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Novara C, Montesi D, Bertone S, Paccotti N, Geobaldo F, Channab M, Angelini A, Rivolo P, Giorgis F, Chiadò A. Role of probe design and bioassay configuration in surface enhanced Raman scattering based biosensors for miRNA detection. J Colloid Interface Sci 2023; 649:750-760. [PMID: 37385040 DOI: 10.1016/j.jcis.2023.06.090] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Revised: 06/01/2023] [Accepted: 06/14/2023] [Indexed: 07/01/2023]
Abstract
The accurate design of labelled oligo probes for the detection of miRNA biomarkers by Surface Enhanced Raman Scattering (SERS) may improve the exploitation of the plasmonic enhancement. This work, thus, critically investigates the role of probe labelling configuration on the performance of SERS-based bioassays for miRNA quantitation. To this aim, highly efficient SERS substrates based on Ag-decorated porous silicon/PDMS membranes are functionalized according to bioassays relying on a one-step or two-step hybridization of the target miRNA with DNA probes. Then, the detection configuration is varied to evaluate the impact of different Raman reporters and their labelling position along the oligo sequence on bioassay sensitivity. At high miRNA concentration (100-10 nM), a significantly increased SERS intensity is detected when the reporters are located closer to the plasmonic surface compared to farther probe labelling positions. Counterintuitively, a levelling-off of the SERS intensity from the different configurations is recorded at low miRNA concentration. Such effect is attributed to the increased relative contribution of Raman hot-spots to the whole SERS signal, in line with the electric near field distribution simulated for a simplified model of the Ag nanostructures. However, the beneficial effect of reducing the reporter-to-surface distance is partially retained for a two-step hybridization assay thanks to the less sterically hindered environment in which the second hybridization occurs. The study thus demonstrates an improvement of the detection limit of the two-step assay by tuning the probe labelling position, but sheds at the same time light on the multiple factors affecting the sensitivity of SERS-based bioassays.
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Affiliation(s)
- Chiara Novara
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy.
| | - Daniel Montesi
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
| | - Sofia Bertone
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
| | - Niccolò Paccotti
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
| | - Francesco Geobaldo
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
| | - Marwan Channab
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy; Advanced Materials and Life Sciences, Istituto Nazionale di Ricerca Metrologica (INRiM), Strada delle Cacce 91, Turin 10135, Italy
| | - Angelo Angelini
- Advanced Materials and Life Sciences, Istituto Nazionale di Ricerca Metrologica (INRiM), Strada delle Cacce 91, Turin 10135, Italy
| | - Paola Rivolo
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
| | - Fabrizio Giorgis
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy.
| | - Alessandro Chiadò
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi, 24, 10129 Turin, Italy
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2
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Nah SH, Unsihuay D, Wang P, Yang S. A Highly Sensitive and Specific Photonic Crystal-Based Opioid Sensor with Rapid Regeneration. ACS APPLIED MATERIALS & INTERFACES 2023; 15:27647-27657. [PMID: 37252783 PMCID: PMC10636717 DOI: 10.1021/acsami.3c03722] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Opioid misuse and overdose have caused devastating public health challenges and economic burdens, calling for the need of rapid, accurate sensitive opioid sensors. Here, we report a photonic crystal-based opioid sensor in the total internal reflection configuration, providing label-free, rapid, quantitative measurements through change of the refractive index. The one-dimensional photonic crystal with a defect layer that is immobilized with opioid antibodies acts as a resonator with an open microcavity. The highly accessible structure responds to analytes within a minute after the aqueous opioid solution is introduced, achieving the highest sensitivity of 5688.8 nm/refractive index unit (RIU) at the incident angle of 63.03°. Our sensor shows a limit of detection (LOD) of 7 ng/mL for morphine in phosphate-buffered saline (PBS, pH 7.4) solutions, well below the required clinical detection limit, and an LOD of 6 ng/mL for fentanyl in PBS, close to the clinical requirement. The sensor can selectively detect fentanyl from a mixture of morphine and fentanyl and be regenerated in 2 min with up to 93.66% recovery rate after five cycles. The efficacy of our sensor is further validated in artificial interstitial fluid and human urine samples.
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Affiliation(s)
- So Hee Nah
- Department of Materials Science and Engineering, University of Pennsylvania, 3231 Walnut Street, Philadelphia, Pennsylvania 19104 United States
| | - Daisy Unsihuay
- Department of Pathology and Laboratory Medicine, University of Pennsylvania, 3400 Spruce Street, Philadelphia, Pennsylvania 19104 United States
| | - Ping Wang
- Department of Pathology and Laboratory Medicine, University of Pennsylvania, 3400 Spruce Street, Philadelphia, Pennsylvania 19104 United States
| | - Shu Yang
- Department of Materials Science and Engineering, University of Pennsylvania, 3231 Walnut Street, Philadelphia, Pennsylvania 19104 United States
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3
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Functional 3D printing: Approaches and bioapplications. Biosens Bioelectron 2020; 175:112849. [PMID: 33250333 DOI: 10.1016/j.bios.2020.112849] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/28/2020] [Accepted: 11/22/2020] [Indexed: 12/17/2022]
Abstract
3D printing technology has become a mature manufacturing technique, widely used for its advantages over the traditional methods, such as the end-user customization and rapid prototyping, useful in different application fields, including the biomedical one. Indeed, it represents a helpful tool for the realization of biodevices (i.e. biosensors, microfluidic bioreactors, drug delivery systems and Lab-On-Chip). In this perspective, the development of 3D printable materials with intrinsic functionalities, through the so-called 4D printing, introduces novel opportunities for the fabrication of "smart" or stimuli-responsive devices. Indeed, functional 3D printable materials can modify their surfaces, structures, properties or even shape in response to specific stimuli (such as pressure, temperature or light radiation), adding to the printed object new interesting properties exploited after the fabrication process. In this context, by combining 3D printing technology with an accurate materials' design, functional 3D objects with built-in (bio)chemical functionalities, having biorecognition, biocatalytic and drug delivery capabilities are here reported.
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Agarwal DK, Kushagra A, Ashwin M, Shukla AS, Palaparthy V. Sensitive detection of cardiac troponin-I protein using fabricated piezoresistive microcantilevers by a novel method of asymmetric biofunctionalization. NANOTECHNOLOGY 2020; 31:115503. [PMID: 31751958 DOI: 10.1088/1361-6528/ab5a18] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Microcantilever-based sensor platform has attracted a lot of attention over the time in detection of a variety of molecules due to their miniaturized dimensions. Sensitivity enhancement is an important aspect of such sensors, especially when used for point-of-care diagnostic purpose. However, the major concern while operating these sensors in deflection mode is their sensitivity which mainly relies on selective chemical modification protocols employed on these sensor surfaces. One of the ways of getting better sensitivity is through asymmetric (one side) biofunctionalization of the sensor surface. In the presented work here, we have demonstrated a novel approach of asymmetric biofunctionalization of proteins in overall sensitivity enhancement of piezoresistive silicon nitride-oxide microcantilever sensor platform inside a flow chamber. Herein, using our developed surface chemistry, asymmetrically biofunctionalized microcantilevers first exhibited a greater electrical response in terms of piezoresistance change than their symmetric counterpart in the detection of human immunoglobulins (HIgGs) protein. Finally, these microcantilevers were employed to exhibit the enhanced sensitivity towards the detection of a crucial cardiac marker protein, i.e. Troponin-I (cTnI) down to 250 ng ml-1 using asymmetric biofunctionalization process. This study shows that the developed asymmetric biofunctionalization methodology may be used as a general protocol to detect other important biomarkers of clinical applications with improved sensitivity.
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Affiliation(s)
- Dilip Kumar Agarwal
- Centre for Research in Nanotechnology and Science, Indian Institute of Technology Bombay, Mumbai, India. Centre of Excellence in Nanoelectronics, Dept. of Electrical Engineering, Indian Institute of Technology Bombay, Mumbai, India
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Chiadò A, Palmara G, Chiappone A, Tanzanu C, Pirri CF, Roppolo I, Frascella F. A modular 3D printed lab-on-a-chip for early cancer detection. LAB ON A CHIP 2020; 20:665-674. [PMID: 31939966 DOI: 10.1039/c9lc01108k] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
A functional polymeric 3D device is produced in a single step printing process using a stereolithography based 3D printer. The photocurable formulation is designed for introducing a controlled amount of carboxyl groups (-COOH), in order to perform a covalent immobilization of bioreceptors on the device. The effectiveness of the application is demonstrated by performing an immunoassay for the detection of protein biomarkers involved in angiogenesis, whose role is crucial in the onset of cancer and in the progressive metastatic behavior of tumors. The detection of angiogenesis biomarkers is necessary for an early diagnosis of the pathology, allowing the employment of a less invasive therapy for the patient. In particular, vascular endothelial growth factor and angiopoietin-2 biomarkers are detected with a limit of detection of 11 ng mL-1 and 0.8 ng mL-1, respectively. This study shows how 3D microfabrication techniques, material characterization, and device development could be combined to obtain an engineered polymeric chip with intrinsic tuned functionalities.
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Affiliation(s)
- Alessandro Chiadò
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
| | - Gianluca Palmara
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
| | - Annalisa Chiappone
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
| | - Claudia Tanzanu
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
| | - Candido Fabrizio Pirri
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy. and Center for Sustainable Future Technologies @Polito, Istituto Italiano di Tecnologia, Corso Trento 21, Torino 10129, Italy
| | - Ignazio Roppolo
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
| | - Francesca Frascella
- Department of Applied Science and Technology, Politecnico di Torino, Corso Duca degli Abruzzi 24, Torino, 10129, Italy.
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6
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Pasternak G, Hanczyc MM. Novel method for detecting and quantifying phenol with transient response of glycolytic oscillations of synchronised yeast cells. SENSING AND BIO-SENSING RESEARCH 2019. [DOI: 10.1016/j.sbsr.2019.100259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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7
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Stassi S, Fantino E, Calmo R, Chiappone A, Gillono M, Scaiola D, Pirri CF, Ricciardi C, Chiadò A, Roppolo I. Polymeric 3D Printed Functional Microcantilevers for Biosensing Applications. ACS APPLIED MATERIALS & INTERFACES 2017; 9:19193-19201. [PMID: 28530385 DOI: 10.1021/acsami.7b04030] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
In this study, we show for the first time the production of mass-sensitive polymeric biosensors by 3D printing technology with intrinsic functionalities. We also demonstrate the feasibility of mass-sensitive biosensors in the form of microcantilever in a one-step printing process, using acrylic acid as functional comonomer for introducing a controlled amount of functional groups that can covalently immobilize the biomolecules onto the polymer. The effectiveness of the application of 3D printed microcantilevers as biosensors is then demonstrated with their implementation in a standard immunoassay protocol. This study shows how 3D microfabrication techniques, material characterization, and biosensor development could be combined to obtain an engineered polymeric microcantilever with intrinsic functionalities. The possibility of tuning the composition of the starting photocurable resin with the addition of functional agents, and consequently controlling the functionalities of the 3D printed devices, paves the way to a new class of mass-sensing microelectromechanical system devices with intrinsic properties.
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Affiliation(s)
- Stefano Stassi
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Erika Fantino
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Roberta Calmo
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Annalisa Chiappone
- Center for Sustainable Future Technologies, Istituto Italiano di Tecnologia , Corso Trento 21, Torino 10129, Italy
| | - Matteo Gillono
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
- Center for Sustainable Future Technologies, Istituto Italiano di Tecnologia , Corso Trento 21, Torino 10129, Italy
| | - Davide Scaiola
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Candido Fabrizio Pirri
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
- Center for Sustainable Future Technologies, Istituto Italiano di Tecnologia , Corso Trento 21, Torino 10129, Italy
| | - Carlo Ricciardi
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Alessandro Chiadò
- Department of Applied Science and Technology, Politecnico di Torino , Corso Duca degli Abruzzi 24, Torino 10129, Italy
| | - Ignazio Roppolo
- Center for Sustainable Future Technologies, Istituto Italiano di Tecnologia , Corso Trento 21, Torino 10129, Italy
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8
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Experimental evidence of Fano resonances in nanomechanical resonators. Sci Rep 2017; 7:1065. [PMID: 28432315 PMCID: PMC5430710 DOI: 10.1038/s41598-017-01147-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2017] [Accepted: 03/27/2017] [Indexed: 11/17/2022] Open
Abstract
Fano resonance refers to an interference between localized and continuum states that was firstly reported for atomic physics and solid-state quantum devices. In recent years, Fano interference gained more and more attention for its importance in metamaterials, nanoscale photonic devices, plasmonic nanoclusters and surface-enhanced Raman scattering (SERS). Despite such interest in nano-optics, no experimental evidence of Fano interference was reported up to now for purely nanomechanical resonators, even if classical mechanical analogies were referred from a theoretical point of view. Here we demonstrate for the first time that harmonic nanomechanical resonators with relatively high quality factors, such as cantilevers vibrating in vacuum, can show characteristic Fano asymmetric curves when coupled in arrays. The reported findings open new perspectives in fundamental aspects of classical nanomechanical resonators and pave the way to a new generation of chemical and biological nanoresonator sensors with higher parallelization capability.
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9
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Stassi S, Chiadò A, Cauda V, Palmara G, Canavese G, Laurenti M, Ricciardi C. Functionalized ZnO nanowires for microcantilever biosensors with enhanced binding capability. Anal Bioanal Chem 2017; 409:2615-2625. [DOI: 10.1007/s00216-017-0204-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Revised: 12/22/2016] [Accepted: 01/11/2017] [Indexed: 01/31/2023]
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10
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Novara C, Chiadò A, Paccotti N, Catuogno S, Esposito CL, Condorelli G, De Franciscis V, Geobaldo F, Rivolo P, Giorgis F. SERS-active metal-dielectric nanostructures integrated in microfluidic devices for label-free quantitative detection of miRNA. Faraday Discuss 2017; 205:271-289. [DOI: 10.1039/c7fd00140a] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
In this work, SERS-based microfluidic PDMS chips integrating silver-coated porous silicon membranes were used for the detection and quantitation of microRNAs (miRNAs), which consist of short regulatory non-coding RNA sequences typically over- or under-expressed in connection with several diseases such as oncogenesis. In detail, metal–dielectric nanostructures which provide noticeable Raman enhancements were functionalized according to a biological protocol, adapted and optimized from an enzyme-linked immunosorbent assay (ELISA), for the detection of miR-222. Two sets of experiments based on different approaches were designed and performed, yielding a critical comparison. In the first one, the labelled target miRNA is revealed through hybridization to a complementary thiolated DNA probe, immobilized on the silver nanoparticles. In the second one, the probe is halved into shorter strands (half1 and half2) that interact with the complementary miRNA in two steps of hybridization. Such an approach, taking advantage of the Raman labelling of half2, provides a label-free analysis of the target. After suitable optimisation of the procedures, two calibration curves allowing quantitative measurements were obtained and compared on the basis of the SERS maps acquired on the samples loaded with several miRNA concentrations. The selectivity of the two-step assay was confirmed by the detection of target miR-222 mixed with different synthetic oligos, simulating the hybridization interference coming from similar sequences in real biological samples. Finally, that protocol was applied to the analysis of miR-222 in cellular extracts using an optofluidic multichamber biosensor, confirming the potentialities of SERS-based microfluidics for early-cancer diagnosis.
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Affiliation(s)
- Chiara Novara
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
| | - Alessandro Chiadò
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
| | - Niccolò Paccotti
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
| | - Silvia Catuogno
- Institute of Endocrinology and Experimental Oncology of Italian National Research Council
- Naples
- Italy
| | - Carla Lucia Esposito
- Institute of Endocrinology and Experimental Oncology of Italian National Research Council
- Naples
- Italy
| | - Gerolama Condorelli
- Institute of Endocrinology and Experimental Oncology of Italian National Research Council
- Naples
- Italy
- Department of Molecular Medicine and Medical Biotechnology
- “Federico II” University of Naples
| | - Vittorio De Franciscis
- Institute of Endocrinology and Experimental Oncology of Italian National Research Council
- Naples
- Italy
| | - Francesco Geobaldo
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
| | - Paola Rivolo
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
| | - Fabrizio Giorgis
- Department of Applied Science and Technology
- Politecnico di Torino
- Turin
- Italy
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11
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Chiadò A, Novara C, Lamberti A, Geobaldo F, Giorgis F, Rivolo P. Immobilization of Oligonucleotides on Metal-Dielectric Nanostructures for miRNA Detection. Anal Chem 2016; 88:9554-9563. [DOI: 10.1021/acs.analchem.6b02186] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Alessandro Chiadò
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
| | - Chiara Novara
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
| | - Andrea Lamberti
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
| | - Francesco Geobaldo
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
| | - Fabrizio Giorgis
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
| | - Paola Rivolo
- Department
of Applied Science
and Technology, Politecnico di Torino, C.so Duca degli Abruzzi 24 10129, Torino, Italy
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