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Isolation and identification of the molybdenum-resistant strain Raoultella ornithinolytica A1 and its effect on MoO 42- in the environment. Biodegradation 2023; 34:169-180. [PMID: 36596915 DOI: 10.1007/s10532-022-10011-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Accepted: 12/19/2022] [Indexed: 01/05/2023]
Abstract
The mining and leakage of molybdenum (Mo) can cause environmental contamination which has not been realized until recently. Bacteria that can mitigate Mo-contamination was enriched and isolated. The low temperature and different pH conditions were considered to analysis its feasibility in Northern China which suffers from a long time of low temperatures every year. The result showed that the removal rate of MoO42- by Raoultella ornithinolytica A1 reached 30.46% at 25 °C and pH 7.0 in Luria-Bertani medium (LB). Meanwhile, A1 also showed some efficiency in the reduction of MoO42- in low phosphate molybdate medium (LPM), which reached optimum at the MoO42- concentration of 10 mM. The results of FTIR indicated that the cell wall performed an essential role in the MoO42- removal process, which was illustrated by the distribution of Mo in A1 (Mo bound to cell wall accounted for 92.29% of the total MoO42- removed). In addition, low temperature (10 °C) effect the removal rate of MoO42- by - 8.38 to 11.66%, indicating the potential for the in-situ microbial remediation of Mo-contaminated environments in low temperature areas.
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El-Sayed ESR, Zaki AG. Unlocking the biosynthetic potential of Penicillium roqueforti for hyperproduction of the immunosuppressant mycophenolic acid: Gamma radiation mutagenesis and response surface optimization of fermentation medium. Biotechnol Appl Biochem 2023; 70:306-317. [PMID: 35481612 DOI: 10.1002/bab.2353] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Accepted: 04/10/2022] [Indexed: 11/09/2022]
Abstract
Based on the broad clinical utility of the immunosuppressant mycophenolic acid (MPA), this article aims to intensify the biosynthetic potential of Penicillium roqueforti for more effective hyperproduction of the drug. Several mutants were generated from irradiation mutagenesis and screened. Two strains (GM1013 and GM1093) presented an elevated MPA productivity with significant yield constancy over 10 subsequent generations. By investigating the effect of some phosphorous sources and mineral salts on MPA production by the two mutants, KH2 PO4 and FeSO4 ·7H2 O were most preferred by the two mutants for higher MPA production rates. Statistics-dependent experimental designs were also employed for optimizing medium components for maximum MPA production. Medium components were primarily screened using the Plackett-Burman model to demonstrate the most important components that most significantly affect MPA production. The concentrations of these significant components were then optimized through a central composite rotatable model. In conclusion, gamma-radiation mutation and response surface optimization resulted in a promising MPA productivity by P. roqueforti GM1013. To our knowledge, the MPA-yield achieved in this study (2933.32 mg L-1 ) is the highest reported by academic laboratories from P. roqueforti cultures, which could be of economic value for a prospective large industrialized application.
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Affiliation(s)
- El-Sayed R El-Sayed
- Plant Research Department, Nuclear Research Center, Egyptian Atomic Energy Authority, Cairo, Egypt
| | - Amira G Zaki
- Plant Research Department, Nuclear Research Center, Egyptian Atomic Energy Authority, Cairo, Egypt
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Zaki AG, Hasanien YA, Abdel-Razek AS. Biosorption optimization of lead(II) and cadmium(II) ions by two novel nanosilica-immobilized fungal mutants. J Appl Microbiol 2022; 133:987-1000. [PMID: 35578549 DOI: 10.1111/jam.15624] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Revised: 05/10/2022] [Accepted: 05/12/2022] [Indexed: 11/26/2022]
Abstract
AIMS This study aims at immobilization of fungal mutants on nanosilica-carriers for designing efficient biosorbents as a significant new technology for decontamination practices and maximizing their heavy metal (HM) sorption proficiency through the experimental design methodology. MATERIALS AND RESULTS Endophytic fungal mutant strains, Chaetomium globosum El26 mutant and Alternaria alternata S5 mutant were heat inactivated then immobilized, each separately, on nanosilica (NSi) carriers to formulate two separated nano-biosorbents. The formulated NSi-Chaetomium globosum El26 mutant (NSi-Chae El26 m) was investigated for Pb+2 uptake while, the formulated NSi-Alternaria alternata S5 mutant (NSi-Alt S5 m) was investigated for Cd+2 uptake, each through a batch equilibrium protocol. Before and after the metal sorption process, the designed nano-biosorbents were characterized via scanning electron microscopy, energy-dispersive X-ray spectroscopy, and Fourier Transform Infrared analysis. Sorption pH, contact time, sorbent concentration, and initial HM concentration, were statistically optimized using a Box-Behnken design (BBD). Results showed that NSi-Chae El26 m was efficient in Pb+2 uptake with maximum biosorption capacities of 199.0 while, NSi-Alt S5 m was efficient in Cd+2 uptake with maximum biosorption capacities of 162.0 mg∙g-1 . Moreover, the equilibrium data indicated that the adsorption of Pb+2 and Cd+2 by the tested nano-biosorbents fitted to the Freundlich isotherm. CONCLUSIONS The formulated nano-biosorbents resulted in higher HM biosorption of metal ions from aqueous solution than that obtained by the free fungal biomass. The biosorption statistical modelling described the interactions between the tested sorption parameters and predicted the optimum values for maximum HM biosorption capacity by the two designed nano-biosorbents. SIGNIFICANCE AND IMPACT OF THE STUDY These findings verify that members of the endophytic fungal genera Alternaria and Chaetomium are suitable to produce nano-biosorbents for decontamination practices after treatment by gamma mutagenesis, heat inactivation, and nanosilica immobilization. Moreover, statistical optimization can assist to evaluate the optimal conditions to produce such bioremediation material.
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Affiliation(s)
- Amira G Zaki
- Plant Research Department, Nuclear Research Center, Egyptian Atomic Energy Authority, Cairo, Egypt
| | - Yasmeen A Hasanien
- Plant Research Department, Nuclear Research Center, Egyptian Atomic Energy Authority, Cairo, Egypt
| | - Alaa S Abdel-Razek
- Radiation Protection and Safety Department, Hot Labs Center, Egyptian Atomic Energy Authority, Cairo, Egypt
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Zaki AG, Hasanien YA, El-Sayyad GS. Novel fabrication of SiO 2/Ag nanocomposite by gamma irradiated Fusarium oxysporum to combat Ralstonia solanacearum. AMB Express 2022; 12:25. [PMID: 35229228 PMCID: PMC8885861 DOI: 10.1186/s13568-022-01372-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 02/21/2022] [Indexed: 12/11/2022] Open
Abstract
The bacterial wilt is a global destructive plant disease that initiated by the phytopathogenic Ralstonia solanacearum. This study display a novel biofabrication of silica/silver nanocomposite using Fusarium oxysporum-fermented rice husk (RH) under solid state fermentation (SSF). The biofabricated nanocomposite was characterized by XRD, UV-Vis. spectroscopy, DLS, SEM, EDX elemental mapping, and TEM analyses as well as investigated for anti-R. solanacearum activity. Response surface methodology was also processed for optimizing the biofabrication process and improving the anti-bacterial activity of the fabricated nanocomposite. Maximum suppression zone of 29.5 mm against R. solanacearum was reached at optimum RH content of 6.0 g, AgNO3 concentration of 2.50 mM, reaction pH of 6.3, and reaction time of 2 days. The anti-R. solanacearum activity of the fabricated nanocomposite was further improved by exposing the F. oxysporum strain to a gamma irradiation dose of 200 Gy. In conclusion, RH recycling under SSF by F. oxysporum could provide an innovative, facile, non-expensive, and green approach for fabricating SiO2/Ag nanocomposite that could be applied efficiently as an eco-friendly antibacterial agent to combat R. solanacearum in agricultural applications. Moreover, the developed method could serve as a significant platform for the designing of new nanostructures for broad applications.
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Affiliation(s)
- Amira G. Zaki
- Plant Research Department, Nuclear Research Center (NRC), Egyptian Atomic Energy Authority (EAEA), Cairo, Egypt
| | - Yasmeen A. Hasanien
- Plant Research Department, Nuclear Research Center (NRC), Egyptian Atomic Energy Authority (EAEA), Cairo, Egypt
| | - Gharieb S. El-Sayyad
- Drug Radiation Research Department, National Center for Radiation Research and Technology (NCRRT), Egyptian Atomic Energy Authority (EAEA), Cairo, Egypt
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Identification, characterization and hydrolase producing performance of thermophilic bacteria: geothermal hot springs in the Eastern and Southeastern Anatolia Regions of Turkey. Antonie van Leeuwenhoek 2022; 115:253-270. [PMID: 35031914 PMCID: PMC8760091 DOI: 10.1007/s10482-021-01678-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Accepted: 10/18/2021] [Indexed: 10/28/2022]
Abstract
In the last two decades, researchers have increasingly focused on the rich microorganism-based diversity of natural hot spring sources to explore the benefits of thermophiles in industrial and biotechnological fields. Within the scope of this study, a total of 83 thermophilic Bacilli strains were isolated from 7 different geothermal hot springs (at temperatures ranging between 40 and 85 °C) located in the Eastern and Southeastern Anatolia Regions of Turkey. The physiological, morphological, biochemical and molecular properties of the isolates were determined. As a result of the 16S rRNA gene sequence analysis, 5 different species (Bacillus licheniformis, Bacillus sp., Bacillus subtilis, Geobacillus kaustophilus, and Weizmannia coagulans,) were identified. B. licheniformis and B. subtilis were the most frequently encountered species among those obtained from the researched hot spring sources. Phylogenetic analysis was conducted to evaluate the phylogenetic relationships of the isolated species. The results showed that there was no significant difference between the groups and the bacteria in terms of the locations or optimum temperatures of the isolates. The bacterial isolates were screened for amylase, cellulase, lipase and protease hydrolytic enzyme activities. The hydrolytic enzyme production potentials among the isolates were identified in 68 (82%) isolates for amylase, 34 (41%) for cellulase, 69 (83%) for lipase and 73 (88%) for protease. All isolates were found to have at least one or more extracellular enzyme activities. Additionally, it was determined that 27 of the existing isolates (32.8%) were able to produce all of the aforementioned hydrolytic enzymes.
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Yakasai HM, Rahman MF, Manogaran M, Yasid NA, Syed MA, Shamaan NA, Shukor MY. Microbiological Reduction of Molybdenum to Molybdenum Blue as a Sustainable Remediation Tool for Molybdenum: A Comprehensive Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:5731. [PMID: 34071757 PMCID: PMC8198738 DOI: 10.3390/ijerph18115731] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Revised: 04/07/2021] [Accepted: 04/08/2021] [Indexed: 11/19/2022]
Abstract
Molybdenum (Mo) microbial bioreduction is a phenomenon that is beginning to be recognized globally as a tool for the remediation of molybdenum toxicity. Molybdenum toxicity continues to be demonstrated in many animal models of spermatogenesis and oogenesis, particularly those of ruminants. The phenomenon has been reported for more than 100 years without a clear understanding of the reduction mechanism, indicating a clear gap in the scientific knowledge. This knowledge is not just fundamentally important-it is specifically important in applications for bioremediation measures and the sustainable recovery of metal from industrial or mine effluent. To date, about 52 molybdenum-reducing bacteria have been isolated globally. An increasing number of reports have also been published regarding the assimilation of other xenobiotics. This phenomenon is likely to be observed in current and future events in which the remediation of xenobiotics requires microorganisms capable of degrading or transforming multi-xenobiotics. This review aimed to comprehensively catalogue all of the characterizations of molybdenum-reducing microorganisms to date and identify future opportunities and improvements.
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Affiliation(s)
- Hafeez Muhammad Yakasai
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
- Department of Biochemistry, Faculty of Basic Medical Sciences, College of Health Science, Bayero University, Kano PMB 3011, Nigeria
| | - Mohd Fadhil Rahman
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
| | - Motharasan Manogaran
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
| | - Nur Adeela Yasid
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
| | - Mohd Arif Syed
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
| | - Nor Aripin Shamaan
- Faculty of Medicine and Health Sciences, Universiti Sains Islam Malaysia, Kuala Lumpur 55100, Malaysia;
| | - Mohd Yunus Shukor
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang 43400, Malaysia; (H.M.Y.); (M.F.R.); (M.M.); (N.A.Y.); (M.A.S.)
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Saeed AM, El-Shatoury EH, Sayed HAE. Statistical factorial designs for optimum production of thermostable α-amylase by the degradative bacterium Parageobacillus thermoglucosidasius Pharon1 isolated from Sinai, Egypt. J Genet Eng Biotechnol 2021; 19:24. [PMID: 33523315 PMCID: PMC7851196 DOI: 10.1186/s43141-021-00123-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Accepted: 01/20/2021] [Indexed: 12/19/2022]
Abstract
BACKGROUND This study aimed to isolate potent thermophilic and amylolytic bacteria from a hot spring of Pharaoh's bath, Sinai, Egypt, and screen its degradative activity. The amylolytic activity was further optimized using a statistical full factorial design followed by response surface methodology. RESULTS A thermophilic bacterium was isolated from the hot spring of Pharaoh's Bath, Sinai, Egypt. The isolate produced amylase, cellulase, and caseinase and was identified by 16S rRNA gene sequencing as Parageobacillus thermoglucosidasius Pharon1 (MG965879). A growth medium containing 1% soluble starch was found to optimize the amylase production. Dinitrosalycalic acid method (DNS) was used to estimate the amount of reducing sugar produced. Statistical full factorial and response surface designs were employed to optimize physical variables affecting the α-amylase production and determine the significant interactions of the studied variables during the fermentation process. According to the results obtained by the response optimizer, the maximum amylase activity reached 76.07 U/mL/ min at 54.1°C, pH 5.6 after 98.5 h incubation under aerobic conditions. Moreover, the produced enzyme was thermostable and retained most of its activity when exposed to a high temperature of 100°C for 120 min. Maximum enzyme activity was attained when the enzyme was incubated at 70°C for 30 min. CONCLUSIONS This is the first report of the production of thermostable α-amylase by the potent thermophilic Parageobacillus thermoglucosidasius. The enzyme endured extreme conditions of temperature and pH which are important criteria for commercial and industrial applications.
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Affiliation(s)
- Ali M Saeed
- Department of Microbiology, Faculty of Science, Ain Shams University, Cairo, Egypt.
| | - Einas H El-Shatoury
- Department of Microbiology, Faculty of Science, Ain Shams University, Cairo, Egypt
| | - Hayam A E Sayed
- Department of Microbiology, Faculty of Science, Ain Shams University, Cairo, Egypt
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Huang J, Zhuo Y, Lu J, Lai Q, Zhang Y. Bacillus cereus liquid fertilizer was produced from Agaricus bisporus industrial wastewater. J Biotechnol 2021; 327:74-85. [PMID: 33440221 DOI: 10.1016/j.jbiotec.2021.01.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2020] [Revised: 12/24/2020] [Accepted: 01/01/2021] [Indexed: 10/22/2022]
Abstract
During the Agaricus bisporus canning processes, a large number of water-soluble elements were dissolved into the processing hot water. This study was conducted to use the industrial wastewater of A. bisporus to prepare agricultural microbial fertilizer. In the work, the influence of 6 different liquid fermentation factors on the total biomass of living Bacillus cereus was evaluated with the one-factor-at-a-time method and the Plackett-Burman design. The total biomass of living B. cereus was most influenced by fermentation temperature, shaking speed, and inoculation volume, which were identified as the most critical independent variables for the B. cereus biomass. The approximate ranges of optimal fermentation conditions for the three key factors were identified by the path of steepest ascent. The center point of these factors were 24 ℃ of temperature, 250 rpm of shaking speed and 12 % inoculum amount, respectively. The Box-Behnken design was applied to derive a statistical model for optimizing the three fermentation factors for B. cereus biomass. After further optimizations based on statistical predictions, the optimum fermentation parameters for B. cereus cultured in the A. bisporus industrial wastewater were fermentation temperature of 24.8 °C, shaking speed of 234 rpm, inoculum dose of 12.2 % (v:v, %), industrial wastewater concentration of 4%, initial pH values of 6.5, loading liquid of 60 mL/250 mL, and culture time of 24 h. Culturing with the optimal fermentation conditions resulted in the biomass of B. cereus of 1.35 ± 0.02 × 109 Obj/mL (N = 3), which was consistent with the predicted values (1.32 × 109 Obj/mL) predicted by the corresponding regression models (p < 0.05), and more, was also far higher than that of the standard of agricultural bacterial fertilizers in People's Republic of China. Further, the results of field trial indicated that the of B. cereus liquid fertilizer can remarkably enhance the yield of Brassica chinensis L. It is practicable to make use of the industrial wastewater of A. bisporus to prepare the microbial fertilizer.
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Affiliation(s)
- Jiafu Huang
- Engineering Technological Center of Mushroom Industry, Minnan Normal University, Zhangzhou, Fujian, 363000, China; Collaborative Innovation Center of Mushroom Health Industry, Minnan Normal University, Zhangzhou, Fujian, 363000, China; School of Life Sciences & Biotechnology College, Minnan Normal University, Zhangzhou, Fujian, 363000, China.
| | - Yizhen Zhuo
- Zhangzhou No.3 Middle School, Zhangzhou, Fujian, 363000, China
| | - Jinqiu Lu
- School of Life Sciences & Biotechnology College, Minnan Normal University, Zhangzhou, Fujian, 363000, China
| | - Qingyu Lai
- School of Life Sciences & Biotechnology College, Minnan Normal University, Zhangzhou, Fujian, 363000, China
| | - Yawen Zhang
- School of Life Sciences & Biotechnology College, Minnan Normal University, Zhangzhou, Fujian, 363000, China
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