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Bélanger JG, Copley TR, Hoyos-Villegas V, Charron JB, O'Donoughue L. A comprehensive review of in planta stable transformation strategies. PLANT METHODS 2024; 20:79. [PMID: 38822403 PMCID: PMC11140912 DOI: 10.1186/s13007-024-01200-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Accepted: 05/01/2024] [Indexed: 06/03/2024]
Abstract
Plant transformation remains a major bottleneck to the improvement of plant science, both on fundamental and practical levels. The recalcitrant nature of most commercial and minor crops to genetic transformation slows scientific progress for a large range of crops that are essential for food security on a global scale. Over the years, novel stable transformation strategies loosely grouped under the term "in planta" have been proposed and validated in a large number of model (e.g. Arabidopsis and rice), major (e.g. wheat and soybean) and minor (e.g. chickpea and lablab bean) species. The in planta approach is revolutionary as it is considered genotype-independent, technically simple (i.e. devoid of or with minimal tissue culture steps), affordable, and easy to implement in a broad range of experimental settings. In this article, we reviewed and categorized over 300 research articles, patents, theses, and videos demonstrating the applicability of different in planta transformation strategies in 105 different genera across 139 plant species. To support this review process, we propose a classification system for the in planta techniques based on five categories and a new nomenclature for more than 30 different in planta techniques. In complement to this, we clarified some grey areas regarding the in planta conceptual framework and provided insights regarding the past, current, and future scientific impacts of these techniques. To support the diffusion of this concept across the community, this review article will serve as an introductory point for an online compendium about in planta transformation strategies that will be available to all scientists. By expanding our knowledge about in planta transformation, we can find innovative approaches to unlock the full potential of plants, support the growth of scientific knowledge, and stimulate an equitable development of plant research in all countries and institutions.
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Affiliation(s)
- Jérôme Gélinas Bélanger
- Centre de recherche sur les grains (CÉROM) Inc., 740 Chemin Trudeau, St-Mathieu-de-Beloeil, Québec, J3G 0E2, Canada.
- Department of Plant Science, McGill University, 21111 Lakeshore Road, St-Mathieu-de-Beloeil, Montréal, Québec, H9X 3V9, Canada.
| | - Tanya Rose Copley
- Centre de recherche sur les grains (CÉROM) Inc., 740 Chemin Trudeau, St-Mathieu-de-Beloeil, Québec, J3G 0E2, Canada
| | - Valerio Hoyos-Villegas
- Department of Plant Science, McGill University, 21111 Lakeshore Road, St-Mathieu-de-Beloeil, Montréal, Québec, H9X 3V9, Canada
| | - Jean-Benoit Charron
- Department of Plant Science, McGill University, 21111 Lakeshore Road, St-Mathieu-de-Beloeil, Montréal, Québec, H9X 3V9, Canada
| | - Louise O'Donoughue
- Centre de recherche sur les grains (CÉROM) Inc., 740 Chemin Trudeau, St-Mathieu-de-Beloeil, Québec, J3G 0E2, Canada.
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Biondi F, Santos GM, Rodríguez PR, Sosa PA. Longevity Estimates of Canary Palms and Dragon Trees via Radiocarbon Dating: Initial Results. PLANTS (BASEL, SWITZERLAND) 2023; 13:45. [PMID: 38202353 PMCID: PMC10780642 DOI: 10.3390/plants13010045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 12/20/2023] [Accepted: 12/20/2023] [Indexed: 01/12/2024]
Abstract
Correctly estimating the maximum lifespan of plant species is a necessary component of demographic and life-history studies, which, in turn, are needed for understanding climatic impacts. Arboreal monocotyledons, which can grow to >30 m in height and >5 m in trunk perimeter, are difficult to age because they do not undergo seasonal dormancy; hence, their longevity has been estimated using various size-related methods. In this study, we tested radiocarbon (14C) dating with Accelerator Mass Spectrometry (AMS) as an additional tool for determining the age of two iconic monocotyledons: the Canary Island palm and the dragon tree. A total of 25 samples were collected from the basal stem of four palms and five dragon trees on Gran Canaria and Tenerife and then processed using the most advanced 14C-AMS analysis available. Calibration curves provided by the "IntCal group" were used to determine the oldest possible age of each sample, and 16 of them were found to be "modern", i.e., formed after the 1950s. Nine samples that were either collected from exterior, but lignified, palm tissues or from interior, and lignified, dragon tree tissues suggested ages > 300 years. Given the constant improvement of 14C-AMS tools, they can contribute to the further refinement of existing scientific knowledge on Macaronesian charismatic megaflora.
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Affiliation(s)
- Franco Biondi
- DendroLab, Department of Natural Resources and Environmental Science, University of Nevada, Reno, NV 89557, USA
| | - Guaciara M. Santos
- Department of Earth System Science, University of California Irvine, Irvine, CA 92697, USA;
| | - Priscila Rodríguez Rodríguez
- Instituto Universitario de Estudios Ambientales y Recursos Naturales (IUNAT), Universidad de las Palmas de Gran Canaria, 35017 Las Palmas de Gran Canaria, Spain; (P.R.R.); (P.A.S.)
| | - Pedro A. Sosa
- Instituto Universitario de Estudios Ambientales y Recursos Naturales (IUNAT), Universidad de las Palmas de Gran Canaria, 35017 Las Palmas de Gran Canaria, Spain; (P.R.R.); (P.A.S.)
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Kuznetsova K, Efremova E, Dodueva I, Lebedeva M, Lutova L. Functional Modules in the Meristems: "Tinkering" in Action. PLANTS (BASEL, SWITZERLAND) 2023; 12:3661. [PMID: 37896124 PMCID: PMC10610496 DOI: 10.3390/plants12203661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 10/13/2023] [Accepted: 10/16/2023] [Indexed: 10/29/2023]
Abstract
BACKGROUND A feature of higher plants is the modular principle of body organisation. One of these conservative morphological modules that regulate plant growth, histogenesis and organogenesis is meristems-structures that contain pools of stem cells and are generally organised according to a common principle. Basic content: The development of meristems is under the regulation of molecular modules that contain conservative interacting components and modulate the expression of target genes depending on the developmental context. In this review, we focus on two molecular modules that act in different types of meristems. The WOX-CLAVATA module, which includes the peptide ligand, its receptor and the target transcription factor, is responsible for the formation and control of the activity of all meristem types studied, but it has its own peculiarities in different meristems. Another regulatory module is the so-called florigen-activated complex, which is responsible for the phase transition in the shoot vegetative meristem (e.g., from the vegetative shoot apical meristem to the inflorescence meristem). CONCLUSIONS The review considers the composition and functions of these two functional modules in different developmental programmes, as well as their appearance, evolution and use in plant breeding.
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Affiliation(s)
| | | | - Irina Dodueva
- Department of Genetics and Biotechnology, Saint Petersburg State University, Universitetskaya Emb. 7/9, 199034 Saint Petersburg, Russia; (K.K.); (E.E.); (M.L.); (L.L.)
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Tulik M, Jura-Morawiec J. An arrangement of secretory cells involved in the formation and storage of resin in tracheid-based secondary xylem of arborescent plants. FRONTIERS IN PLANT SCIENCE 2023; 14:1268643. [PMID: 37731990 PMCID: PMC10508844 DOI: 10.3389/fpls.2023.1268643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 08/21/2023] [Indexed: 09/22/2023]
Abstract
The evolution of the vascular system has led to the formation of conducting and supporting elements and those that are involved in the mechanisms of storage and defense against the influence of biotic and abiotic factors. In the case of the latter, the general evolutionary trend was probably related to a change in their arrangement, i.e. from cells scattered throughout the tissue to cells organized into ducts or cavities. These cells, regardless of whether they occur alone or in a cellular structure, are an important defense element of trees, having the ability to synthesize, among others, natural resins. In the tracheid-based secondary xylem of gymnosperms, the resin ducts, which consist of secretory cells, are of two types: axial, interspersed between the tracheids, and radial, carried in some rays. They are interconnected and form a continuous system. On the other hand, in the tracheid-based secondary xylem of monocotyledons, the resin-producing secretory cells do not form specialized structures. This review summarizes knowledge on the morpho-anatomical features of various types of resin-releasing secretory cells in relation to their: (i) location, (ii) origin, (iii) mechanism of formation, (iv) and ecological significance.
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Affiliation(s)
- Mirela Tulik
- Department of Forest Botany, Institute of Forest Sciences, Warsaw University of Life Sciences, Warsaw, Poland
| | - Joanna Jura-Morawiec
- Polish Academy of Sciences Botanical Garden - Centre for Biological Diversity Conservation in Powsin, Warsaw, Poland
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Tulik M, Wojtan R, Jura-Morawiec J. Theoretical considerations regarding the functional anatomical traits of primary and secondary xylem in dragon tree trunk using the example of Dracaena draco. PLANTA 2022; 256:52. [PMID: 35906444 PMCID: PMC9338164 DOI: 10.1007/s00425-022-03966-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 07/21/2022] [Indexed: 06/15/2023]
Abstract
In Dracaena draco trunks, the primary and secondary xylem conduits co-function. Both are resistant to embolism; however, secondary conduits are mainly involved in mechanical support. Monocotyledonous dragon trees (Dracaena spp., Asparagaceae) possess in their trunks both primary and secondary xylem elements, organized into vascular bundles, that for dozens of years co-function and enable the plant to transport water efficiently as well as provide mechanical support. Here, based on the modified Hagen-Poiseuille's formula, we examined the functional anatomical xylem traits of the trunk in two young D. draco individuals to compare their function in both primary and secondary growth. We provided analyses of the: (i) conduits surface sculpture and their cell walls thickness, (ii) conduit diameter and frequency, (iii) hydraulically weighted diameter, (iv) theoretical hydraulic conductivity, (v) area-weighted mean conduit diameter, as well as (vi) vulnerability index. The conduits in primary growth, located in the central part of the trunk, were loosely arranged, had thinner cell walls, larger mean hydraulically weighted diameter, and significantly larger value of the theoretical hydraulic conductivity than conduits in secondary growth, which form a rigid cylinder near the trunk surface. Based on the vulnerability index, both primary and secondary conduits are resistant to embolism. Taking into account the distribution within a trunk, the secondary growth conduits seems to be mainly involved in mechanical support as they are twisted, form structures similar to sailing ropes and have thick cell walls, and a peripheral localization. D. draco has been adapted to an environment with water deficit by distinctive, spatial separation of the xylem elements fulfilling supportive and conductive functions.
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Affiliation(s)
- Mirela Tulik
- Department of Forest Botany, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Rafał Wojtan
- Department of Dendrometry and Forest Productivity, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Joanna Jura-Morawiec
- Polish Academy of Sciences Botanical Garden - CBDC in Powsin, Prawdziwka 2, 02-973 Warsaw, Poland
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Transcriptomics and Metabolomics Analyses Reveal Defensive Responses and Flavonoid Biosynthesis of Dracaena cochinchinensis (Lour.) S. C. Chen under Wound Stress in Natural Conditions. Molecules 2022; 27:molecules27144514. [PMID: 35889387 PMCID: PMC9320494 DOI: 10.3390/molecules27144514] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/09/2022] [Accepted: 07/09/2022] [Indexed: 12/27/2022] Open
Abstract
Dracaena cochinchinensis has special defensive reactions against wound stress. Under wound stress, D. cochinchinensis generates a resin that is an important medicine known as dragon’s blood. However, the molecular mechanism underlying the defensive reactions is unclear. Metabolomics and transcriptomics analyses were performed on stems of D. cochinchinensis at different timepoints from the short term to the long term after wounding. According to the 378 identified compounds, wound-induced secondary metabolic processes exhibited three-phase characteristics: short term (0–5 days), middle term (10 days–3 months), and long term (6–17 months). The wound-induced transcriptome profile exhibited characteristics of four stages: within 24 h, 1–5 days, 10–30 days, and long term. The metabolic regulation in response to wound stress mainly involved the TCA cycle, glycolysis, starch and sucrose metabolism, phenylalanine biosynthesis, and flavonoid biosynthesis, along with some signal transduction pathways, which were all well connected. Flavonoid biosynthesis and modification were the main reactions against wound stress, mainly comprising 109 flavonoid metabolites and 93 wound-induced genes. A group of 21 genes encoding CHS, CHI, DFR, PPO, OMT, LAR, GST, and MYBs were closely related to loureirin B and loureirin C. Wound-induced responses at the metabolome and transcriptome level exhibited phase characteristics. Complex responses containing primary metabolism and flavonoid biosynthesis are involved in the defense mechanism against wound stress in natural conditions, and flavonoid biosynthesis and modification are the main strategies of D. cochinchinensis in the long-term responses to wound stress.
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Onyenedum JG, Pace MR. The role of ontogeny in wood diversity and evolution. AMERICAN JOURNAL OF BOTANY 2021; 108:2331-2355. [PMID: 34761812 DOI: 10.1002/ajb2.1801] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 09/16/2021] [Indexed: 06/13/2023]
Abstract
Evolutionary developmental biology (evo-devo) explores the link between developmental patterning and phenotypic change through evolutionary time. In this review, we highlight the scientific advancements in understanding xylem evolution afforded by the evo-devo approach, opportunities for further engagement, and future research directions for the field. We review evidence that (1) heterochrony-the change in rate and timing of developmental events, (2) homeosis-the ontogenetic replacement of features, (3) heterometry-the change in quantity of a feature, (4) exaptation-the co-opting and repurposing of an ancestral feature, (5) the interplay between developmental and capacity constraints, and (6) novelty-the emergence of a novel feature, have all contributed to generating the diversity of woods. We present opportunities for future research engagement, which combine wood ontogeny within the context of robust phylogenetic hypotheses, and molecular biology.
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Affiliation(s)
- Joyce G Onyenedum
- School of Integrative Plant Sciences and L. H. Bailey Hortorium, Cornell University, Ithaca, New York, 14853, USA
| | - Marcelo R Pace
- Department of Botany, Instituto de Biología, Universidad Nacional Autónoma de México, Tercer Circuito s/n de Ciudad Universitaria, Mexico City, 04510, Mexico
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Meristematic Connectome: A Cellular Coordinator of Plant Responses to Environmental Signals? Cells 2021; 10:cells10102544. [PMID: 34685524 PMCID: PMC8533771 DOI: 10.3390/cells10102544] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 09/18/2021] [Accepted: 09/22/2021] [Indexed: 11/30/2022] Open
Abstract
Mechanical stress in tree roots induces the production of reaction wood (RW) and the formation of new branch roots, both functioning to avoid anchorage failure and limb damage. The vascular cambium (VC) is the factor responsible for the onset of these responses as shown by their occurrence when all primary tissues and the root tips are removed. The data presented confirm that the VC is able to evaluate both the direction and magnitude of the mechanical forces experienced before coordinating the most fitting responses along the root axis whenever and wherever these are necessary. The coordination of these responses requires intense crosstalk between meristematic cells of the VC which may be very distant from the place where the mechanical stress is first detected. Signaling could be facilitated through plasmodesmata between meristematic cells. The mechanism of RW production also seems to be well conserved in the stem and this fact suggests that the VC could behave as a single structure spread along the plant body axis as a means to control the relationship between the plant and its environment. The observation that there are numerous morphological and functional similarities between different meristems and that some important regulatory mechanisms of meristem activity, such as homeostasis, are common to several meristems, supports the hypothesis that not only the VC but all apical, primary and secondary meristems present in the plant body behave as a single interconnected structure. We propose to name this structure “meristematic connectome” given the possibility that the sequence of meristems from root apex to shoot apex could represent a pluricellular network that facilitates long-distance signaling in the plant body. The possibility that the “meristematic connectome” could act as a single structure active in adjusting the plant body to its surrounding environment throughout the life of a plant is now proposed.
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