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For: Zheng T, Ichiba T, Morton BR. Assessing substitution variation across sites in grass chloroplast DNA. J Mol Evol 2007;64:605-13. [PMID: 17541677 DOI: 10.1007/s00239-006-0076-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2006] [Accepted: 02/28/2007] [Indexed: 11/24/2022]
Number Cited by Other Article(s)
1
Morton BR. Substitution rate heterogeneity across hexanucleotide contexts in noncoding chloroplast DNA. G3 GENES|GENOMES|GENETICS 2022;12:6608088. [PMID: 35699494 PMCID: PMC9339276 DOI: 10.1093/g3journal/jkac150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Accepted: 06/07/2022] [Indexed: 11/13/2022]
2
Kalkus A, Barrett J, Ashok T, Morton BR. Evidence from simulation studies for selective constraints on the codon usage of the Angiosperm psbA gene. PLoS Comput Biol 2021;17:e1009535. [PMID: 34699531 PMCID: PMC8570520 DOI: 10.1371/journal.pcbi.1009535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 11/05/2021] [Accepted: 10/06/2021] [Indexed: 11/24/2022]  Open
3
Hoekstra PH, Wieringa JJ, Smets E, Brandão RD, Lopes JDC, Erkens RHJ, Chatrou LW. Correlated evolutionary rates across genomic compartments in Annonaceae. Mol Phylogenet Evol 2017;114:63-72. [PMID: 28578201 DOI: 10.1016/j.ympev.2017.05.026] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2017] [Revised: 05/29/2017] [Accepted: 05/29/2017] [Indexed: 11/28/2022]
4
Suzuki H, Morton BR. Codon Adaptation of Plastid Genes. PLoS One 2016;11:e0154306. [PMID: 27196606 PMCID: PMC4873144 DOI: 10.1371/journal.pone.0154306] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2015] [Accepted: 04/12/2016] [Indexed: 12/05/2022]  Open
5
Gaut B, Yang L, Takuno S, Eguiarte LE. The Patterns and Causes of Variation in Plant Nucleotide Substitution Rates. ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS 2011. [DOI: 10.1146/annurev-ecolsys-102710-145119] [Citation(s) in RCA: 114] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
6
Context-Dependent Evolutionary Models for Non-Coding Sequences: An Overview of Several Decades of Research and an Analysis of Laurasiatheria and Primate Evolution. Evol Biol 2011. [DOI: 10.1007/s11692-011-9139-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
7
Nevarez PA, DeBoever CM, Freeland BJ, Quitt MA, Bush EC. Context dependent substitution biases vary within the human genome. BMC Bioinformatics 2010;11:462. [PMID: 20843365 PMCID: PMC2945941 DOI: 10.1186/1471-2105-11-462] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2010] [Accepted: 09/15/2010] [Indexed: 01/16/2023]  Open
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