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Chaudhary A, Kumar K, Singh VK, Rai S, Kumar V, Tungala K, Das A, Jana T. Poly(acrylamide)-co-poly(hydroxyethyl)methacrylate-co-poly(cyclohexyl methacrylate) hydrogel platform for stability, storage and biocatalytic applications of urease. Int J Biol Macromol 2024; 265:131039. [PMID: 38518938 DOI: 10.1016/j.ijbiomac.2024.131039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 03/18/2024] [Accepted: 03/19/2024] [Indexed: 03/24/2024]
Abstract
In our present work, an explicit crosslinked thermo-responsive hydrogel platform has been developed, by using polyacrylamide (PAAm), poly(2-hydroxyethyl methacrylate) (PHEMA) and poly(cyclohexyl methacrylate) (PCHMA), and then coupled with urease to yield bioconjugates (BCs). Synergic effect of these polymer units provides thermoresponsive nature, optimum crosslinking with desired swelling behaviour, and stability and improved catalytic to Urease in the resultant BCs. Synthesis of the terpolymer has been achieved by employing HEMA (monomer as well as crosslinker), instead of using the conventional crosslinkers, through free radical solution polymerization technique. Various grades of TRPUBs have been fabricated by varying HEMA and CHMA contents while keeping fixed amounts of AAm. Further, the structural analysis of BCs has been done by fourier transform infra-red spectroscopic study and their thermal stabilities have been studied by thermogravimetric analysis. Urea present in TRPUBs has beenanalysed for its hydrolysis atdifferent temperatures viz., 25 °C, 45 °C and 70 °C. Further, the effect of crosslinking, temperature and reaction time on catalytic activities of TRPUBs has been studied. TRPUBs grades have showna maximum swelling capacity up to 5200 %; excellent catalytic activity even at 70 °C; and 85 % activity retention after 18 days storage in buffer medium.
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Affiliation(s)
- Aradhana Chaudhary
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur 273010, Uttar Pradesh, India
| | - Krishna Kumar
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur 273010, Uttar Pradesh, India; Department of Chemistry, School of Basic & Applied Science, Harcourt Butler Technical University, Kanpur 208002, Uttar Pradesh, India.
| | - Vinai K Singh
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur 273010, Uttar Pradesh, India
| | - Shailja Rai
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur 273010, Uttar Pradesh, India
| | - Vinod Kumar
- Department of Chemistry, Babu Shivnath Agrawal College, Mathura 281004, Uttar Pradesh, India
| | - Kranthikumar Tungala
- Department of Chemistry, Ewing Christian College, Allahabad University, Prayagraj 211003, Uttar Pradesh, India
| | - Anupam Das
- School of Chemistry, University of Hyderabad, Gachibowli-500046, Hyderabad, Telangana State, India
| | - Tushar Jana
- School of Chemistry, University of Hyderabad, Gachibowli-500046, Hyderabad, Telangana State, India
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de Jesus CG, da Rocha Rodrigues R, Caseli L, Péres LO. Conducting polymers modulating the catalytic activity of urease in thin composite films. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.130136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Yadav N, Kumar K, Singh VK, Rai S, Blahatia K, Das A, Jana T. Newly designed acrylamide derivative-based pH-responsive hydrogel-urease bioconjugates: synthesis and catalytic urea hydrolysis. SOFT MATTER 2022; 18:8647-8655. [PMID: 36349658 DOI: 10.1039/d2sm00958g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Jack bean urease, the first nickel metalloenzyme, and crystallized enzymes have historical significance due to their several applications in the biomedical and other fields. For the first time, cross-linker free pH-responsive hydrogel-urease bioconjugates have been reported. Without the use of divinyl benzene or divinyl acrylamide derivatives, urease was immobilized inside the hydrogel matrix and various grades of bioconjugates were synthesized. The hydrogel-urease bioconjugate exhibits excellent swelling-deswelling and pH-responsive characteristics without affecting the urease enzyme. The pH-responsive bioconjugates were characterized by FT-IR, powder XRD, SEM, TGA, and UV-vis spectroscopy. Urea hydrolysis and enzyme affinity have been investigated at pH 4, pH 7, and pH 11 using bioconjugates and free urease. At basic pH, BCs showed excellent enzyme activity. In summary, this technique is effective for stabilizing biomacromolecules at different pHs for a variety of real applications.
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Affiliation(s)
- Nisha Yadav
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur-273010, Uttar Pradesh, India.
| | - Krishna Kumar
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur-273010, Uttar Pradesh, India.
| | - V K Singh
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur-273010, Uttar Pradesh, India.
| | - Shailja Rai
- Department of Chemistry and Environmental Science, Madan Mohan Malaviya University of Technology, Gorakhpur-273010, Uttar Pradesh, India.
| | - Kunal Blahatia
- Department of Chemical Engineering, India Institute of Technology Delhi, New Delhi-110016, India
| | - Anupam Das
- School of Chemistry, University of Hyderabad, Gachibowli-500046, Hyderabad, Telangana State, India
| | - Tushar Jana
- School of Chemistry, University of Hyderabad, Gachibowli-500046, Hyderabad, Telangana State, India
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Chen Z, Zhao Y, Liu Y. Advanced Strategies in Enzyme Activity Regulation for Biomedical Applications. Chembiochem 2022; 23:e202200358. [PMID: 35896516 DOI: 10.1002/cbic.202200358] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Revised: 07/25/2022] [Indexed: 11/06/2022]
Abstract
Enzymes are important macromolecular biocatalysts that accelerate chemical and biochemical reactions in living organisms. Most human diseases are related to alterations in enzyme activity. Moreover, enzymes are potential therapeutic tools for treating different diseases, such as cancer, infections, and cardiovascular and cerebrovascular diseases. Precise remote enzyme activity regulation provides new opportunities to combat diseases. This review summarizes recent advances in the field of enzyme activity regulation, including reversible and irreversible regulation. It also discusses the mechanisms and approaches for on-demand control of these activities. Furthermore, a range of stimulus-responsive inhibitors, polymers, and nanoparticles for regulating enzyme activity and their prospective biomedical applications are summarized. Finally, the current challenges and future perspectives on enzyme activity regulation are discussed.
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Affiliation(s)
- Zihan Chen
- Nankai University, College of Chemistry, Tianjin, CHINA
| | - Yu Zhao
- Nankai University, College of Chemistry, Tianjin, CHINA
| | - Yang Liu
- Nankai University, College of Chemistry, 94 Weijin Rd., Mengminwei Bldg 412, 300071, Tianjin, CHINA
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Salehipour M, Rezaei S, Yazdani M, Mogharabi-Manzari M. Recent advances in preparation of polymer hydrogel composites and their applications in enzyme immobilization. Polym Bull (Berl) 2022. [DOI: 10.1007/s00289-022-04370-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Kappauf K, Majstorovic N, Agarwal S, Rother D, Claaßen C. Modulation of Transaminase Activity by Encapsulation in Temperature-Sensitive Poly(N-acryloyl glycinamide) Hydrogels. Chembiochem 2021; 22:3452-3461. [PMID: 34596326 PMCID: PMC9293319 DOI: 10.1002/cbic.202100427] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 09/30/2021] [Indexed: 01/26/2023]
Abstract
Smart hydrogels hold much potential for biocatalysis, not only for the immobilization of enzymes, but also for the control of enzyme activity. We investigated upper critical solution temperature‐type poly N‐acryloyl glycinamide (pNAGA) hydrogels as a smart matrix for the amine transaminase from Bacillus megaterium (BmTA). Physical entrapment of BmTA in pNAGA hydrogels results in high immobilization efficiency (>89 %) and high activity (97 %). The temperature‐sensitiveness of pNAGA is preserved upon immobilization of BmTA and shows a gradual deswelling upon temperature reduction. While enzyme activity is mainly controlled by temperature, deactivation tended to be higher for immobilized BmTA (≈62–68 %) than for free BmTA (≈44 %), suggesting a deactivating effect due to deswelling of the pNAGA gel. Although the deactivation in response to hydrogel deswelling is not yet suitable for controlling enzyme activity sufficiently, it is nevertheless a good starting point for further optimization.
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Affiliation(s)
- Katrin Kappauf
- Institute of Bio- and Geosciences - Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Straße, 52425, Jülich, Germany.,Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Worringerweg 1, 52074, Aachen, Germany
| | - Nikola Majstorovic
- Macromolecular Chemistry, Bavarian Polymer Institute, University of Bayreuth, Universitätsstrasse 30, 95440, Bayreuth, Germany
| | - Seema Agarwal
- Macromolecular Chemistry, Bavarian Polymer Institute, University of Bayreuth, Universitätsstrasse 30, 95440, Bayreuth, Germany
| | - Dörte Rother
- Institute of Bio- and Geosciences - Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Straße, 52425, Jülich, Germany.,Aachen Biology and Biotechnology (ABBt), RWTH Aachen University, Worringerweg 1, 52074, Aachen, Germany
| | - Christiane Claaßen
- Institute of Bio- and Geosciences - Biotechnology (IBG-1), Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Straße, 52425, Jülich, Germany
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Catalytic Activity of Immobilized Chymotrypsin on Hybrid Silica-Magnetic Biocompatible Particles and Its Application in Peptide Synthesis. Appl Biochem Biotechnol 2019; 190:1224-1241. [DOI: 10.1007/s12010-019-03158-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Accepted: 10/23/2019] [Indexed: 02/07/2023]
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Vardar G, Attar A, Yapaoz MA. Development of urea biosensor using non-covalent complexes of urease with aldehyde derivative of PEG and analysis on serum samples. Prep Biochem Biotechnol 2019; 49:868-875. [PMID: 31219372 DOI: 10.1080/10826068.2019.1630650] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
Non-covalent complexes of urease/polyethylene glycol (PEG)-aldehyde were synthesized using regular molar ratios of urease and PEG-aldehyde at room temperature. The physical properties of the non-covalent complexes were analyzed in order to investigate the impact of coupling ratio, temperature, pH, storage stability, and thermal stability. Urease activity was analyzed by UV-Vis spectrophotometer at 630 nm. The results showed that the strongest thermal resistance was obtained using nU/nPEG:1/1 (mg/mL) complex within all molar ratios tested. The enzymatic activity of nU/nPEG:1/1 complex doubled the activity of the free enzyme. Therefore, this complex was chosen to be used in the analyses. When coupled with PEG-aldehyde, urease exhibited improved activity between pH 4.0-9.0 and the optimum pH was found to be 7.0. The thermal inactivation results of the complex demonstrated that higher activity remained (40%) when compared with the free enzyme (10%) at 60 °C. The storage stability of the non-covalent complex was 4 weeks which was greater than the storage stability of the free enzyme. A kinetic model was suggested in order to reveal the mechanism of enzymatic conversion. Potentiometric urea biosensor was prepared using two different membranes: carboxylated poly vinyl chloride (PVC) and palmitic acid containing PVC. The potentiometric responses of both sensors were tested against pH and temperature and the best results were obtained at pH 7.0 and 20-30 °C. Also, selectivity of the suggested biosensors toward Na+, Li+ Ca2+, and K+ ions was evaluated and the reproducibility responses of the urea biosensors were measured with acceptable results.
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Affiliation(s)
- Gokay Vardar
- Department of Chemistry, Faculty of Science and Letters, Yildiz Technical University , Istanbul , Turkey
| | - Azade Attar
- Department of Bioengineering, Faculty of Chemical & Metallurgical Engineering, Yildiz Technical University , Istanbul , Turkey
| | - Melda Altikatoglu Yapaoz
- Department of Chemistry, Faculty of Science and Letters, Yildiz Technical University , Istanbul , Turkey
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Claaßen C, Gerlach T, Rother D. Stimulus-Responsive Regulation of Enzyme Activity for One-Step and Multi-Step Syntheses. Adv Synth Catal 2019; 361:2387-2401. [PMID: 31244574 PMCID: PMC6582597 DOI: 10.1002/adsc.201900169] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Revised: 03/25/2019] [Indexed: 01/20/2023]
Abstract
Multi-step biocatalytic reactions have gained increasing importance in recent years because the combination of different enzymes enables the synthesis of a broad variety of industrially relevant products. However, the more enzymes combined, the more crucial it is to avoid cross-reactivity in these cascade reactions and thus achieve high product yields and high purities. The selective control of enzyme activity, i.e., remote on-/off-switching of enzymes, might be a suitable tool to avoid the formation of unwanted by-products in multi-enzyme reactions. This review compiles a range of methods that are known to modulate enzyme activity in a stimulus-responsive manner. It focuses predominantly on in vitro systems and is subdivided into reversible and irreversible enzyme activity control. Furthermore, a discussion section provides indications as to which factors should be considered when designing and choosing activity control systems for biocatalysis. Finally, an outlook is given regarding the future prospects of the field.
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Affiliation(s)
- Christiane Claaßen
- Institute of Bio- and Geosciences – Biotechnology (IBG-1)Forschungszentrum Jülich GmbH52425JülichGermany
| | - Tim Gerlach
- Institute of Bio- and Geosciences – Biotechnology (IBG-1)Forschungszentrum Jülich GmbH52425JülichGermany
- Aachen Biology and Biotechnology (ABBt)RWTH Aachen University52074AachenGermany
| | - Dörte Rother
- Institute of Bio- and Geosciences – Biotechnology (IBG-1)Forschungszentrum Jülich GmbH52425JülichGermany
- Aachen Biology and Biotechnology (ABBt)RWTH Aachen University52074AachenGermany
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Spectroscopic and mechanistic analysis of the interaction between Jack bean urease and polypseudorotaxane fabricated with bis-thiolated poly(ethylene glycol) and α-cyclodextrin. Colloids Surf B Biointerfaces 2019; 176:276-287. [PMID: 30623815 DOI: 10.1016/j.colsurfb.2019.01.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2018] [Revised: 12/23/2018] [Accepted: 01/02/2019] [Indexed: 11/20/2022]
Abstract
Self-assembled polypseudorotaxanes (PPRXs) fabricated with α-cyclodextrin and poly(ethylene glycol) (PEG) or its thiolated derivatives were candidate functional materials for enzyme soft-immobilization, encapsulation and controlled-release. The study of their interaction with Jack bean urease (JBU) indicated that they inconspicuously influenced the activity and stability of JBU during long storage, up to 30 days. The macro-species were inaccessible to JBU's active site and the steric effect might play a significant role in the stabilization of JBU, when compared with the small-molecular sulfhydryl inhibitor thioglycolic acid. Circular dichroism and fluorescence spectra analyses revealed that thiolated PEG400-(SH)2 and its assembly PPRX400(SH) brought in perturbations to certain α-helical or β-sheet domains of JBU, making JBU's conformation more flexible. The resulting partial unfolding of domains exposed several hydrophobic clusters and varied JBU's surface hydrophobicity. It also rendered the chromophores more hydrophilic and more bared to the polar environment, leading to the typical bathochromic-shift and quenching in intrinsic and synchronous fluorescence spectra. Moreover, the surface hydrophobicity profile of JBU was depicted by fluorescent probe monitoring and the unique "hydrophobic cave" motif was proposed by analyzing JBU's structural data from the Protein Data Bank. It should be pointed out that conformational variations mainly occurred at the surface region of JBU, while the buried active bi-nickel center was not markedly influenced by the macro-species. The results demonstrated that the PPRXs might act as a proper carrier for JBU encapsulation or soft-immobilization.
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Goh K, Li H, Lam K. Urease catalytic behaviors induced by both urea and salt concentrations in ion-exchange hydrogels as dialysis membranes. REACT FUNCT POLYM 2018. [DOI: 10.1016/j.reactfunctpolym.2018.03.014] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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Shakya AK, Nandakumar KS. An update on smart biocatalysts for industrial and biomedical applications. J R Soc Interface 2018; 15:20180062. [PMID: 29491182 PMCID: PMC5832743 DOI: 10.1098/rsif.2018.0062] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Accepted: 02/08/2018] [Indexed: 12/22/2022] Open
Abstract
Recently, smart biocatalysts, where enzymes are conjugated to stimuli-responsive (smart) polymers, have gained significant attention. Based on the presence or absence of external stimuli, the polymer attached to the enzyme changes its conformation to protect the enzyme from the external environment and regulate the enzyme activity, thus acting as a molecular switch. Owing to this behaviour, smart biocatalysts can be separated easily from a reaction mixture and re-used several times. Several such smart polymer-based biocatalysts have been developed for industrial and biomedical applications. In addition, they have been used in biosensors, biometrics and nano-electronic devices. This review article covers recent advances in developing different kinds of stimuli-responsive enzyme bioconjugates, including conjugation strategies, and their applications.
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Affiliation(s)
| | - Kutty Selva Nandakumar
- School of Pharmaceutical Sciences, Southern Medical University, Guangzhou, People's Republic of China
- Department of Medical Biophysics and Biochemistry, Karolinska Institute, Stockholm, Sweden
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Streptavidin-hydrogel prepared by sortase A-assisted click chemistry for enzyme immobilization on an electrode. Biosens Bioelectron 2018; 99:56-61. [DOI: 10.1016/j.bios.2017.07.044] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Revised: 07/14/2017] [Accepted: 07/18/2017] [Indexed: 02/08/2023]
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Bayramoglu G, Arica MY, Genc A, Ozalp VC, Ince A, Bicak N. A facile and efficient method of enzyme immobilization on silica particles via Michael acceptor film coatings: immobilized catalase in a plug flow reactor. Bioprocess Biosyst Eng 2016; 39:871-81. [DOI: 10.1007/s00449-016-1566-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2015] [Accepted: 02/04/2016] [Indexed: 01/29/2023]
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