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For: Liu T, Zheng X, Wang J. Prediction of protein structural class using a complexity-based distance measure. Amino Acids 2009;38:721-8. [PMID: 19330425 DOI: 10.1007/s00726-009-0276-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2008] [Accepted: 03/11/2009] [Indexed: 11/30/2022]
Number Cited by Other Article(s)
1
Bankapur S, Patil N. Enhanced Protein Structural Class Prediction Using Effective Feature Modeling and Ensemble of Classifiers. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2021;18:2409-2419. [PMID: 32149653 DOI: 10.1109/tcbb.2020.2979430] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
2
Khalatbari L, Kangavari M, Hosseini S, Yin H, Cheung NM. MCP: A multi-component learning machine to predict protein secondary structure. Comput Biol Med 2019;110:144-155. [DOI: 10.1016/j.compbiomed.2019.04.040] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Revised: 04/23/2019] [Accepted: 04/29/2019] [Indexed: 11/26/2022]
3
Liang Y, Zhang S. Predict protein structural class by incorporating two different modes of evolutionary information into Chou's general pseudo amino acid composition. J Mol Graph Model 2017;78:110-117. [DOI: 10.1016/j.jmgm.2017.10.003] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Revised: 10/03/2017] [Accepted: 10/03/2017] [Indexed: 11/27/2022]
4
Li Z, Wang J, Zhang S, Zhang Q, Wu W. A new hybrid coding for protein secondary structure prediction based on primary structure similarity. Gene 2017;618:8-13. [DOI: 10.1016/j.gene.2017.03.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Revised: 02/02/2017] [Accepted: 03/15/2017] [Indexed: 11/16/2022]
5
Kavianpour H, Vasighi M. Structural classification of proteins using texture descriptors extracted from the cellular automata image. Amino Acids 2016;49:261-271. [DOI: 10.1007/s00726-016-2354-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Accepted: 10/18/2016] [Indexed: 12/12/2022]
6
Kong L, Kong L, Jing R. Improving the Prediction of Protein Structural Class for Low-Similarity Sequences by Incorporating Evolutionaryand Structural Information. JOURNAL OF ADVANCED COMPUTATIONAL INTELLIGENCE AND INTELLIGENT INFORMATICS 2016. [DOI: 10.20965/jaciii.2016.p0402] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
7
Fan M, Zheng B, Li L. A novel Multi-Agent Ada-Boost algorithm for predicting protein structural class with the information of protein secondary structure. J Bioinform Comput Biol 2015;13:1550022. [DOI: 10.1142/s0219720015500225] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
8
Prediction of antimicrobial peptides based on sequence alignment and support vector machine-pairwise algorithm utilizing LZ-complexity. BIOMED RESEARCH INTERNATIONAL 2015;2015:212715. [PMID: 25802839 PMCID: PMC4352747 DOI: 10.1155/2015/212715] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/26/2014] [Accepted: 10/14/2014] [Indexed: 01/27/2023]
9
Tan YT, Rosdi BA. FPGA-based hardware accelerator for the prediction of protein secondary class via fuzzy K-nearest neighbors with Lempel–Ziv complexity based distance measure. Neurocomputing 2015. [DOI: 10.1016/j.neucom.2014.06.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
10
Li L, Cui X, Yu S, Zhang Y, Luo Z, Yang H, Zhou Y, Zheng X. PSSP-RFE: accurate prediction of protein structural class by recursive feature extraction from PSI-BLAST profile, physical-chemical property and functional annotations. PLoS One 2014;9:e92863. [PMID: 24675610 PMCID: PMC3968047 DOI: 10.1371/journal.pone.0092863] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2013] [Accepted: 02/27/2014] [Indexed: 02/05/2023]  Open
11
Learning protein multi-view features in complex space. Amino Acids 2013;44:1365-79. [DOI: 10.1007/s00726-013-1472-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2012] [Accepted: 02/13/2013] [Indexed: 12/11/2022]
12
Han GS, Yu ZG, Anh V, Krishnajith APD, Tian YC. An ensemble method for predicting subnuclear localizations from primary protein structures. PLoS One 2013;8:e57225. [PMID: 23460833 PMCID: PMC3584121 DOI: 10.1371/journal.pone.0057225] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2012] [Accepted: 01/18/2013] [Indexed: 12/04/2022]  Open
13
The prediction of protein structural class using averaged chemical shifts. J Biomol Struct Dyn 2012;29:643-9. [DOI: 10.1080/07391102.2011.672628] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
14
Mizianty MJ, Kurgan L. Modular prediction of protein structural classes from sequences of twilight-zone identity with predicting sequences. BMC Bioinformatics 2009;10:414. [PMID: 20003388 PMCID: PMC2805645 DOI: 10.1186/1471-2105-10-414] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2009] [Accepted: 12/13/2009] [Indexed: 11/13/2022]  Open
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