1
|
Khairbek AA, Abd-Al Hakim Badawi M, Alzahrani AY, Puchta R, Thomas R. Computational study on novel RhCp X (X = CF 3, SiF 3, CCl 3, SO 3H) as promising catalysts in the [3 + 2] azide-alkyne cycloaddition reaction: insights into mechanistic pathways and reactivity. Dalton Trans 2025; 54:3383-3392. [PMID: 39835514 DOI: 10.1039/d4dt02970d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2025]
Abstract
This computational study investigated the catalytic efficiency of novel RhCpX complexes (X = CF3, SiF3, CCl3, SO3H) in [3 + 2] azide-alkyne cycloaddition reactions via density functional theory (MN12-L/Def2-SVP). Through quantum mechanical approaches, we explore the impact of different substituents on the Cp* ligand on the mechanism, selectivity, and reactivity of these Rh-based catalysts. Non-covalent interaction (NCI) and reduced density gradient (RDG) analyses, along with frontier molecular orbital (FMO) and Hirshfeld atomic charge analyses, were utilized to assess ligand stability and catalytic performance. The results show that RhCpSO3H offers the highest stability and reactivity, favoring the formation of 1,5-disubstituted triazoles. Our findings highlight the potential of these novel RhCpX complexes as effective catalysts in synthetic and pharmaceutical applications.
Collapse
Affiliation(s)
- Ali A Khairbek
- Centre of Molecular Medicine and Diagnostics (COMManD), Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai 600 077, India.
- Centre for Theoretical and Computational Chemistry, St Berchmans College (Autonomous), Changanassery, Kerala, 686101, India
| | | | - Abdullah Y Alzahrani
- Department of Chemistry, Faculty of Science and Arts, King Khalid University, Mohail Assir, Saudi Arabia
| | - Ralph Puchta
- Inorganic Chemistry, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Erlangen, Germany
- Computer Chemistry Center, Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Erlangen, Germany
- Central Institute for Scientific Computing (CISC), University of Erlangen-Nuremberg, Erlangen, Germany
| | - Renjith Thomas
- Department of Chemistry, St Berchmans College (Autonomous), Changanassery, Kerala, 686101, India.
- Centre for Theoretical and Computational Chemistry, St Berchmans College (Autonomous), Changanassery, Kerala, 686101, India
| |
Collapse
|
2
|
Khairbek AA, Badawi MAAH, Alzahrani AY, Thomas R. Assessing the catalytic potential of novel halogen substituted carbene NHC (F, Cl, Br, I) catalysts in [3 + 2] cycloaddition reactions: A computational investigation. Dalton Trans 2024; 53:16635-16646. [PMID: 39327943 DOI: 10.1039/d4dt02225d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/28/2024]
Abstract
This study investigated the catalytic behavior of NHC-X ligands (X = F, Cl, Br, I) in cycloaddition reactions, focusing on both mononuclear and binuclear pathways. Using NCI (noncovalent interaction), RDG (reduced density gradient), ELF (electron localization function), and LOL (localized orbital locus) computational analyses, the electronic interactions and stability of the ligands were examined. The results showed that NHC-Cl exhibited the least steric hindrance and strongest transition state stabilization, making it the most efficient catalyst. NHC-F also demonstrated strong stabilization, particularly in the binuclear pathway. In contrast, NHC-Br showed moderate efficiency, whereas NHC-I was the least effective owing to higher Gibbs free energy values and greater steric hindrance, especially in polar solvents such as water and acetonitrile. This study emphasizes the crucial role of solvent effects and thermodynamic factors in influencing the catalytic efficiency. These findings provide a framework for optimizing NHC-based catalysts for chemical transformations.
Collapse
Affiliation(s)
- Ali A Khairbek
- Centre of Molecular Medicine and Diagnostics (COMManD), Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai 600 077, India
- Department of Chemistry, Faculty of Science, Tishreen University, Latakia, Syrian Arab Republic.
| | | | - Abdullah Y Alzahrani
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, 23622, Saudi Arabia
| | - Renjith Thomas
- Department of Chemistry, St Berchmans College (Autonomous), Changanassery, Kerala-686101, India.
- Centre for Theoretical and Computational Chemistry, St Berchmans College (Autonomous), Changanassery, Kerala-686101, India
| |
Collapse
|
3
|
Analyzing Indole-fused benzooxazepines as inhibitors of apoptosis pathway-related proteins using multifaceted computational medicinal chemistry. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
|
4
|
Hiremath SM, Basanagouda MM, Khemalapure SS, Rayar A, Rakkasagi AM, Koppal VV, Mahesh R, Jeyaseelan SC. Structural, vibrational, fluorescence spectral features, Hirshfeld surface analysis, docking and drug likeness studies on 4-(2-bromo-4-methyl-phenoxymethyl)-6-methyl-coumarin derivative: Experimental and theoretical studies. J Photochem Photobiol A Chem 2022. [DOI: 10.1016/j.jphotochem.2022.114055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
5
|
DFT Explorations on the spectral, non-covalent interactions and the invitro analysis of a synthesized anti-bacterial nanocomposite pure hydroxyapatite. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
|
6
|
Narayan V, Pandey AK, Dwivedi A, Mwankemwa BS, Maurya A, Sharma AK, Singh V. Comprehensive quantum chemical calculations and molecular docking analysis of uracil mustard by first principle. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
|
7
|
DFT investigation of graphene quantum dot-Ixora floral natural dye (GQD-NDIX) nanocomposites as visible light harvesters in dye-sensitized solar cells. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
8
|
Electronic, spectroscopic, molecular docking and molecular dynamics studies of neutral and zwitterionic forms of 3, 4-dihydroxy-l-phenylalanine: A novel lung cancer drug. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132844] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
|