Engineering, Universitas Airlangga, Surabaya, Indonesia
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Álvarez-Alfageme F, Devos Y, Camargo AM, Arpaia S, Messéan A. Managing resistance evolution to transgenic Bt maize in corn borers in Spain. Crit Rev Biotechnol 2021; 42:201-219. [PMID: 34154477 DOI: 10.1080/07388551.2021.1931018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Since 1998, genetically engineered Bt maize varieties expressing the insecticidal Cry1Ab protein (i.e. event MON 810) have been grown in the European Union (EU), mainly in Spain. These varieties confer resistance against the European and Mediterranean corn borer (ECB and MCB), which are the major lepidopteran maize pests in the EU, particularly in Mediterranean areas. However, widespread, repeated and exclusive use of Bt maize is anticipated to increase the risk of Cry1Ab resistance to evolve in corn borer populations. To delay resistance evolution, typically, refuges of non-Bt maize are planted near or adjacent to, or within Bt maize fields. Moreover, changes in Cry1Ab susceptibility in field populations of corn borers and unexpected damage to maize MON 810, due to corn borers, are monitored on an annual basis. After two decades of Bt maize cultivation in Spain, neither resistant corn borer populations nor farmer complaints on unexpected field damage have been reported. However, whether the resistance monitoring strategy followed in Spain, currently based on discriminating concentration bioassays, is sufficiently sensitive to timely detect early warning signs of resistance in the field remains a point of contention. Moreover, the Cry1Ab resistance allele frequency to Bt maize, which has recently been estimated in MCB populations from north-eastern Spain, might exceed that recommended for successful resistance management. To ensure Bt maize durability in Spain, it is key that adequate resistance management approaches, including monitoring of resistance and farmer compliance with refuge requirements, continue to be implemented and are incorporated in integrated pest management schemes.
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Affiliation(s)
| | | | | | | | - Antoine Messéan
- INRAE, Eco-Innov, Université Paris-Saclay, Thiverval-Grignon, France
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Chauhan VK, Dhania NK, Lokya V, Bhuvanachandra B, Padmasree K, Dutta-Gupta A. Midgut aminopeptidase N expression profile in castor semilooper (Achaea janata) during sublethal Cry toxin exposure. J Biosci 2021. [DOI: 10.1007/s12038-021-00148-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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A novel anti-dipteran Bacillus thuringiensis strain: Unusual Cry toxin genes in a highly dynamic plasmid environment. Appl Environ Microbiol 2021; 87:AEM.02294-20. [PMID: 33310715 PMCID: PMC8090892 DOI: 10.1128/aem.02294-20] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Bacillus thuringiensis emerged as a major bioinsecticide on the global market. It offers a valuable alternative to chemical products classically utilized to control pest insects. Despite the efficiency of several strains and products available on the market, the scientific community is always on the lookout for novel toxins that can replace or supplement the existing products. In this study, H3, a novel B. thuringiensis strain showing mosquitocidal activity, was isolated from Lebanese soil and characterized at an in vivo, genomic and proteomic levels. H3 parasporal crystal is toxic on its own but displays an unusual killing profile with a higher LC50 than the reference B. thuringiensis serovar israelensis crystal proteins. In addition, H3 has a different toxicity order: it is more toxic to Aedes albopictus and Anopheles gambiae than to Culex pipiens Whole genome sequencing and crystal analysis revealed that H3 can produce eleven novel Cry proteins, eight of which are assembled in genes with an orf1-gap-orf2 organization, where orf2 is a potential Cry4-type crystallization domain. Moreover, pH3-180, the toxin-carrying plasmid, holds a wide repertoire of mobile genetic elements that amount to ca 22% of its size., including novel insertion sequences and class II transposable elements Two other large plasmids present in H3 carry genetic determinants for the production of many interesting molecules - such as chitinase, cellulase and bacitracin - that may add up to H3 bioactive properties. This study therefore reports a novel mosquitocidal Bacillus thuringiensis strain with unusual Cry toxin genes in a rich mobile DNA environment.IMPORTANCE Bacillus thuringiensis, a soil entomopathogenic bacteria, is at the base of many sustainable eco-friendly bio-insecticides. Hence stems the need to continually characterize insecticidal toxins. H3 is an anti-dipteran B. thuringiensis strain, isolated from Lebanese soil, whose parasporal crystal contains eleven novel Cry toxins and no Cyt toxins. In addition to its individual activity, H3 showed potential as a co-formulant with classic commercialized B. thuringiensis products, to delay the emergence of resistance and to shorten the time required for killing. On a genomic level, H3 holds three large plasmids, one of which carries the toxin-coding genes, with four occurrences of the distinct orf1-gap-orf2 organization. Moreover, this plasmid is extremely rich in mobile genetic elements, unlike its two co-residents. This highlights the important underlying evolutionary traits between toxin-carrying plasmids and the adaptation of a B. thuringiensis strain to its environment and insect host spectrum.
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Jamil S, Shahzad R, Rahman SU, Iqbal MZ, Yaseen M, Ahmad S, Fatima R. The level of Cry1Ac endotoxin and its efficacy against H. armigera in Bt cotton at large scale in Pakistan. GM CROPS & FOOD 2020; 12:1-17. [PMID: 32762312 PMCID: PMC7553749 DOI: 10.1080/21645698.2020.1799644] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
A biophysical survey was conducted in 15 cotton-growing districts of Pakistan. Four hundred cotton growers were approached and inquired about the production technology of Bt cotton. Further, 25 strip tests using combo strips (Cry1Ac, Cry2Ab, Vip3Aa and Cp4, EPSPS gene) were performed at each farmer’s field. Out of 10,000 total-tested samples, farmers claimed 9682 samples as Bt and 318 samples as non-Bt. After performing a strip test, 1009 and 87 samples were found false negative and false positive, respectively. Only 53 samples were found positive for Cry2Ab, 214 for EPSPS and none for Vip3Aa gene. Quantification of Cry endotoxin and bioassay studies were performed by taking leaves from upper, middle, and lower canopies, and fruiting parts at approximately 80 days after sowing from 89 varieties. Expression was highly variable among different canopies and fruiting parts. Moreover, Cry endotoxin expression and insect mortality varied significantly among varieties from 0.26 µg g−1 to 3.54 µg g−1 with mortality ranging from 28 to 97%, respectively. Highest Cry1Ac expression (3.54 µg g−1) and insect mortality (97%) were observed for variety FH-142 from DG Khan. Cry endotoxin expression varied significantly across various plant parts, i.e., IUB-13 variety from upper canopy documented 0.34 µg g−1 expression with 37% insect mortality in Layyah to 3.42 µg g−1 expression and 96% insect mortality from DG Khan. Lethal dose, LD95 (2.20 µg g−1) of Cry1Ac endotoxin was optimized for effective control of H. armigera. Our results provided evidence of practical resistance in H. armigera and way forward.
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Affiliation(s)
- Shakra Jamil
- Genetically Modified Organism Testing Lab, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute , Faisalabad, Pakistan
| | - Rahil Shahzad
- Genetically Modified Organism Testing Lab, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute , Faisalabad, Pakistan
| | - Sajid Ur Rahman
- Genetically Modified Organism Testing Lab, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute , Faisalabad, Pakistan
| | - Muhammad Zaffar Iqbal
- Genetically Modified Organism Testing Lab, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute , Faisalabad, Pakistan
| | - Muhammad Yaseen
- Department of Mathematics & Statistics, University of Agriculture Faisalabad , Faisalabad, Pakistan
| | - Shakeel Ahmad
- State Key Laboratory of Rice Biology, China National Rice Research Institute , Hangzhou, China
| | - Rida Fatima
- Genetically Modified Organism Testing Lab, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute , Faisalabad, Pakistan
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Viana JL, Soares-da-Silva J, Vieira-Neta MRA, Tadei WP, Oliveira CD, Abdalla FC, Peixoto CA, Pinheiro VCS. Isolates of Bacillus thuringiensis from Maranhão biomes with potential insecticidal action against Aedes aegypti larvae (Diptera, Culicidae). BRAZ J BIOL 2020; 81:114-124. [PMID: 32130286 DOI: 10.1590/1519-6984.223389] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Accepted: 10/23/2019] [Indexed: 11/22/2022] Open
Abstract
Entomopathogenic agents are viable and effective options due to their selective action against insects but benign effects on humans and the environment. The most promising entomopathogens include subspecies of Bacillus thuringiensis (Bt), which are widely used for the biological control of insects, including mosquito vectors of human pathogens. The efficacy of B. thuringiensis toxicity has led to the search for new potentially toxic isolates in different regions of the world. Therefore, soil samples from the Amazon, Cerrado and Caatinga biomes of the state of Maranhão were evaluated for their potential larvicidal action against Aedes aegypti. The isolates with high toxicity to mosquito larvae, as detected by bioassays, were subjected to histological evaluation under a light microscope to identify the genes potentially responsible for the toxicity. Additionally, the toxic effects of these isolates on the intestinal epithelium were assessed. In the new B. thuringiensis isolates toxic to A. aegypti larvae, cry and cyt genes were amplified at different frequencies, with cry4, cyt1, cry32, cry10 and cry11 being the most frequent (33-55%) among those investigated. These genes encode specific proteins toxic to dipterans and may explain the severe morphological changes in the intestine of A. aegypti larvae caused by the toxins of the isolates.
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Affiliation(s)
- J L Viana
- Programa de Pós-graduação em Biodiversidade e Biotecnologia da Rede BIONORTE - PPG BIONORTE, Universidade do Estado do Amazonas - UEA, Av. Carvalho Leal, 1777, Ed. Anexo, 4º andar, Cachoeirinha, CEP 69065-00, Manaus, AM, Brasil.,Laboratório de Entomologia Médica, Programa de Pós-graduação em Biodiversidade, Ambiente e Saúde, Centro de Estudos Superiores de Caxias - CESC, Universidade Estadual do Maranhão - UEMA, Praça Duque de Caxias, Morro do Alecrim, s/n, CEP 65604-380, Caxias, MA, Brasil
| | - J Soares-da-Silva
- Coordenação de Ciências Naturais/Biologia, Universidade Federal do Maranhão - UFMA, Campus VII, Av. Dr. José Anselmo, 2008, São Sebastião, CEP 65400-000, Codó, MA, Brasil
| | - M R A Vieira-Neta
- Universidade Federal de São Carlos - UFSCar, Campus Sorocaba, Rodovia João Leme dos Santos, SP-264, Km 110, Itinga, CEP 18052-780, Sorocaba, SP, Brasil
| | - W P Tadei
- Programa de Pós-graduação em Entomologia, Laboratório de Malária e Dengue, Instituto Nacional de Pesquisas da Amazônia - INPA, Av. André Araújo, 2936, Petrópolis, CEP 69067-375, Manaus, AM, Brasil
| | - C D Oliveira
- Grupo Mosquitos Vetores: Endosimbionte e Interação Patógeno Vetor, Centro de Pesquisa René Rachou, Av. Augusto de Lima, 1715, Barro Preto, CEP 30190-002, Belo Horizonte, MG, Brasil
| | - F C Abdalla
- Laboratório de Biologia Estrutural e Funcional - LABEF, Universidade Federal de São Carlos - UFSCar, Campus Sorocaba, Rodovia João Leme dos Santos, SP-264, Itinga, CEP 18052-780, Sorocaba, SP, Brasil
| | - C A Peixoto
- Laboratório de Ultraestrutura, Instituto de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz - FIOCRUZ, Av. Moraes Rego, s/n, Campus UFPE, Cidade Universitária, CEP 50740-465, Recife, PE, Brasil
| | - V C S Pinheiro
- Laboratório de Entomologia Médica, Departamento de Química e Biologia, Centro de Estudos Superiores de Caxias - CESC, Universidade Estadual do Maranhão - UEMA, Praça Duque de Caxias, s/n, Morro do Alecrim, CEP 65604-380, Caxias, MA, Brasil
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Synthesis and Characterization of Cry2Ab-AVM Bioconjugate: Enhanced Affinity to Binding Proteins and Insecticidal Activity. Toxins (Basel) 2019; 11:toxins11090497. [PMID: 31461921 PMCID: PMC6783867 DOI: 10.3390/toxins11090497] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Revised: 08/15/2019] [Accepted: 08/15/2019] [Indexed: 12/23/2022] Open
Abstract
Bacillus thuringiensis insecticidal proteins (Bt toxins) have been widely used in crops for agricultural pest management and to reduce the use of chemical insecticides. Here, we have engineered Bt toxin Cry2Ab30 and bioconjugated it with 4"-O-succinyl avermectin (AVM) to synthesize Cry2Ab-AVM bioconjugate. It was found that Cry2Ab-AVM showed higher insecticidal activity against Plutella xylostella, up to 154.4 times compared to Cry2Ab30. The binding results showed that Cry2Ab-AVM binds to the cadherin-like binding protein fragments, the 10th and 11th cadherin repeat domains in the P. xylostella cadherin (PxCR10-11), with a much higher affinity (dissociation equilibrium constant KD = 3.44 nM) than Cry2Ab30 (KD = 28.7 nM). Molecular docking suggested that the macrolide lactone group of Cry2Ab-AVM ligand docking into the PxCR10-11 is a potential mechanism to enhance the binding affinity of Cry2Ab-AVM to PxCR10-11. These findings offer scope for the engineering of Bt toxins by bioconjugation for improved pest management.
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Resistance status of Helicoverpa armigera against Bt cotton in Pakistan. Transgenic Res 2019; 28:199-212. [DOI: 10.1007/s11248-019-00114-9] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Accepted: 02/19/2019] [Indexed: 10/27/2022]
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