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For: Hong EH, Jeong YM, Ryu JY, Amasino RM, Noh B, Noh YS. Temporal and spatial expression patterns of nine Arabidopsis genes encoding Jumonji C-domain proteins. Mol Cells 2009;27:481-90. [PMID: 19390830 DOI: 10.1007/s10059-009-0054-7] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2009] [Accepted: 02/10/2009] [Indexed: 01/19/2023]  Open
Number Cited by Other Article(s)
1
Wang H, Yan S, Wang W, Chen Y, Hong J, He Q, Diao X, Lin Y, Chen Y, Cao Y, Guo W, Fang W. Cropformer: An interpretable deep learning framework for crop genomic prediction. PLANT COMMUNICATIONS 2025;6:101223. [PMID: 39690739 PMCID: PMC11956090 DOI: 10.1016/j.xplc.2024.101223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Revised: 10/15/2024] [Accepted: 12/12/2024] [Indexed: 12/19/2024]
2
Dong Y, Ma Y, Li Q, Cao Y, Dong D, Chen C, Zhang X, Fan Y, Jin X. Overexpression of histone demethylase gene SlJMJ18 and SlJMJ23 from tomato confers cadmium tolerance by regulating metal transport and hormone content in Arabidopsis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024;346:112169. [PMID: 38914158 DOI: 10.1016/j.plantsci.2024.112169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 06/16/2024] [Accepted: 06/18/2024] [Indexed: 06/26/2024]
3
Islam MT, Wang LC, Chen IJ, Lo KL, Lo WS. Arabidopsis JMJ17 promotes cotyledon greening during de-etiolation by repressing genes involved in tetrapyrrole biosynthesis in etiolated seedlings. THE NEW PHYTOLOGIST 2021;231:1023-1039. [PMID: 33666236 DOI: 10.1111/nph.17327] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 02/04/2021] [Indexed: 06/12/2023]
4
Cattaneo P, Graeff M, Marhava P, Hardtke CS. Conditional effects of the epigenetic regulator JUMONJI 14 in Arabidopsis root growth. Development 2019;146:146/23/dev183905. [PMID: 31826870 DOI: 10.1242/dev.183905] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Accepted: 11/18/2019] [Indexed: 01/06/2023]
5
The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in Arabidopsis. PLoS Genet 2019;15:e1008068. [PMID: 30969965 PMCID: PMC6457497 DOI: 10.1371/journal.pgen.1008068] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2018] [Accepted: 03/06/2019] [Indexed: 11/19/2022]  Open
6
Song T, Zhang Q, Wang H, Han J, Xu Z, Yan S, Zhu Z. OsJMJ703, a rice histone demethylase gene, plays key roles in plant development and responds to drought stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018;132:183-188. [PMID: 30212759 DOI: 10.1016/j.plaphy.2018.09.007] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2018] [Revised: 09/04/2018] [Accepted: 09/05/2018] [Indexed: 05/26/2023]
7
Lee K, Park OS, Seo PJ. JMJ30-mediated demethylation of H3K9me3 drives tissue identity changes to promote callus formation in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018;95:961-975. [PMID: 29923261 DOI: 10.1111/tpj.14002] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2017] [Revised: 06/04/2018] [Accepted: 06/08/2018] [Indexed: 05/20/2023]
8
Dutta A, Choudhary P, Caruana J, Raina R. JMJ27, an Arabidopsis H3K9 histone demethylase, modulates defense against Pseudomonas syringae and flowering time. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2017;91:1015-1028. [PMID: 28650521 DOI: 10.1111/tpj.13623] [Citation(s) in RCA: 66] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Revised: 05/12/2017] [Accepted: 06/19/2017] [Indexed: 05/17/2023]
9
Temperature influences histone methylation and mRNA expression of the Jmj-C histone-demethylase orthologues during the early development of the oyster Crassostrea gigas. Mar Genomics 2015;19:23-30. [DOI: 10.1016/j.margen.2014.09.002] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2014] [Revised: 09/03/2014] [Accepted: 09/04/2014] [Indexed: 01/08/2023]
10
Gan ES, Xu Y, Ito T. Dynamics of H3K27me3 methylation and demethylation in plant development. PLANT SIGNALING & BEHAVIOR 2015;10:e1027851. [PMID: 26313233 PMCID: PMC4883920 DOI: 10.1080/15592324.2015.1027851] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Accepted: 03/06/2015] [Indexed: 05/23/2023]
11
Jumonji demethylases moderate precocious flowering at elevated temperature via regulation of FLC in Arabidopsis. Nat Commun 2014;5:5098. [DOI: 10.1038/ncomms6098] [Citation(s) in RCA: 103] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Accepted: 08/27/2014] [Indexed: 01/27/2023]  Open
12
Yan Y, Shen L, Chen Y, Bao S, Thong Z, Yu H. A MYB-domain protein EFM mediates flowering responses to environmental cues in Arabidopsis. Dev Cell 2014;30:437-48. [PMID: 25132385 DOI: 10.1016/j.devcel.2014.07.004] [Citation(s) in RCA: 97] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2014] [Revised: 06/28/2014] [Accepted: 07/09/2014] [Indexed: 11/18/2022]
13
Fellous A, Favrel P, Guo X, Riviere G. The Jumonji gene family in Crassostrea gigas suggests evolutionary conservation of Jmj-C histone demethylases orthologues in the oyster gametogenesis and development. Gene 2014;538:164-75. [DOI: 10.1016/j.gene.2013.12.016] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Revised: 11/09/2013] [Accepted: 12/07/2013] [Indexed: 11/17/2022]
14
Shen Y, Conde e Silva N, Audonnet L, Servet C, Wei W, Zhou DX. Over-expression of histone H3K4 demethylase gene JMJ15 enhances salt tolerance in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2014;5:290. [PMID: 25009544 PMCID: PMC4068201 DOI: 10.3389/fpls.2014.00290] [Citation(s) in RCA: 63] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Accepted: 06/04/2014] [Indexed: 05/20/2023]
15
Gan ES, Huang J, Ito T. Functional Roles of Histone Modification, Chromatin Remodeling and MicroRNAs in Arabidopsis Flower Development. INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY 2013;305:115-61. [DOI: 10.1016/b978-0-12-407695-2.00003-2] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
16
Fan D, Dai Y, Wang X, Wang Z, He H, Yang H, Cao Y, Deng XW, Ma L. IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis. Nucleic Acids Res 2012;40:8905-16. [PMID: 22772985 PMCID: PMC3467047 DOI: 10.1093/nar/gks647] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]  Open
17
Yang H, Han Z, Cao Y, Fan D, Li H, Mo H, Feng Y, Liu L, Wang Z, Yue Y, Cui S, Chen S, Chai J, Ma L. A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression. PLoS Genet 2012;8:e1002664. [PMID: 22536163 PMCID: PMC3334889 DOI: 10.1371/journal.pgen.1002664] [Citation(s) in RCA: 81] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2011] [Accepted: 03/07/2012] [Indexed: 01/02/2023]  Open
18
Cho JN, Ryu JY, Jeong YM, Park J, Song JJ, Amasino RM, Noh B, Noh YS. Control of seed germination by light-induced histone arginine demethylation activity. Dev Cell 2012;22:736-48. [PMID: 22483719 DOI: 10.1016/j.devcel.2012.01.024] [Citation(s) in RCA: 92] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Revised: 01/06/2012] [Accepted: 01/31/2012] [Indexed: 01/11/2023]
19
Genome-wide evaluation of histone methylation changes associated with leaf senescence in Arabidopsis. PLoS One 2012;7:e33151. [PMID: 22427974 PMCID: PMC3299739 DOI: 10.1371/journal.pone.0033151] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2011] [Accepted: 02/10/2012] [Indexed: 01/05/2023]  Open
20
Reňák D, Dupl'áková N, Honys D. Wide-scale screening of T-DNA lines for transcription factor genes affecting male gametophyte development in Arabidopsis. ACTA ACUST UNITED AC 2011;25:39-60. [PMID: 22101548 DOI: 10.1007/s00497-011-0178-8] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2010] [Accepted: 11/06/2011] [Indexed: 12/29/2022]
21
Lu SX, Tobin EM. Chromatin remodeling and the circadian clock: Jumonji C-domain containing proteins. PLANT SIGNALING & BEHAVIOR 2011;6:810-4. [PMID: 21617366 PMCID: PMC3218477 DOI: 10.4161/psb.6.6.15171] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
22
Lu SX, Knowles SM, Webb CJ, Celaya RB, Cha C, Siu JP, Tobin EM. The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock. PLANT PHYSIOLOGY 2011;155:906-15. [PMID: 21139085 PMCID: PMC3032475 DOI: 10.1104/pp.110.167015] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2010] [Accepted: 12/02/2010] [Indexed: 05/18/2023]
23
Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. EMBO Rep 2010;11:950-5. [PMID: 21052090 PMCID: PMC2999860 DOI: 10.1038/embor.2010.158] [Citation(s) in RCA: 70] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2010] [Revised: 09/05/2010] [Accepted: 09/06/2010] [Indexed: 12/03/2022]  Open
24
Jeong JH, Song HR, Ko JH, Jeong YM, Kwon YE, Seol JH, Amasino RM, Noh B, Noh YS. Repression of FLOWERING LOCUS T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis. PLoS One 2009;4:e8033. [PMID: 19946624 PMCID: PMC2777508 DOI: 10.1371/journal.pone.0008033] [Citation(s) in RCA: 117] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2009] [Accepted: 10/30/2009] [Indexed: 11/19/2022]  Open
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