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Lampropoulos DS, Bourantas GC, Zwick BF, Kagadis GC, Wittek A, Miller K, Loukopoulos VC. Simulation of intracranial hemodynamics by an efficient and accurate immersed boundary scheme. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2021; 37:e3524. [PMID: 34448366 DOI: 10.1002/cnm.3524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
Abstract
We use computational fluid dynamics (CFD) to simulate blood flow in intracranial aneurysms (IAs). Despite ongoing improvements in the accuracy and efficiency of body-fitted CFD solvers, generation of a high quality mesh appears as the bottleneck of the flow simulation and strongly affects the accuracy of the numerical solution. To overcome this drawback, we use an immersed boundary method. The proposed approach solves the incompressible Navier-Stokes equations on a rectangular (box) domain discretized using uniform Cartesian grid using the finite element method. The immersed object is represented by a set of points (Lagrangian points) located on the surface of the object. Grid local refinement is applied using an automated algorithm. We verify and validate the proposed method by comparing our numerical findings with published experimental results and analytical solutions. We demonstrate the applicability of the proposed scheme on patient-specific blood flow simulations in IAs.
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Affiliation(s)
| | - George C Bourantas
- Intelligent Systems for Medicine Laboratory, The University of Western Australia, Perth, Australia
| | - Benjamin F Zwick
- Intelligent Systems for Medicine Laboratory, The University of Western Australia, Perth, Australia
| | - George C Kagadis
- Department of Medical Physics, School of Medicine, University of Patras, Rion, Greece
- Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA
| | - Adam Wittek
- Intelligent Systems for Medicine Laboratory, The University of Western Australia, Perth, Australia
| | - Karol Miller
- Intelligent Systems for Medicine Laboratory, The University of Western Australia, Perth, Australia
- Harvard Medical School, Harvard University, Boston, Massachusetts, USA
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Baldwin T, Battista NA. Hopscotching jellyfish: combining different duty cycle kinematics can lead to enhanced swimming performance. BIOINSPIRATION & BIOMIMETICS 2021; 16:066021. [PMID: 34584025 DOI: 10.1088/1748-3190/ac2afe] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 09/28/2021] [Indexed: 06/13/2023]
Abstract
Jellyfish (Medusozoa) have been deemed the most energy-efficient animals in the world. Their bell morphology and relatively simple nervous systems make them attractive to robotocists. Although, the science community has devoted much attention to understanding their swimming performance, there is still much to be learned about the jet propulsive locomotive gait displayed by prolate jellyfish. Traditionally, computational scientists have assumed uniform duty cycle kinematics when computationally modeling jellyfish locomotion. In this study we used fluid-structure interaction modeling to determine possible enhancements in performance from shuffling different duty cycles together across multiple Reynolds numbers and contraction frequencies. Increases in speed and reductions in cost of transport were observed as high as 80% and 50%, respectively. Generally, the net effects were greater for cases involving lower contraction frequencies. Overall, robust duty cycle combinations were determined that led to enhanced or impeded performance.
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Affiliation(s)
- Tierney Baldwin
- Department of Mathematics and Statistics, The College of New Jersey, 2000 Pennington Road, Ewing Township, NJ 08628, United States of America
| | - Nicholas A Battista
- Department of Mathematics and Statistics, The College of New Jersey, 2000 Pennington Road, Ewing Township, NJ 08628, United States of America
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Mei J, Yan F, Ni M, Wang H, Zhang F, Wang Z. Changes in intraarticular pressure on the blood supply in the retinaculum of the femoral neck. Clin Biomech (Bristol, Avon) 2019; 68:73-79. [PMID: 31158592 DOI: 10.1016/j.clinbiomech.2019.05.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Revised: 12/19/2018] [Accepted: 05/15/2019] [Indexed: 02/07/2023]
Abstract
BACKGROUND This study aimed to analyze the effects of intracapsular pressure (IAP) on blood flow in the femur after a femoral neck fracture. METHODS Four simplified vascular models were used to measure the effect of vessel length on arterial blood flow in 10 New Zealand white rabbits. Ten models were evaluated under 10 different blood pressures. FINDINGS IAP increased following fracture of the femoral neck, and deformation had the greatest potential effect on blood flow in the retinacular artery. When blood pressure was fixed at 60 mm Hg, an increase in IAP caused a reduction in blood flow. When the IAP was relatively high (above 60 mm Hg), and higher than the blood pressure, blood flow continued to drop as intracapsular pressure increased. Shortening of blood vessels had no significant effect on blood supply. However, the p-value was uniformly significant (<0.05) when stretched and twisted blood vessels were compared with normal blood vessels. INTERPRETATION The results of computational fluid-structure interaction similarly indicated that a smaller blood vessel diameter and twisted blood vessels will result in decreased flow velocity when IAP increases. This study also revealed a close relationship between IAP and the hip joint's position and traction.
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Affiliation(s)
- Jiong Mei
- Department of Orthopedic Surgery, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai 200233, China.
| | - Fei Yan
- Laboratory of Biomechanical Engineering, Department of Applied Mechanics, Sichuan University, Room 503, Yifu Science and Technology Building, Yihuan Road, Chengdu 610065, China; Interdisciplinary Division of Biomedical Engineering, The Hong Kong Polytechnic University, ST 405, No.11, Yuk Choi Road, Hung Hom, Kowloon 999077, Hong Kong, China
| | - Ming Ni
- Interdisciplinary Division of Biomedical Engineering, The Hong Kong Polytechnic University, ST 405, No.11, Yuk Choi Road, Hung Hom, Kowloon 999077, Hong Kong, China
| | - Hua Wang
- Department of Orthopaedics, Tongji Hospital, Tongji University School of Medicine, Shanghai 200065, China
| | - Fangfang Zhang
- Department of Orthopaedics, Tongji Hospital, Tongji University School of Medicine, Shanghai 200065, China
| | - Zhaobin Wang
- Department of Orthopaedics, Tongji Hospital, Tongji University School of Medicine, Shanghai 200065, China
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Grigoryan B, Paulsen SJ, Corbett DC, Sazer DW, Fortin CL, Zaita AJ, Greenfield PT, Calafat NJ, Gounley JP, Ta AH, Johansson F, Randles A, Rosenkrantz JE, Louis-Rosenberg JD, Galie PA, Stevens KR, Miller JS. Multivascular networks and functional intravascular topologies within biocompatible hydrogels. Science 2019; 364:458-464. [PMID: 31048486 PMCID: PMC7769170 DOI: 10.1126/science.aav9750] [Citation(s) in RCA: 793] [Impact Index Per Article: 132.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Accepted: 04/09/2019] [Indexed: 12/21/2022]
Abstract
Solid organs transport fluids through distinct vascular networks that are biophysically and biochemically entangled, creating complex three-dimensional (3D) transport regimes that have remained difficult to produce and study. We establish intravascular and multivascular design freedoms with photopolymerizable hydrogels by using food dye additives as biocompatible yet potent photoabsorbers for projection stereolithography. We demonstrate monolithic transparent hydrogels, produced in minutes, comprising efficient intravascular 3D fluid mixers and functional bicuspid valves. We further elaborate entangled vascular networks from space-filling mathematical topologies and explore the oxygenation and flow of human red blood cells during tidal ventilation and distension of a proximate airway. In addition, we deploy structured biodegradable hydrogel carriers in a rodent model of chronic liver injury to highlight the potential translational utility of this materials innovation.
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Affiliation(s)
- Bagrat Grigoryan
- Department of Bioengineering, Rice University, Houston, TX 77005, USA
| | | | - Daniel C Corbett
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
- Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98195, USA
| | - Daniel W Sazer
- Department of Bioengineering, Rice University, Houston, TX 77005, USA
| | - Chelsea L Fortin
- Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98195, USA
- Department of Pathology, University of Washington, Seattle, WA 98195, USA
| | - Alexander J Zaita
- Department of Bioengineering, Rice University, Houston, TX 77005, USA
| | - Paul T Greenfield
- Department of Bioengineering, Rice University, Houston, TX 77005, USA
| | | | - John P Gounley
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA
| | - Anderson H Ta
- Department of Bioengineering, Rice University, Houston, TX 77005, USA
| | - Fredrik Johansson
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
- Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98195, USA
| | - Amanda Randles
- Department of Biomedical Engineering, Duke University, Durham, NC 27708, USA
| | | | | | - Peter A Galie
- Department of Biomedical Engineering, Rowan University, Glassboro, NJ 08028, USA
| | - Kelly R Stevens
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
- Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA 98195, USA
- Department of Pathology, University of Washington, Seattle, WA 98195, USA
| | - Jordan S Miller
- Department of Bioengineering, Rice University, Houston, TX 77005, USA.
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Chakraborty S. Electrokinetics with blood. Electrophoresis 2018; 40:180-189. [DOI: 10.1002/elps.201800353] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Revised: 09/13/2018] [Accepted: 09/14/2018] [Indexed: 11/08/2022]
Affiliation(s)
- Suman Chakraborty
- Department of Mechanical Engineering; Indian Institute of Technology Kharagpur; Kharagpur India
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Rajani R, Wang Y, Uss A, Perera D, Redwood S, Thomas M, Chambers JB, Preston R, Carr-White GS, Liatsis P. Virtual fractional flow reserve by coronary computed tomography - hope or hype? EUROINTERVENTION 2013; 9:277-84. [DOI: 10.4244/eijv9i2a44] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Gao H, Claus P, Amzulescu MS, Stankovic I, D'hooge J, Voigt JU. How to optimize intracardiac blood flow tracking by echocardiographic particle image velocimetry? Exploring the influence of data acquisition using computer-generated data sets. Eur Heart J Cardiovasc Imaging 2011; 13:490-9. [DOI: 10.1093/ejechocard/jer285] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Xiong G, Figueroa CA, Xiao N, Taylor CA. Simulation of blood flow in deformable vessels using subject-specific geometry and spatially varying wall properties. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING 2011; 27:1000-1016. [PMID: 21765984 PMCID: PMC3137382 DOI: 10.1002/cnm.1404] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Simulation of blood flow using image-based models and computational fluid dynamics has found widespread application to quantifying hemodynamic factors relevant to the initiation and progression of cardiovascular diseases and for planning interventions. Methods for creating subject-specific geometric models from medical imaging data have improved substantially in the last decade but for many problems, still require significant user interaction. In addition, while fluid-structure interaction methods are being employed to model blood flow and vessel wall dynamics, tissue properties are often assumed to be uniform. In this paper, we propose a novel workflow for simulating blood flow using subject-specific geometry and spatially varying wall properties. The geometric model construction is based on 3D segmentation and geometric processing. Variable wall properties are assigned to the model based on combining centerline-based and surface-based methods. We finally demonstrate these new methods using an idealized cylindrical model and two subject-specific vascular models with thoracic and cerebral aneurysms.
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