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Mailhiot S, Peuravaara P, Egleston BD, Kearsey RJ, Mareš J, Komulainen S, Selent A, Kantola AM, Cooper AI, Vaara J, Greenaway RL, Lantto P, Telkki VV. Gas Uptake and Thermodynamics in Porous Liquids Elucidated by 129Xe NMR. J Phys Chem Lett 2024; 15:5323-5330. [PMID: 38724016 PMCID: PMC11129303 DOI: 10.1021/acs.jpclett.4c00223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 03/22/2024] [Accepted: 04/11/2024] [Indexed: 05/24/2024]
Abstract
We exploited 129Xe NMR to investigate xenon gas uptake and dynamics in a porous liquid formed by dissolving porous organic cages in a cavity-excluded solvent. Quantitative 129Xe NMR shows that when the amount of xenon added to the sample is lower than the amount of cages present (subsaturation), the porous liquid absorbs almost all xenon atoms from the gas phase, with 30% of the cages occupied with a Xe atom. A simple two-site exchange model enables an estimate of the chemical shift of 129Xe in the cages, which is in good agreement with the value provided by first-principles modeling. T2 relaxation times allow the determination of the exchange rate of Xe between the solvent and cage sites as well as the activation energies of the exchange. The 129Xe NMR analysis also enables determination of the free energy of confinement, and it shows that Xe binding is predominantly enthalpy-driven.
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Affiliation(s)
- Sarah
E. Mailhiot
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Petri Peuravaara
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Benjamin D. Egleston
- Department
of Chemistry, Molecular Sciences Research Hub, Imperial College London, London, W12 0BZ, U.K.
| | - Rachel J. Kearsey
- Department
of Chemistry and Materials Innovation Factory, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K.
| | - Jiří Mareš
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Sanna Komulainen
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Anne Selent
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Anu M. Kantola
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Andrew I. Cooper
- Department
of Chemistry and Materials Innovation Factory, University of Liverpool, Crown Street, Liverpool L69 7ZD, U.K.
| | - Juha Vaara
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Rebecca L. Greenaway
- Department
of Chemistry, Molecular Sciences Research Hub, Imperial College London, London, W12 0BZ, U.K.
| | - Perttu Lantto
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
| | - Ville-Veikko Telkki
- NMR
Research Unit, Faculty of Science, University
of Oulu, P.O.Box 3000, FI-90014 Oulu, Finland
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2
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Saielli G. Computational NMR spectroscopy of 205 Tl. J Comput Chem 2023; 44:2016-2029. [PMID: 37367222 DOI: 10.1002/jcc.27176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 05/19/2023] [Accepted: 05/23/2023] [Indexed: 06/28/2023]
Abstract
We have investigated the NMR chemical shift of 205 Tl in several thallium compounds, ranging from small covalent Tl(I) and Tl(III) molecules to supramolecular complexes with large organic ligands and some thallium halides. NMR calculations were run at the ZORA relativistic level, with and without spin-orbit coupling using few selected GGA and hybrid functionals, namely BP86, PBE, B3LYP, and PBE0. We also tested solvent effects both at the optimization level and at the NMR calculation step. At the ZORA-SO-PBE0 (COSMO) level of theory we find a very good performance of the computational protocol that allows to discard or retain possible structures/conformations based on the agreement between the calculated chemical shift and the experimental value.
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Affiliation(s)
- Giacomo Saielli
- CNR Institute on Membrane Technology, Unit of Padova, Padova, Italy
- Department of Chemical Sciences, University of Padova, Padova, Italy
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3
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Krivdin LB. Computational NMR of heavy nuclei involving 109Ag, 113Cd, 119Sn, 125Te, 195Pt, 199Hg, 205Tl, and 207Pb. RUSSIAN CHEMICAL REVIEWS 2021. [DOI: 10.1070/rcr4976] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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4
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Chemical shift extremum of 129Xe(aq) reveals details of hydrophobic solvation. Sci Rep 2018; 8:7023. [PMID: 29728689 PMCID: PMC5935698 DOI: 10.1038/s41598-018-25418-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Accepted: 04/20/2018] [Indexed: 11/08/2022] Open
Abstract
The 129Xe chemical shift in an aqueous solution exhibits a non-monotonic temperature dependence, featuring a maximum at 311 K. This is in contrast to most liquids, where the monotonic decrease of the shift follows that of liquid density. In particular, the shift maximum in water occurs at a higher temperature than that of the maximum density. We replicate this behaviour qualitatively via a molecular dynamics simulation and computing the 129Xe chemical shift for snapshots of the simulation trajectory. We also construct a semianalytical model, in which the Xe atom occupies a cavity constituted by a spherical water shell, consisting of an even distribution of solvent molecules. The temperature dependence of the shift is seen to result from a product of the decreasing local water density and an increasing term corresponding to the energetics of the Xe-H2O collisions. The latter moves the chemical shift maximum up in temperature, as compared to the density maximum. In water, the computed temperature of the shift maximum is found to be sensitive to both the details of the binary chemical shift function and the coordination number. This work suggests that, material parameters allowing, the maximum should be exhibited by other liquids, too.
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Roukala J, Zhu J, Giri C, Rissanen K, Lantto P, Telkki VV. Encapsulation of xenon by a self-assembled Fe4L6 metallosupramolecular cage. J Am Chem Soc 2015; 137:2464-7. [PMID: 25671394 DOI: 10.1021/ja5130176] [Citation(s) in RCA: 73] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report (129)Xe NMR experiments showing that a Fe4L6 metallosupramolecular cage can encapsulate xenon in water with a binding constant of 16 M(-1). The observations pave the way for exploiting metallosupramolecular cages as economical means to extract rare gases as well as (129)Xe NMR-based bio-, pH, and temperature sensors. Xe in the Fe4L6 cage has an unusual chemical shift downfield from free Xe in water. The exchange rate between the encapsulated and free Xe was determined to be about 10 Hz, potentially allowing signal amplification via chemical exchange saturation transfer. Computational treatment showed that dynamical effects of Xe motion as well as relativistic effects have significant contributions to the chemical shift of Xe in the cage and enabled the replication of the observed linear temperature dependence of the shift.
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Affiliation(s)
- Juho Roukala
- NMR Research Group, Centre for Molecular Materials, University of Oulu , 90014 Oulu, Finland
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Karjalainen J, Vaara J, Straka M, Lantto P. Xenon NMR of liquid crystals confined to cylindrical nanocavities: a simulation study. Phys Chem Chem Phys 2015; 17:7158-71. [DOI: 10.1039/c4cp04868g] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Coarse-grained simulations show that the 129Xe NMR shielding reflects the smooth changes of orientational order in liquid crystals confined to nanocavities.
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Affiliation(s)
| | - Juha Vaara
- NMR Research Group
- University of Oulu
- Oulu
- Finland
| | - Michal Straka
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 16610 Prague
- Czech Republic
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Vícha J, Novotný J, Straka M, Repisky M, Ruud K, Komorovsky S, Marek R. Structure, solvent, and relativistic effects on the NMR chemical shifts in square-planar transition-metal complexes: assessment of DFT approaches. Phys Chem Chem Phys 2015; 17:24944-55. [DOI: 10.1039/c5cp04214c] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
The role of various factors (geometry, solvent, relativistic treatment, functional) influencing the relativistic NMR chemical shift calculations for square-planar transition-metal complexes.
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Affiliation(s)
- Jan Vícha
- CEITEC – Central European Institute of Technology
- Masaryk University
- CZ-62500 Brno
- Czech Republic
- Centre of Polymer Systems
| | - Jan Novotný
- CEITEC – Central European Institute of Technology
- Masaryk University
- CZ-62500 Brno
- Czech Republic
| | - Michal Straka
- CEITEC – Central European Institute of Technology
- Masaryk University
- CZ-62500 Brno
- Czech Republic
- Institute of Organic Chemistry and Biochemistry
| | - Michal Repisky
- Centre for Theoretical and Computational Chemistry
- Department of Chemistry
- UiT – The Arctic University of Norway
- N-9037 Tromsø
- Norway
| | - Kenneth Ruud
- Centre for Theoretical and Computational Chemistry
- Department of Chemistry
- UiT – The Arctic University of Norway
- N-9037 Tromsø
- Norway
| | - Stanislav Komorovsky
- Centre for Theoretical and Computational Chemistry
- Department of Chemistry
- UiT – The Arctic University of Norway
- N-9037 Tromsø
- Norway
| | - Radek Marek
- CEITEC – Central European Institute of Technology
- Masaryk University
- CZ-62500 Brno
- Czech Republic
- Department of Chemistry
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Kupka T, Stachów M, Nieradka M, Radula-Janik K, Stobiński L, Kaminský J. From small to medium and beyond: a pragmatic approach in predicting properties of Ne containing structures. Mol Phys 2013. [DOI: 10.1080/00268976.2013.848301] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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9
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Morgado P, Bonifácio R, Martins LFG, Filipe EJM. Probing the Structure of Liquids with 129Xe NMR Spectroscopy: n-Alkanes, Cycloalkanes, and Branched Alkanes. J Phys Chem B 2013; 117:9014-24. [DOI: 10.1021/jp4060507] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Pedro Morgado
- Centro de Química Estrutural,
Instituto Superior Técnico, Universidade Técnica de Lisboa, 1049-001 Lisboa, Portugal
| | - Rui Bonifácio
- Centro de Química Estrutural,
Instituto Superior Técnico, Universidade Técnica de Lisboa, 1049-001 Lisboa, Portugal
| | - Luís F. G. Martins
- Centro de Química de
Évora, Universidade de Évora, Rua Romão Ramalho, 59, 7000-671 Évora, Portugal
| | - Eduardo J. M. Filipe
- Centro de Química Estrutural,
Instituto Superior Técnico, Universidade Técnica de Lisboa, 1049-001 Lisboa, Portugal
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Standara S, Kulhánek P, Marek R, Straka M. 129Xe NMR chemical shift in Xe@C60calculated at experimental conditions: Essential role of the relativity, dynamics, and explicit solvent. J Comput Chem 2013; 34:1890-8. [DOI: 10.1002/jcc.23334] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2013] [Revised: 04/17/2013] [Accepted: 04/19/2013] [Indexed: 11/11/2022]
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Castiglione F, Simonutti R, Mauri M, Mele A. Cage-Like Local Structure of Ionic Liquids Revealed by a (129)Xe Chemical Shift. J Phys Chem Lett 2013; 4:1608-1612. [PMID: 26282967 DOI: 10.1021/jz400617v] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The chemical shift of xenon (at natural abundance) dissolved in a variety of 1-butyl-3-methylimidazolium-based ionic liquids (ILs) has been measured with (129)Xe NMR spectroscopy. The large chemical shift differences observed are mainly related to the type of anion; the strongest deshielding effect is observed ILs with I(-), Br(-), and Cl(-) anions, and the strongest shielding is found for the bis(trifluoromethanesulfonyl)imide ([Tf2N](-))-based IL. The measured (129)Xe chemical shift variations correlate well with the IL structure organization imposed by the anions and with the size of the empty voids due to charge alternation patterns. Descriptors taken from literature data on X-ray and neutron scattering, as well as single-crystal structures where available, support this interpretation. The proposed methodology adds a new investigating tool to the elucidation of the short-range order in ILs. The observed chemical shift trend provides information about how these solvents are organized.
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Affiliation(s)
- Franca Castiglione
- †Department of Chemistry, Materials and Chemical Engineering "G. Natta", Politecnico di Milano, Piazza L. Da Vinci 32, 20133 Milano, Italy
| | - Roberto Simonutti
- ‡Dipartimento di Scienza dei Materiali, Università degli Studi di Milano Bicocca, Via Roberto Cozzi 53, 20125 Milano, Italy
| | - Michele Mauri
- ‡Dipartimento di Scienza dei Materiali, Università degli Studi di Milano Bicocca, Via Roberto Cozzi 53, 20125 Milano, Italy
| | - Andrea Mele
- †Department of Chemistry, Materials and Chemical Engineering "G. Natta", Politecnico di Milano, Piazza L. Da Vinci 32, 20133 Milano, Italy
- §CNR - Istituto di Chimica del Riconoscimento Molecolare, Via L. Mancinelli 7, 20131 Milano, Italy
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12
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Vícha J, Patzschke M, Marek R. A relativistic DFT methodology for calculating the structures and NMR chemical shifts of octahedral platinum and iridium complexes. Phys Chem Chem Phys 2013; 15:7740-54. [DOI: 10.1039/c3cp44440f] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Kaminský J, Buděšínský M, Taubert S, Bouř P, Straka M. Fullerene C70 characterization by 13C NMR and the importance of the solvent and dynamics in spectral simulations. Phys Chem Chem Phys 2013; 15:9223-30. [DOI: 10.1039/c3cp50657f] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Lantto P, Kangasvieri S, Vaara J. Electron correlation and relativistic effects in the secondary NMR isotope shifts of CSe2. Phys Chem Chem Phys 2013; 15:17468-78. [DOI: 10.1039/c3cp51904j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15
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Lantto P, Kangasvieri S, Vaara J. Rovibrational effects on NMR shieldings in a heavy-element system: XeF2. J Chem Phys 2012; 137:214309. [DOI: 10.1063/1.4768471] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
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16
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Lantto P, Standara S, Riedel S, Vaara J, Straka M. Exploring new 129Xe chemical shift ranges in HXeY compounds: hydrogen more relativistic than xenon. Phys Chem Chem Phys 2012; 14:10944-52. [DOI: 10.1039/c2cp41240c] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Pawlak T, Munzarová ML, Pazderski L, Marek R. Validation of Relativistic DFT Approaches to the Calculation of NMR Chemical Shifts in Square-Planar Pt2+ and Au3+ Complexes. J Chem Theory Comput 2011; 7:3909-23. [DOI: 10.1021/ct200366n] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Tomasz Pawlak
- Center of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, PL-90363 Łódź, Poland
- Faculty of Chemistry, Nicholas Copernicus University, Gagarina 7, PL-87100 Toruń, Poland
| | | | - Leszek Pazderski
- Faculty of Chemistry, Nicholas Copernicus University, Gagarina 7, PL-87100 Toruń, Poland
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18
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Garbacz P, Piszczatowski K, Jackowski K, Moszynski R, Jaszuński M. Weak intermolecular interactions in gas-phase nuclear magnetic resonance. J Chem Phys 2011; 135:084310. [DOI: 10.1063/1.3624658] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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19
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Roukala J, Maldonado AF, Vaara J, Aucar GA, Lantto P. Relativistic effects on group-12 metal nuclear shieldings. Phys Chem Chem Phys 2011; 13:21016-25. [DOI: 10.1039/c1cp22043h] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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